Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1258.1 Carica papaya HOM05D000003 ORTHO05D000006 4.5e-31 137.1 62 100.0
Cpa.g.c46888 Carica papaya HOM05D000003 ORTHO05D000006 2.5e-21 104.8 62 72.6
CANSAT01G0793 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-13 76.3 59 50.8
CANSAT56G0265 Cannabis sativa HOM05D000003 ORTHO05D000006 2.8e-12 74.7 59 49.2
CANSAT56G0110 Cannabis sativa HOM05D000003 ORTHO05D000006 4.7e-12 73.9 62 45.2
CANSAT80G2461 Cannabis sativa HOM05D000003 ORTHO05D000006 4.7e-12 73.9 58 50.0
CANSAT35G1728 Cannabis sativa HOM05D000003 ORTHO05D000004 6.2e-12 73.6 59 49.2
CANSAT54G1259 Cannabis sativa HOM05D000003 ORTHO05D000004 8.1e-12 73.2 59 49.2
CANSAT01G3218 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-11 72.8 59 47.5
CANSAT54G0414 Cannabis sativa HOM05D000003 ORTHO05D000006 1.1e-11 72.8 59 47.5
CANSAT56G4250 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-11 72.8 58 46.6
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-11 72.8 59 50.8
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-11 72.4 59 45.8
CANSAT11G0437 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-11 72.0 61 44.3
CANSAT64G0810 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-11 71.6 55 49.1
CANSAT64G0903 Cannabis sativa HOM05D000003 ORTHO05D000006 2.3e-11 71.6 59 45.8
CANSAT01G2311 Cannabis sativa HOM05D000003 ORTHO05D000006 4.0e-11 70.9 55 49.1
CANSAT25G1377 Cannabis sativa HOM05D000003 ORTHO05D000006 5.2e-11 70.5 60 43.3
CANSAT25G2690 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-11 70.5 61 47.5
CANSAT35G1541 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-11 70.5 57 47.4
CANSAT56G0533 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-11 70.1 59 44.1
CANSAT80G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-11 70.1 59 45.8
Lj4P801T16 Lonicera japonica HOM05D000003 ORTHO05D000006 6.8e-11 70.1 60 50.0
CANSAT54G2152 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-10 69.3 63 44.4
Manes.14G108366 Manihot esculenta HOM05D000003 ORTHO05D000006 1.2e-10 69.3 62 48.4
Potri.002G000350 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.2e-10 69.3 56 50.0
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-10 68.9 59 40.7
CANSAT25G3782 Cannabis sativa HOM05D000003 ORTHO05D000006 1.5e-10 68.9 59 42.4
CANSAT35G0803 Cannabis sativa HOM05D000003 ORTHO05D000006 1.5e-10 68.9 59 39.0
CANSAT80G0262 Cannabis sativa HOM05D000003 ORTHO05D000006 1.5e-10 68.9 54 50.0
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-10 68.6 59 44.1
CANSAT21G0602 Cannabis sativa HOM05D000003 ORTHO05D000006 2.6e-10 68.2 59 45.8
CANSAT56G4053 Cannabis sativa HOM05D000003 ORTHO05D000006 2.6e-10 68.2 59 39.0
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 2.6e-10 68.2 51 51.0
CANSAT01G1595 Cannabis sativa HOM05D000003 ORTHO05D000006 3.4e-10 67.8 62 43.5
CANSAT01G2836 Cannabis sativa HOM05D000003 ORTHO05D000126 3.4e-10 67.8 60 43.3
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-10 67.8 59 39.0
CANSAT21G1214 Cannabis sativa HOM05D000003 ORTHO05D000006 3.4e-10 67.8 60 41.7
CANSAT25G2411 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-10 67.8 59 40.7
Manes.16G068101 Manihot esculenta HOM05D000003 ORTHO05D000006 3.4e-10 67.8 61 45.9
CANSAT21G2319 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-10 67.4 56 48.2
CANSAT64G2324 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-10 67.4 61 37.7
Manes.06G103266 Manihot esculenta HOM05D000003 ORTHO05D000004 4.4e-10 67.4 62 46.8
CANSAT25G1351 Cannabis sativa HOM05D000003 ORTHO05D000006 5.8e-10 67.0 63 42.9
CANSAT25G3037 Cannabis sativa HOM05D000003 ORTHO05D000006 5.8e-10 67.0 59 44.1
CANSAT56G1931 Cannabis sativa HOM05D000003 ORTHO05D000004 5.8e-10 67.0 61 41.0
CANSAT56G2299 Cannabis sativa HOM05D000003 ORTHO05D000004 5.8e-10 67.0 57 47.4
CANSAT21G0495 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-10 66.6 55 47.3
CANSAT21G1152 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-10 66.6 56 41.1
CANSAT80G2809 Cannabis sativa HOM05D000003 ORTHO05D000006 7.5e-10 66.6 59 37.3
Manes.13G023901 Manihot esculenta HOM05D000003 ORTHO05D000006 7.5e-10 66.6 58 46.6
Nn3g17029 Nelumbo nucifera HOM05D000003 ORTHO05D000006 7.5e-10 66.6 53 49.1
CANSAT35G1149 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-10 66.2 59 44.1
CANSAT64G2969 Cannabis sativa HOM05D000003 ORTHO05D000006 9.8e-10 66.2 59 37.3
CANSAT78G1758 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-10 66.2 59 44.1
CANSAT54G0843 Cannabis sativa HOM05D000003 ORTHO05D000006 1.3e-09 65.9 60 45.0
CANSAT54G1425 Cannabis sativa HOM05D000003 ORTHO05D000006 1.3e-09 65.9 61 47.5
CANSAT64G1542 Cannabis sativa HOM05D000003 ORTHO05D000006 1.3e-09 65.9 57 45.6
CANSAT21G0732 Cannabis sativa HOM05D000003 ORTHO05D000006 1.7e-09 65.5 62 41.9
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-09 65.5 55 45.5
CANSAT64G0189 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-09 65.5 61 39.3
Lj6C88T5 Lonicera japonica HOM05D000003 ORTHO05D000006 1.7e-09 65.5 55 50.9
CANSAT01G1261 Cannabis sativa HOM05D000003 ORTHO05D000006 2.2e-09 65.1 54 48.1
CANSAT54G0463 Cannabis sativa HOM05D000003 ORTHO05D000006 2.2e-09 65.1 54 50.0
CANSAT54G0761 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-09 65.1 59 42.4
CANSAT56G1952 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-09 65.1 61 44.3
CANSAT64G0360 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-09 65.1 56 46.4
CANSAT78G2353 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-09 65.1 59 47.5
CANSAT01G2163 Cannabis sativa HOM05D000003 ORTHO05D000126 2.9e-09 64.7 59 44.1
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-09 64.7 59 39.0
CANSAT78G1210 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-09 64.7 59 42.4
CANSAT11G1881 Cannabis sativa HOM05D000003 ORTHO05D000006 3.7e-09 64.3 61 39.3
CANSAT25G2525 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-09 64.3 59 40.7
CANSAT56G2039 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-09 64.3 59 40.7
CANSAT64G1355 Cannabis sativa HOM05D000003 ORTHO05D000006 3.7e-09 64.3 63 41.3
Manes.01G065050 Manihot esculenta HOM05D000003 ORTHO05D000006 4.9e-09 63.9 62 45.2
CANSAT13G0005 Cannabis sativa HOM05D000003 ORTHO05D000006 6.4e-09 63.5 55 43.6
CANSAT54G2918 Cannabis sativa HOM05D000003 ORTHO05D000006 6.4e-09 63.5 63 42.9
SHI02062 Sapria himalayana HOM05D000003 ORTHO05D000004 6.4e-09 63.5 50 46.0
CANSAT78G1656 Cannabis sativa HOM05D000003 ORTHO05D000006 8.3e-09 63.2 62 40.3
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-08 62.8 57 42.1
CANSAT80G0065 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-08 62.8 57 40.4
CANSAT80G2702 Cannabis sativa HOM05D000003 ORTHO05D000006 1.1e-08 62.8 59 40.7
Manes.05G130301 Manihot esculenta HOM05D000003 ORTHO05D000004 1.1e-08 62.8 58 48.3
CANSAT01G0387 Cannabis sativa HOM05D000003 ORTHO05D000006 1.4e-08 62.4 59 39.0
CANSAT01G1362 Cannabis sativa HOM05D000003 ORTHO05D000006 1.4e-08 62.4 58 39.7
CANSAT01G1615 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-08 62.4 59 44.1
CANSAT78G0953 Cannabis sativa HOM05D000003 ORTHO05D000006 1.4e-08 62.4 61 37.7
Manes.11G088678 Manihot esculenta HOM05D000003 ORTHO05D000006 1.9e-08 62.0 58 46.6
Sopen03g020890 Solanum pennellii HOM05D000003 ORTHO05D000006 1.9e-08 62.0 58 41.4
CANSAT11G2283 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-08 61.6 59 40.7
Lj2P943T7 Lonicera japonica HOM05D000003 ORTHO05D000006 2.4e-08 61.6 59 42.4
Medtr2g018005 Medicago truncatula HOM05D000003 ORTHO05D000006 2.4e-08 61.6 61 45.9
CANSAT01G2337 Cannabis sativa HOM05D000003 ORTHO05D000006 3.2e-08 61.2 59 40.7
CANSAT01G2780 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-08 61.2 50 44.0
CANSAT21G1305 Cannabis sativa HOM05D000003 ORTHO05D000006 3.2e-08 61.2 59 45.8
CANSAT64G2379 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-08 61.2 59 45.8
Nn8g41081 Nelumbo nucifera HOM05D000003 ORTHO05D000004 3.2e-08 61.2 55 45.5
CANSAT21G0729 Cannabis sativa HOM05D000003 ORTHO05D000006 5.4e-08 60.5 61 37.7
CANSAT21G2433 Cannabis sativa HOM05D000003 ORTHO05D000006 5.4e-08 60.5 59 39.0
Manes.02G206350 Manihot esculenta HOM05D000003 ORTHO05D000006 5.4e-08 60.5 56 48.2
Potri.004G117750 Populus trichocarpa HOM05D000003 ORTHO05D000006 5.4e-08 60.5 60 48.3
CANSAT01G2119 Cannabis sativa HOM05D000003 ORTHO05D000006 7.1e-08 60.1 61 37.7
CANSAT56G0006 Cannabis sativa HOM05D000003 ORTHO05D000006 7.1e-08 60.1 57 40.4
CANSAT56G1157 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-08 60.1 52 36.5
CANSAT56G1890 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-08 60.1 61 39.3
CANSAT56G3772 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-08 60.1 59 45.8
CANSAT64G1116 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-08 60.1 59 42.4
CANSAT64G1939 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-08 60.1 55 40.0
CANSAT35G0331 Cannabis sativa HOM05D000003 ORTHO05D000004 9.2e-08 59.7 55 40.0
CANSAT54G0890 Cannabis sativa HOM05D000003 ORTHO05D000004 9.2e-08 59.7 60 35.0
Medtr4g020630 Medicago truncatula HOM05D000003 ORTHO05D000006 1.2e-07 59.3 62 41.9
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 58.9 55 41.8
Manes.08G094111 Manihot esculenta HOM05D000003 ORTHO05D000006 1.6e-07 58.9 56 44.6
Medtr8g463110 Medicago truncatula HOM05D000003 ORTHO05D000004 1.6e-07 58.9 58 44.8
CANSAT11G0192 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 58.5 57 40.4
CANSAT11G1313 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 58.5 57 40.4
CANSAT21G1935 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 58.5 61 32.8
CANSAT25G1225 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 58.5 57 40.4
CANSAT25G1969 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 58.5 59 40.7
CANSAT35G0246 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 58.5 55 38.2
CANSAT35G0465 Cannabis sativa HOM05D000003 ORTHO05D000006 2.1e-07 58.5 62 33.9
CANSAT35G1937 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-07 58.2 59 42.4
CANSAT54G1077 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-07 58.2 54 44.4
CANSAT54G1916 Cannabis sativa HOM05D000003 ORTHO05D000006 3.5e-07 57.8 61 34.4
CANSAT64G1006 Cannabis sativa HOM05D000003 ORTHO05D000006 3.5e-07 57.8 54 44.4
CANSAT80G0272 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-07 57.8 55 43.6
Medtr8g470880 Medicago truncatula HOM05D000003 ORTHO05D000006 4.6e-07 57.4 60 48.3
CANSAT01G3288 Cannabis sativa HOM05D000003 ORTHO05D000006 6.0e-07 57.0 59 37.3
Medtr3g044860 Medicago truncatula HOM05D000003 ORTHO05D000006 6.0e-07 57.0 62 41.9
CANSAT25G0762 Cannabis sativa HOM05D000003 ORTHO05D000004 7.8e-07 56.6 59 40.7
CANSAT78G2124 Cannabis sativa HOM05D000003 ORTHO05D000004 7.8e-07 56.6 59 40.7
Medtr0042s0130 Medicago truncatula HOM05D000003 ORTHO05D000006 7.8e-07 56.6 59 40.7
Medtr6g034715 Medicago truncatula HOM05D000003 ORTHO05D000006 1.0e-06 56.2 58 41.4
Medtr2g055450 Medicago truncatula HOM05D000003 ORTHO05D000006 1.3e-06 55.8 61 39.3
Manes.09G090221 Manihot esculenta HOM05D000003 ORTHO05D000006 2.3e-06 55.1 57 40.4
Medtr6g034215 Medicago truncatula HOM05D000003 ORTHO05D000006 2.3e-06 55.1 59 42.4
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.3e-06 55.1 47 46.8
Manes.09G066957 Manihot esculenta HOM05D000003 ORTHO05D000006 3.0e-06 54.7 56 41.1
CANSAT35G1027 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-06 54.3 59 37.3
CANSAT80G2477 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-06 54.3 62 33.9
CANSAT25G0902 Cannabis sativa HOM05D000003 ORTHO05D000006 5.1e-06 53.9 54 40.7
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 5.1e-06 53.9 62 37.1
Medtr0114s0080 Medicago truncatula HOM05D000003 ORTHO05D000006 5.1e-06 53.9 60 43.3
Medtr1g108333 Medicago truncatula HOM05D000003 ORTHO05D000006 5.1e-06 53.9 62 37.1
CANSAT01G1428 Cannabis sativa HOM05D000003 ORTHO05D000004 6.6e-06 53.5 45 44.4
SHI26205 Sapria himalayana HOM05D000003 ORTHO05D000006 6.6e-06 53.5 57 38.6
CANSAT64G2432 Cannabis sativa HOM05D000003 ORTHO05D000004 8.6e-06 53.1 40 52.5
CiPaw.11G121200 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.6e-06 53.1 57 45.6
Medtr1g100687 Medicago truncatula HOM05D000003 ORTHO05D000006 8.6e-06 53.1 62 38.7


User provided reference genes

Program Settings