Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1241.2 Carica papaya HOM05D005658 ORTHO05D006989 4.0e-72 274.6 135 100.0
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 5.6e-58 227.6 133 81.2
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 1.4e-56 223.0 133 79.7
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 2.3e-56 222.2 133 78.2
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 2.3e-56 222.2 133 78.2
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 4.0e-56 221.5 133 78.9
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 8.9e-56 220.3 133 78.2
Duzib235G1329 Durio zibethinus HOM05D005658 ORTHO05D006989 4.4e-55 218.0 133 76.7
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 7.5e-55 217.2 133 76.7
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 7.5e-55 217.2 133 77.4
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 1.3e-54 216.5 133 76.7
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 2.2e-54 215.7 133 75.2
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 2.2e-54 215.7 133 75.9
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 3.7e-54 214.9 133 73.7
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 6.4e-54 214.2 133 75.9
COL.COLO4_30457 Corchorus olitorius HOM05D005658 ORTHO05D006989 8.3e-54 213.8 132 77.3
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 8.3e-54 213.8 133 75.2
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 1.9e-53 212.6 133 74.4
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 2.4e-53 212.2 133 75.2
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 3.2e-53 211.8 133 75.2
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 3.2e-53 211.8 133 77.4
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 4.1e-53 211.5 134 76.1
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 5.4e-53 211.1 133 75.9
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 9.2e-53 210.3 133 73.7
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 2.7e-52 208.8 133 73.7
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 3.5e-52 208.4 133 75.9
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 4.6e-52 208.0 131 75.6
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 6.0e-52 207.6 132 73.5
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 6.0e-52 207.6 130 74.6
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 7.8e-52 207.2 134 73.1
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 1.3e-51 206.5 133 72.9
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 1.7e-51 206.1 132 74.2
Psat5g078360 Pisum sativum HOM05D005658 ORTHO05D006989 1.7e-51 206.1 133 73.7
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 3.0e-51 205.3 133 75.2
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 3.0e-51 205.3 133 72.2
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 3.0e-51 205.3 133 73.7
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 5.0e-51 204.5 134 72.4
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 6.6e-51 204.1 133 73.7
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 6.6e-51 204.1 134 72.4
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 8.6e-51 203.8 132 74.2
Haze_16346 Corylus avellana HOM05D005658 ORTHO05D006989 1.1e-50 203.4 133 74.4
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 2.5e-50 202.2 134 70.9
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 4.3e-50 201.4 133 71.4
Aqoxy7G01547 Aquilegia oxysepala HOM05D005658 ORTHO05D006989 5.6e-50 201.1 132 72.0
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 9.5e-50 200.3 134 72.4
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 9.5e-50 200.3 132 73.5
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 1.2e-49 199.9 133 73.7
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 1.6e-49 199.5 132 73.5
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 1.6e-49 199.5 134 69.4
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 1.6e-49 199.5 133 72.2
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 2.8e-49 198.7 133 71.4
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 2.8e-49 198.7 133 73.7
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 3.6e-49 198.4 133 69.9
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 6.2e-49 197.6 133 72.2
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 6.2e-49 197.6 130 74.6
Lsat_1_v5_gn_5_131001 Lactuca sativa HOM05D000012 ORTHO05D000804 1.1e-48 196.8 127 74.8
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 1.1e-48 196.8 133 69.9
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 1.8e-48 196.1 134 69.4
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 3.1e-48 195.3 130 73.8
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 3.1e-48 195.3 130 70.8
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 3.1e-48 195.3 132 72.7
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 5.2e-48 194.5 133 72.2
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 5.2e-48 194.5 131 71.8
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 8.9e-48 193.7 131 71.8
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 1.2e-47 193.4 133 72.2
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 1.2e-47 193.4 130 73.1
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.5e-47 193.0 130 72.3
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 2.6e-47 192.2 135 68.9
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 2.6e-47 192.2 131 71.0
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 7.5e-47 190.7 130 72.3
C05p50310 Brassica napus HOM05D005658 ORTHO05D006989 1.3e-46 189.9 135 68.9
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 1.3e-46 189.9 131 70.2
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.3e-46 189.9 133 64.7
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 1.7e-46 189.5 130 70.8
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 2.9e-46 188.7 129 70.5
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 8.3e-46 187.2 133 70.7
BraA05t22156Z Brassica rapa HOM05D005658 ORTHO05D006989 1.9e-45 186.0 143 65.7
Glyma.08G203700 Glycine max HOM05D005658 ORTHO05D006989 2.4e-45 185.7 118 75.4
VMungo0331G0597 Vigna mungo HOM05D005658 ORTHO05D006989 3.2e-45 185.3 133 68.4
AUR62011683 Chenopodium quinoa HOM05D005658 ORTHO05D006989 5.4e-45 184.5 133 66.2
Sed0018991 Sechium edule HOM05D005658 ORTHO05D006989 7.1e-45 184.1 133 64.7
ClCG09G001890 Citrullus lanatus HOM05D005658 ORTHO05D006989 9.2e-45 183.7 133 65.4
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 1.2e-44 183.3 145 64.1
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 1.2e-44 183.3 133 63.9
DCAR_016205 Daucus carota HOM05D005658 ORTHO05D006989 1.6e-44 183.0 129 69.8
Migut.D01014 Erythranthe guttata HOM05D005658 ORTHO05D006989 2.1e-44 182.6 131 71.0
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 2.7e-44 182.2 133 62.4
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 4.6e-44 181.4 133 67.7
HanXRQChr10g0313501 Helianthus annuus HOM05D005658 ORTHO05D006989 4.6e-44 181.4 126 70.6
MBI04_g04855_MAGBIO Magnolia biondii HOM05D005658 ORTHO05D006989 6.0e-44 181.0 125 68.0
Phvul.010G147800 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 6.0e-44 181.0 133 66.9
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 6.0e-44 181.0 130 67.7
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 6.0e-44 181.0 130 64.6
MELO3C027085.2 Cucumis melo HOM05D005658 ORTHO05D006989 1.7e-43 179.5 126 69.0
PSO210G2136 Papaver somniferum HOM05D005658 ORTHO05D006989 2.3e-43 179.1 133 64.7
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 3.9e-43 178.3 131 63.4
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 6.6e-43 177.6 126 69.8
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 8.6e-43 177.2 117 76.9
AUR62016508 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.9e-42 176.0 152 59.9
SEGI_12338 Sequoiadendron giganteum HOM05D005658 ORTHO05D006989 2.5e-42 175.6 129 63.6
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea HOM05D005658 ORTHO05D006989 3.3e-42 175.3 132 67.4
Dinv38010 Davidia involucrata HOM05D005658 ORTHO05D006989 3.3e-42 175.3 108 75.0
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 4.3e-42 174.9 130 63.8
PSO210G3060 Papaver somniferum HOM05D005658 ORTHO05D006989 7.3e-42 174.1 131 65.6
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 1.6e-41 172.9 133 64.7
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 3.1e-40 168.7 133 60.9
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 6.8e-40 167.5 127 62.2
COL.COLO4_18473 Corchorus olitorius HOM05D005658 ORTHO05D006989 1.2e-39 166.8 128 64.1
FAN05G4480 Fragaria x ananassa HOM05D005658 ORTHO05D006989 1.2e-39 166.8 112 74.1
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 2.6e-39 165.6 132 62.9
Sc12g0009500 Simmondsia chinensis HOM05D005658 ORTHO05D006989 4.4e-39 164.9 116 69.8
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 6.4e-38 161.0 131 56.5
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 1.2e-36 156.8 133 58.6
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 4.6e-36 154.8 106 68.9
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 4.6e-36 154.8 119 63.9
Nitab4.5_0001968g0140 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.0e-35 153.7 131 64.9
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 2.3e-35 152.5 110 65.5
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 3.0e-35 152.1 130 55.4
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 3.9e-35 151.8 133 58.6
Os02g0276200 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 1.1e-34 150.2 120 65.0
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 5.2e-32 141.4 132 56.8
Haze_16345 Corylus avellana HOM05D003600 ORTHO05D004129 5.2e-32 141.4 81 80.2
Manes.11G037100 Manihot esculenta HOM05D005658 ORTHO05D006989 2.0e-31 139.4 118 60.2
Peaxi162Scf00015g00132 Petunia axillaris HOM05D005658 ORTHO05D006989 3.2e-29 132.1 130 52.3
Psat5g078240 Pisum sativum HOM05D005658 ORTHO05D006989 7.1e-29 131.0 133 51.9
TPR.G40810 Trifolium pratense HOM05D005658 ORTHO05D006989 9.3e-29 130.6 79 75.9
Psat7g255080 Pisum sativum HOM05D005658 ORTHO05D006989 3.5e-28 128.6 79 74.7
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 5.6e-26 121.3 130 47.7
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 5.8e-23 111.3 132 47.7
CAN.G214.3 Capsicum annuum HOM05D005658 ORTHO05D006989 9.9e-23 110.5 78 69.2
AUR62011684 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.9e-21 106.3 133 44.4
Nitab4.5_0003039g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 8.7e-19 97.4 131 46.6
Atru.chr1.3413 Acer truncatum HOM05D005658 ORTHO05D006989 1.5e-18 96.7 57 77.2
QL02p037511 Quercus lobata HOM05D005658 ORTHO05D006989 1.5e-18 96.7 60 75.0
Atru.chr1.3414 Acer truncatum HOM05D005658 ORTHO05D006989 2.0e-15 86.3 52 71.2
Peaxi162Scf00015g00131 Petunia axillaris HOM05D005658 ORTHO05D006989 4.9e-14 81.6 130 37.7
TPR.G1351 Trifolium pratense HOM05D005658 ORTHO05D006989 1.1e-13 80.5 58 63.8
Sopen12g022580 Solanum pennellii HOM05D005658 ORTHO05D006989 4.8e-09 65.1 52 67.3
Zm00001eb237290 Zea mays HOM05D005658 ORTHO05D006989 2.4e-08 62.8 56 57.1


User provided reference genes

Program Settings