Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 6.8e-108 394.0 203 100.0
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 4.3e-54 215.3 184 62.5
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 6.2e-53 211.5 172 64.0
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 2.4e-52 209.5 192 60.9
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 3.1e-52 209.1 148 70.9
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 4.4e-51 205.3 178 61.8
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 2.2e-50 203.0 178 61.2
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 2.9e-50 202.6 197 55.8
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 6.4e-50 201.4 178 60.7
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 6.4e-50 201.4 178 60.7
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 1.9e-49 199.9 178 58.4
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 3.2e-49 199.1 180 61.1
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 7.1e-49 198.0 188 56.4
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 1.2e-48 197.2 141 68.8
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 2.1e-48 196.4 177 57.6
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 3.5e-48 195.7 183 59.6
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 4.6e-48 195.3 173 60.7
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 6.0e-48 194.9 177 58.8
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 6.0e-48 194.9 178 57.3
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 7.9e-48 194.5 186 58.1
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 1.0e-47 194.1 187 56.7
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 1.0e-47 194.1 179 58.7
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 1.3e-47 193.7 180 56.7
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 2.3e-47 193.0 182 57.1
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 3.9e-47 192.2 150 63.3
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 6.6e-47 191.4 188 57.4
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 1.1e-46 190.7 178 56.2
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 2.5e-46 189.5 188 58.0
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 2.5e-46 189.5 188 56.9
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 3.3e-46 189.1 185 56.2
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 1.3e-45 187.2 141 66.0
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 1.6e-45 186.8 170 60.0
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 2.1e-45 186.4 184 55.4
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 2.1e-45 186.4 188 56.4
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 3.6e-45 185.7 177 54.2
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 4.8e-45 185.3 177 54.2
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 6.2e-45 184.9 188 53.2
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 6.9e-44 181.4 139 66.9
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 1.2e-43 180.6 175 56.6
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 2.0e-43 179.9 137 65.0
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 3.4e-43 179.1 140 62.9
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.5e-43 178.7 181 51.9
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.5e-43 178.7 181 51.4
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 1.3e-42 177.2 179 55.3
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.7e-42 176.8 149 59.1
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 4.9e-42 175.3 142 64.1
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 8.4e-42 174.5 184 51.6
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 1.1e-41 174.1 144 63.2
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 1.1e-41 174.1 178 51.7
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 1.4e-41 173.7 178 53.4
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 2.4e-41 172.9 180 54.4
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 3.2e-41 172.6 185 53.5
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 3.2e-41 172.6 182 51.1
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 4.2e-41 172.2 175 49.7
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 5.5e-41 171.8 145 58.6
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 5.5e-41 171.8 145 58.6
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 9.3e-41 171.0 182 52.7
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 9.3e-41 171.0 179 52.5
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 9.3e-41 171.0 179 52.5
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 1.2e-40 170.6 171 53.2
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 1.2e-40 170.6 144 58.3
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 1.2e-40 170.6 179 52.5
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 2.1e-40 169.9 149 56.4
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 7.9e-40 167.9 178 51.1
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 1.3e-39 167.2 174 49.4
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 1.3e-39 167.2 177 53.1
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 1.8e-39 166.8 172 52.3
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 2.3e-39 166.4 182 55.5
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 5.1e-39 165.2 140 60.7
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 1.1e-38 164.1 170 50.6
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 2.5e-38 162.9 171 50.9
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 3.3e-38 162.5 136 61.8
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 5.6e-38 161.8 129 60.5
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 2.8e-37 159.5 190 48.4
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 3.7e-37 159.1 179 47.5
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 6.2e-37 158.3 205 46.3
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 8.1e-37 157.9 167 52.1
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 2.2e-34 149.8 112 66.1
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.9e-33 146.7 141 56.0
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.2e-33 146.0 128 57.0
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 7.9e-32 141.4 171 47.4
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 7.9e-32 141.4 148 53.4
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 8.7e-31 137.9 157 44.6
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 1.9e-30 136.7 154 50.0
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 9.6e-30 134.4 116 55.2
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 9.6e-30 134.4 113 60.2
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 2.8e-29 132.9 109 61.5
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 9.0e-28 127.9 110 57.3
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 4.5e-27 125.6 110 56.4
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.2e-24 117.5 86 70.9
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 2.8e-21 106.3 95 55.8
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.8e-21 105.5 119 49.6
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 5.9e-19 98.6 128 43.8
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 2.2e-18 96.7 71 66.2
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 4.2e-17 92.4 92 53.3
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 5.5e-17 92.0 140 37.1
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.6e-16 90.5 84 53.6
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 1.1e-14 84.3 123 38.2
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 2.0e-14 83.6 89 48.3
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 6.3e-13 78.6 73 49.3
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 6.3e-13 78.6 110 39.1


User provided reference genes

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