Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 1.7e-122 442.6 209 100.0
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 1.5e-78 296.6 176 74.4
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 4.4e-78 295.0 193 72.0
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 1.7e-77 293.1 183 72.7
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.1e-76 288.5 165 76.4
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.1e-76 288.5 165 76.4
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 3.5e-75 285.4 161 77.0
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 4.5e-75 285.0 168 74.4
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 1.7e-74 283.1 213 63.8
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 2.3e-74 282.7 191 69.1
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 2.3e-74 282.7 197 67.5
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 3.9e-74 282.0 181 69.6
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 3.9e-74 282.0 161 75.2
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 6.6e-74 281.2 168 74.4
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 2.5e-73 279.3 183 68.3
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 2.5e-73 279.3 196 66.8
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 2.5e-73 279.3 161 76.4
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 3.3e-73 278.9 209 64.1
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.3e-73 278.5 209 64.1
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 4.3e-73 278.5 183 68.3
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 5.6e-73 278.1 169 74.0
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 7.3e-73 277.7 161 76.4
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 7.3e-73 277.7 168 73.8
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 7.3e-73 277.7 217 60.8
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 9.5e-73 277.3 200 65.5
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 2.1e-72 276.2 168 73.8
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 2.1e-72 276.2 168 73.8
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.1e-72 276.2 161 73.3
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 2.8e-72 275.8 161 73.9
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 3.6e-72 275.4 187 66.8
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 3.6e-72 275.4 179 68.2
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 3.6e-72 275.4 161 77.0
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 4.7e-72 275.0 161 75.8
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 4.7e-72 275.0 183 67.8
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 6.1e-72 274.6 168 71.4
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 6.1e-72 274.6 178 68.0
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 8.0e-72 274.2 161 75.8
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 1.0e-71 273.9 168 72.0
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 1.4e-71 273.5 161 72.7
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 1.4e-71 273.5 161 72.7
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.8e-71 273.1 180 69.4
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 2.3e-71 272.7 171 71.3
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 2.3e-71 272.7 196 64.3
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 2.3e-71 272.7 161 73.9
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 2.3e-71 272.7 168 72.6
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 3.1e-71 272.3 180 69.4
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 3.1e-71 272.3 167 71.9
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 4.0e-71 271.9 201 62.7
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 5.2e-71 271.6 185 66.5
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 5.2e-71 271.6 188 62.8
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 6.8e-71 271.2 196 65.3
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 6.8e-71 271.2 199 65.8
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 8.9e-71 270.8 202 63.4
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 8.9e-71 270.8 171 71.9
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 8.9e-71 270.8 167 71.3
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 1.2e-70 270.4 196 63.8
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 1.2e-70 270.4 184 66.8
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 1.5e-70 270.0 161 73.3
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 2.6e-70 269.2 209 62.2
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 2.6e-70 269.2 190 65.8
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.4e-70 268.5 218 61.0
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 5.8e-70 268.1 161 73.9
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 5.8e-70 268.1 177 70.1
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 5.8e-70 268.1 168 72.0
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 7.5e-70 267.7 169 70.4
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 7.5e-70 267.7 161 72.0
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 7.5e-70 267.7 169 68.0
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 1.3e-69 266.9 177 69.5
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.7e-69 266.5 168 70.8
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.7e-69 266.5 161 74.5
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 6.4e-69 264.6 205 60.5
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 8.3e-69 264.2 182 67.6
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.1e-68 263.8 175 68.0
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 1.1e-68 263.8 184 64.7
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.1e-68 263.8 168 70.2
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 1.4e-68 263.5 163 66.9
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 5.4e-68 261.5 172 69.8
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.2e-67 260.4 168 70.2
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.0e-66 255.0 212 59.9
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 6.6e-66 254.6 197 61.4
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 6.6e-66 254.6 206 58.3
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 5.6e-65 251.5 183 62.8
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 9.5e-65 250.8 197 58.4
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 8.9e-63 244.2 161 68.9
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 6.4e-61 238.0 180 58.9
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 4.1e-60 235.3 133 76.7
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.3e-58 230.3 143 72.7
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 3.0e-58 229.2 184 61.4
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 6.8e-55 218.0 133 70.7
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 2.0e-54 216.5 161 64.6
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 4.4e-54 215.3 134 71.6
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 1.3e-53 213.8 185 52.4
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 1.1e-52 210.7 158 57.0
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.4e-52 210.3 159 56.0
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.9e-52 209.9 157 59.9
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 3.2e-52 209.1 162 57.4
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 1.6e-43 180.3 116 70.7
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 6.2e-40 168.3 103 70.9
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 1.2e-38 164.1 161 48.4
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 7.8e-35 151.4 144 51.4
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 6.2e-32 141.7 164 40.9
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.0e-31 139.0 158 48.1
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 4.0e-31 139.0 86 73.3
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 9.9e-30 134.4 161 43.5
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.9e-29 132.9 81 72.8
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 1.0e-18 97.8 52 76.9
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.1e-17 94.4 71 62.0
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 7.4e-17 91.7 60 65.0
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 7.4e-17 91.7 53 77.4
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.4e-15 87.4 52 71.2
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 6.9e-15 85.1 54 70.4
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 6.1e-11 72.0 164 32.3
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 5.1e-10 68.9 33 90.9
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 8.7e-10 68.2 91 42.9
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 8.7e-10 68.2 91 42.9
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 8.7e-10 68.2 91 42.9
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 2.5e-09 66.6 90 42.2
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 8.2e-08 61.6 39 64.1
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.2e-06 57.8 34 70.6


User provided reference genes

Program Settings