Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc123.1 Carica papaya HOM05D000002 ORTHO05D001134 6.2e-88 327.4 161 100.0
Cpa.g.sc495.1 Carica papaya HOM05D000002 ORTHO05D001134 1.5e-22 110.2 208 38.0
Cpa.g.sc52.145 Carica papaya HOM05D000002 ORTHO05D001134 4.5e-22 108.6 81 67.9
Sabra16G0095800 Salix brachista HOM05D000002 ORTHO05D001134 5.9e-22 108.2 219 33.8
Sabra11G0076200 Salix brachista HOM05D000002 ORTHO05D001134 8.5e-21 104.4 240 32.1
Sabra16G0135200 Salix brachista HOM05D000002 ORTHO05D001134 7.2e-20 101.3 245 29.8
Sabra05G0016200 Salix brachista HOM05D000002 ORTHO05D001134 2.8e-16 89.4 258 27.9
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.1e-15 85.9 110 45.5
EL10Ac6g13863 Beta vulgaris HOM05D000002 ORTHO05D001134 9.1e-15 84.3 113 42.5
Sabra11G0092000 Salix brachista HOM05D000002 ORTHO05D001134 3.4e-14 82.4 258 27.1
AL5G19750 Arabidopsis lyrata HOM05D000002 ORTHO05D000001 1.0e-13 80.9 213 30.5
Cpa.g.sc118.27 Carica papaya HOM05D000002 ORTHO05D017783 1.7e-13 80.1 54 72.2
Sabra11G0075700 Salix brachista HOM05D000002 ORTHO05D001134 1.7e-13 80.1 157 32.5
CANSAT01G0351 Cannabis sativa HOM05D000002 ORTHO05D001134 5.0e-13 78.6 113 41.6
Cpa.g.sc4.185 Carica papaya HOM05D000002 ORTHO05D001134 5.0e-13 78.6 54 70.4
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 6.5e-13 78.2 185 33.0
CANSAT56G3668 Cannabis sativa HOM05D000002 ORTHO05D001134 1.4e-12 77.0 110 42.7
CANSAT80G2528 Cannabis sativa HOM05D000002 ORTHO05D001134 3.2e-12 75.9 107 39.3
CSS0013561 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.2e-12 75.5 254 27.2
CSS0019952 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.2e-12 75.5 254 27.2
CSS0031421 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.2e-12 75.5 254 27.2
Ah.10g026270 Amaranthus hybridus HOM05D000002 ORTHO05D001134 9.4e-12 74.3 55 61.8
CSS0005787 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 9.4e-12 74.3 254 27.2
CSS0017973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 9.4e-12 74.3 254 27.2
CSS0032029 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 9.4e-12 74.3 254 27.2
CSS0045046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 9.4e-12 74.3 254 27.2
CSS0047428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 9.4e-12 74.3 254 27.2
CSS0040386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-11 73.9 254 26.8
CSS0043616 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-11 73.9 254 26.8
CSS0044748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-11 73.9 254 26.8
Cpa.g.sc33.42 Carica papaya HOM05D000002 ORTHO05D001134 1.6e-11 73.6 54 68.5
Ah.05g174010 Amaranthus hybridus HOM05D000002 ORTHO05D001134 2.1e-11 73.2 69 56.5
CSS0001359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.1e-11 73.2 254 26.8
CSS0015894 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.1e-11 73.2 254 26.8
CSS0021489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.1e-11 73.2 254 26.8
CANSAT64G1210 Cannabis sativa HOM05D000002 ORTHO05D001134 2.1e-11 73.2 76 51.3
TPR.G29589 Trifolium pratense HOM05D000002 ORTHO05D001134 2.1e-11 73.2 101 38.6
CANSAT54G2195 Cannabis sativa HOM05D000002 ORTHO05D001134 2.7e-11 72.8 76 51.3
CANSAT64G1389 Cannabis sativa HOM05D000002 ORTHO05D001134 2.7e-11 72.8 76 51.3
Ah.02g118660 Amaranthus hybridus HOM05D000002 ORTHO05D001134 3.6e-11 72.4 82 46.3
AUR62032617 Chenopodium quinoa HOM05D000202 ORTHO05D001134 3.6e-11 72.4 217 29.0
CANSAT11G0903 Cannabis sativa HOM05D000002 ORTHO05D001134 8.0e-11 71.2 53 60.4
Sabra19G0009600 Salix brachista HOM05D000002 ORTHO05D001134 8.0e-11 71.2 209 27.3
Ah.05g173920 Amaranthus hybridus HOM05D000002 ORTHO05D001134 1.0e-10 70.9 69 49.3
Cpa.g.sc76.1 Carica papaya HOM05D000002 ORTHO05D001134 1.0e-10 70.9 45 71.1
CANSAT01G0629 Cannabis sativa HOM05D000002 ORTHO05D001134 1.4e-10 70.5 230 27.0
CANSAT11G1596 Cannabis sativa HOM05D000002 ORTHO05D001134 1.4e-10 70.5 76 50.0
CANSAT35G0681 Cannabis sativa HOM05D000002 ORTHO05D001134 1.4e-10 70.5 76 50.0
CSS0048219 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.8e-10 70.1 234 27.4
Migut.M00507 Erythranthe guttata HOM05D000002 ORTHO05D001134 1.8e-10 70.1 98 43.9
Ah.10g027000 Amaranthus hybridus HOM05D000002 ORTHO05D001134 2.3e-10 69.7 172 32.6
CSS0004348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.3e-10 69.7 201 27.9
CANSAT54G2526 Cannabis sativa HOM05D000002 ORTHO05D001134 6.7e-10 68.2 75 49.3
Cpa.g.sc1651.1 Carica papaya HOM05D000002 ORTHO05D001134 6.7e-10 68.2 44 65.9
CANSAT78G1580 Cannabis sativa HOM05D000002 ORTHO05D001134 2.0e-09 66.6 75 48.0
Cpa.g.sc2244.1 Carica papaya HOM05D000002 ORTHO05D001134 3.3e-09 65.9 48 64.6
Cpa.g.sc11.83 Carica papaya HOM05D000002 ORTHO05D001134 7.4e-09 64.7 49 69.4
Cpa.g.sc20.178 Carica papaya HOM05D000002 ORTHO05D001134 9.7e-09 64.3 48 56.2
BcaB05g23570 Brassica carinata HOM05D000002 ORTHO05D001134 2.8e-08 62.8 59 55.9
CANSAT01G2951 Cannabis sativa HOM05D000002 ORTHO05D001134 1.8e-07 60.1 37 70.3
RcHm_v2.0_Chr4g0390941 Rosa chinensis HOM05D000002 ORTHO05D001134 4.1e-07 58.9 144 31.9
AUR62019719 Chenopodium quinoa HOM05D000002 ORTHO05D001134 5.3e-07 58.5 55 52.7
THA.LOC104818495 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 9.1e-07 57.8 65 46.2
CANSAT01G3173 Cannabis sativa HOM05D000002 ORTHO05D001134 3.5e-06 55.8 122 32.0
Cpa.g.sc79.36 Carica papaya HOM05D000002 ORTHO05D001134 4.5e-06 55.5 92 37.0
ECA248G2667 Erigeron canadensis HOM05D000002 ORTHO05D001134 4.5e-06 55.5 145 24.8
CANSAT35G1620 Cannabis sativa HOM05D000002 ORTHO05D001134 5.9e-06 55.1 69 46.4
CANSAT56G2162 Cannabis sativa HOM05D000002 ORTHO05D001134 7.7e-06 54.7 186 25.3
RcHm_v2.0_Chr7g0181641 Rosa chinensis HOM05D000002 ORTHO05D001134 7.7e-06 54.7 112 35.7


User provided reference genes

Program Settings