Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc122.34 Carica papaya HOM05D000004 ORTHO05D000002 5.6e-71 270.8 132 100.0
Cpa.g.sc14.28 Carica papaya HOM05D000004 ORTHO05D000002 1.6e-25 119.8 102 56.9
Manes.08G059801 Manihot esculenta HOM05D000004 ORTHO05D000002 5.1e-24 114.8 136 47.1
Manes.11G130716 Manihot esculenta HOM05D000004 ORTHO05D000002 5.1e-24 114.8 136 47.1
Thhalv10012141m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 5.7e-23 111.3 109 52.3
Oeu015199.1 Olea europaea HOM05D000004 ORTHO05D000002 2.2e-22 109.4 102 52.0
Cpa.g.sc309.3 Carica papaya HOM05D001083 ORTHO05D006562 1.1e-21 107.1 86 59.3
Manes.17G016004 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-21 107.1 115 46.1
Manes.17G007266 Manihot esculenta HOM05D000004 ORTHO05D000002 1.8e-21 106.3 128 46.1
Cpa.g.sc147.17 Carica papaya HOM05D000004 ORTHO05D000002 2.4e-21 105.9 100 53.0
Manes.17G118357 Manihot esculenta HOM05D000004 ORTHO05D000002 2.4e-21 105.9 115 46.1
Manes.03G138751 Manihot esculenta HOM05D000004 ORTHO05D000002 4.1e-21 105.1 102 53.9
Thhalv10017833m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 1.2e-20 103.6 86 57.0
Manes.12G088990 Manihot esculenta HOM05D000004 ORTHO05D000002 1.5e-20 103.2 91 54.9
Thhalv10027465m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 2.0e-20 102.8 89 57.3
SHI48351 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-20 102.8 91 56.0
BolC4t24363H Brassica oleracea HOM05D000050 ORTHO05D000771 2.6e-20 102.4 91 54.9
Manes.06G033812 Manihot esculenta HOM05D000004 ORTHO05D000002 2.6e-20 102.4 115 44.3
Cpa.g.sc88.33 Carica papaya HOM05D000004 ORTHO05D000002 5.9e-20 101.3 89 57.3
Cpa.g.sc112.15 Carica papaya HOM05D000004 ORTHO05D000002 7.7e-20 100.9 102 47.1
QL05p032758 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-19 100.5 112 50.0
Cpa.g.sc18.14 Carica papaya HOM05D000004 ORTHO05D000002 2.9e-19 99.0 90 54.4
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-19 98.6 91 53.8
Cpa.g.sc121.18 Carica papaya HOM05D000004 ORTHO05D000002 6.5e-19 97.8 98 52.0
SHI10884 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-18 97.1 87 56.3
Cpa.g.sc23.138 Carica papaya HOM05D000004 ORTHO05D000002 1.4e-18 96.7 93 50.5
Cpa.g.sc4.133 Carica papaya HOM05D000004 ORTHO05D000002 1.4e-18 96.7 81 58.0
SHI02827 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-16 89.7 68 58.8
BolC6t38605H Brassica oleracea HOM05D000004 ORTHO05D000002 2.3e-16 89.4 89 46.1
CiPaw.09G207300 Carya illinoinensis HOM05D000004 ORTHO05D000002 5.2e-16 88.2 118 39.0
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 5.2e-16 88.2 68 57.4
Cpa.g.sc25.66 Carica papaya HOM05D000004 ORTHO05D000002 6.7e-16 87.8 92 52.2
SHI48738 Sapria himalayana HOM05D000004 ORTHO05D000002 8.8e-16 87.4 68 60.3
TWI56G0901 Tripterygium wilfordii HOM05D000004 ORTHO05D000048 8.8e-16 87.4 94 46.8
Cpa.g.sc8.99 Carica papaya HOM05D000004 ORTHO05D000002 2.6e-15 85.9 83 49.4
SHI46302 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-14 83.6 73 56.2
Cpa.g.sc1.40 Carica papaya HOM05D000004 ORTHO05D000002 8.2e-14 80.9 73 56.2
BolC2t11371H Brassica oleracea HOM05D000004 ORTHO05D000002 5.3e-13 78.2 63 61.9
Cpa.g.sc15.136 Carica papaya HOM05D000004 ORTHO05D000002 9.1e-13 77.4 66 57.6
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 9.1e-13 77.4 89 41.6
Sp7g21440 Schrenkiella parvula HOM05D000004 ORTHO05D000002 9.1e-13 77.4 91 46.2
Cpa.g.sc4.25 Carica papaya HOM05D000004 ORTHO05D000002 1.0e-11 73.9 92 40.2
Thhalv10026804m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 3.8e-11 72.0 62 54.8
Hma1.2p1_1820F.1_g304130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.1e-10 70.5 123 30.1
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 2.5e-10 69.3 93 34.4
PSO675G0046 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-10 69.3 92 39.1
COL.COLO4_12903 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.5e-10 68.2 127 32.3
QL03p012718 Quercus lobata HOM05D000004 ORTHO05D050647 5.5e-10 68.2 112 33.9
Atru.chr7.1185 Acer truncatum HOM05D000004 ORTHO05D000002 7.2e-10 67.8 89 39.3
COL.COLO4_22673 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.2e-10 67.8 91 39.6
COL.COLO4_28806 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.4e-10 67.4 112 37.5
Sabra09G0078600 Salix brachista HOM05D000004 ORTHO05D000002 9.4e-10 67.4 112 32.1
Sabra10G0166600 Salix brachista HOM05D000004 ORTHO05D000002 9.4e-10 67.4 112 32.1
Cpa.g.sc13.195 Carica papaya HOM05D000004 ORTHO05D000002 1.2e-09 67.0 77 45.5
Cpa.g.sc1.399 Carica papaya HOM05D000004 ORTHO05D000002 2.7e-09 65.9 46 65.2
CiPaw.03G095100 Carya illinoinensis HOM05D000004 ORTHO05D000002 2.7e-09 65.9 88 33.0
COL.COLO4_28963 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.7e-09 65.9 123 34.1
Actinidia17954 Actinidia chinensis HOM05D000004 ORTHO05D000002 3.6e-09 65.5 122 31.1
COL.COLO4_24818 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.6e-09 65.5 100 34.0
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-09 65.5 88 39.8
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-09 65.1 106 34.0
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-09 65.1 92 38.0
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-09 65.1 88 35.2
ECA246G1944 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-09 65.1 88 35.2
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 4.7e-09 65.1 92 39.1
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 4.7e-09 65.1 92 39.1
TPR.G39702 Trifolium pratense HOM05D000004 ORTHO05D000002 4.7e-09 65.1 75 40.0
Actinidia00506 Actinidia chinensis HOM05D000004 ORTHO05D000002 6.1e-09 64.7 67 41.8
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.1e-09 64.7 88 33.0
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.0e-09 64.3 118 31.4
COL.COLO4_36747 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.0e-09 64.3 133 27.8
TWI77G0663 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.0e-08 63.9 114 33.3
vmacro19668 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 1.0e-08 63.9 89 32.6
Sabra07G0076600 Salix brachista HOM05D000004 ORTHO05D000002 1.8e-08 63.2 118 30.5
Sabra10G0044500 Salix brachista HOM05D000075 ORTHO05D000002 1.8e-08 63.2 118 32.2
Cpa.g.sc44.47 Carica papaya HOM05D008870 ORTHO05D000002 2.3e-08 62.8 59 49.2
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-08 62.8 84 35.7
Nn6g31876 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.3e-08 62.8 87 39.1
Oeu023054.1 Olea europaea HOM05D000004 ORTHO05D000002 2.3e-08 62.8 66 51.5
PSO384G1149 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-08 62.8 86 38.4
Psat5g079920 Pisum sativum HOM05D000004 ORTHO05D000002 2.3e-08 62.8 93 37.6
Atru.chr2.1912 Acer truncatum HOM05D000004 ORTHO05D000002 3.0e-08 62.4 88 37.5
Cpa.g.sc1999.1 Carica papaya HOM05D000004 ORTHO05D000002 3.0e-08 62.4 51 58.8
Cpa.g.sc47.42 Carica papaya HOM05D000004 ORTHO05D000002 3.0e-08 62.4 51 58.8
COL.COLO4_36883 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.0e-08 62.4 121 34.7
Sabra06G0095200 Salix brachista HOM05D002585 ORTHO05D002917 3.0e-08 62.4 122 32.8
COL.COLO4_20202 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.0e-08 62.0 123 34.1
SHI02379 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-08 62.0 92 34.8
COL.COLO4_20628 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.2e-08 61.6 89 33.7
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.2e-08 61.6 84 35.7
Nn8g40371 Nelumbo nucifera HOM05D000004 ORTHO05D011610 8.8e-08 60.8 96 35.4
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 8.8e-08 60.8 93 34.4
TWI09G0741 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.8e-08 60.8 88 36.4
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 60.5 83 32.5
ECA240G2607 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 60.5 88 33.0
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-07 60.1 99 33.3
Sabra15G0047100 Salix brachista HOM05D000113 ORTHO05D001108 1.5e-07 60.1 91 31.9
SHI25617 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-07 60.1 89 34.8
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.5e-07 60.1 94 30.9
Atru.chr4.870 Acer truncatum HOM05D000004 ORTHO05D000002 2.0e-07 59.7 121 29.8
COL.COLO4_09232 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.0e-07 59.7 106 34.0
MD14G1073100 Malus domestica HOM05D001739 ORTHO05D000002 2.0e-07 59.7 87 35.6
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-07 59.7 96 32.3
Sabra19G0002000 Salix brachista HOM05D000004 ORTHO05D000002 2.0e-07 59.7 92 35.9
COL.COLO4_19395 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.6e-07 59.3 105 32.4
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-07 59.3 85 36.5
ECA247G3996 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-07 59.3 88 34.1
COL.COLO4_30049 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.3e-07 58.9 126 30.2
ECA240G2001 Erigeron canadensis HOM05D000059 ORTHO05D004122 3.3e-07 58.9 100 36.0
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 4.4e-07 58.5 92 31.5
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 4.4e-07 58.5 92 31.5
ECA233G3795 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.4e-07 58.5 90 35.6
SHI15690 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-07 58.5 91 33.0
TWI36G1188 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.4e-07 58.5 86 32.6
Atru.chr1.2388 Acer truncatum HOM05D000004 ORTHO05D000002 5.7e-07 58.2 118 29.7
COL.COLO4_27446 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.7e-07 58.2 91 34.1
COL.COLO4_36542 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.7e-07 58.2 64 43.8
Lj4C52G8 Lonicera japonica HOM05D013013 ORTHO05D000002 5.7e-07 58.2 98 33.7
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.5e-07 57.8 86 32.6
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 7.5e-07 57.8 89 30.3
SHI13122 Sapria himalayana HOM05D000004 ORTHO05D000002 7.5e-07 57.8 92 35.9
Ca_12976_v3 Cicer arietinum L. HOM05D003122 ORTHO05D012218 9.7e-07 57.4 106 31.1
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 9.7e-07 57.4 88 33.0
ECA246G2677 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.7e-07 57.4 87 33.3
COL.COLO4_35885 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.3e-06 57.0 82 34.1
ECA233G2726 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 57.0 123 34.1
Lj2C32T8 Lonicera japonica HOM05D000004 ORTHO05D000002 1.3e-06 57.0 98 32.7
Oeu037036.1 Olea europaea HOM05D000004 ORTHO05D000002 1.3e-06 57.0 92 32.6
COL.COLO4_04208 Corchorus olitorius HOM05D037185 ORTHO05D000002 1.7e-06 56.6 82 35.4
Lj5P794T25 Lonicera japonica HOM05D000004 ORTHO05D000002 1.7e-06 56.6 93 34.4
Sopen03g037800 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-06 56.6 114 28.9
COL.COLO4_36693 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.2e-06 56.2 84 35.7
PSO675G9204 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-06 56.2 132 29.5
Psat5g251080 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-06 56.2 88 34.1
QL10p062399 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-06 56.2 87 32.2
CSS0032753 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-06 55.8 79 36.7
AUR62006479 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.8e-06 55.8 93 31.2
ECA236G4933 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-06 55.8 133 29.3
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-06 55.8 113 32.7
Lj3P133T15 Lonicera japonica HOM05D000004 ORTHO05D000002 2.8e-06 55.8 93 35.5
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 2.8e-06 55.8 98 35.7
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-06 55.5 135 25.9
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-06 55.5 100 34.0
Lj5C185T14 Lonicera japonica HOM05D000004 ORTHO05D000002 3.7e-06 55.5 103 29.1
Lj5C834G3 Lonicera japonica HOM05D000004 ORTHO05D000002 3.7e-06 55.5 93 30.1
SHI20498 Sapria himalayana HOM05D000002 ORTHO05D000002 3.7e-06 55.5 89 31.5
Sopen01g025330 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.5 94 30.9
Sopen08g020120 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.5 94 30.9
VMungo0251G3700 Vigna mungo HOM05D003122 ORTHO05D000002 3.7e-06 55.5 89 31.5
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 3.7e-06 55.5 98 34.7
COL.COLO4_19779 Corchorus olitorius HOM05D052653 ORTHO05D000002 4.8e-06 55.1 83 36.1
FvH4_5g27691 Fragaria vesca HOM05D018140 ORTHO05D000002 4.8e-06 55.1 88 38.6
TPR.G37411 Trifolium pratense HOM05D000004 ORTHO05D000002 4.8e-06 55.1 87 28.7
TPR.G6317 Trifolium pratense HOM05D000004 ORTHO05D000002 4.8e-06 55.1 113 25.7
Lj2P695T11 Lonicera japonica HOM05D000004 ORTHO05D000002 6.3e-06 54.7 98 31.6
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 6.3e-06 54.7 92 34.8
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 6.3e-06 54.7 92 34.8
COL.COLO4_03641 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.2e-06 54.3 108 34.3
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.2e-06 54.3 98 30.6
Nn5g31040 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.2e-06 54.3 90 30.0
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 8.2e-06 54.3 88 30.7
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 8.2e-06 54.3 88 30.7
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 8.2e-06 54.3 88 30.7
SHI16727 Sapria himalayana HOM05D000004 ORTHO05D000002 8.2e-06 54.3 77 35.1


User provided reference genes

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