Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc120.22 Carica papaya HOM05D004264 ORTHO05D004680 1.1e-54 216.5 114 100.0
GSVIVG01030301001 Vitis vinifera HOM05D004264 ORTHO05D004680 2.3e-28 129.0 114 59.6
Cpa.g.sc82.40 Carica papaya HOM05D004264 ORTHO05D004680 3.9e-28 128.3 94 75.5
Ciclev10013172m.g Citrus clementina HOM05D004264 ORTHO05D004680 6.6e-28 127.5 114 62.3
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 8.6e-28 127.1 113 59.3
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 3.3e-27 125.2 113 63.7
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 4.3e-27 124.8 113 58.4
Haze_21059 Corylus avellana HOM05D004264 ORTHO05D004680 4.3e-27 124.8 114 58.8
QL07p034201 Quercus lobata HOM05D004264 ORTHO05D004680 1.6e-26 122.9 113 55.8
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 2.8e-26 122.1 113 58.4
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 1.1e-25 120.2 113 57.5
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 2.4e-25 119.0 113 56.6
TAR209G0008 Trochodendron aralioides HOM05D004264 ORTHO05D004680 6.9e-25 117.5 114 54.4
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 1.5e-24 116.3 113 56.6
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 2.6e-24 115.5 113 56.6
Gohir.D10G240300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.6e-24 115.5 114 57.0
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 3.4e-24 115.2 113 53.1
Gohir.D11G227700 Gossypium hirsutum HOM05D004264 ORTHO05D004680 4.4e-24 114.8 114 56.1
Eucgr.G00894 Eucalyptus grandis HOM05D004264 ORTHO05D004680 1.3e-23 113.2 114 52.6
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.7e-23 112.8 113 55.8
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 2.9e-23 112.1 113 53.1
Gorai.011G276000 Gossypium raimondii HOM05D004264 ORTHO05D004680 4.9e-23 111.3 114 55.3
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 1.1e-22 110.2 113 54.0
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 1.2e-21 106.7 110 50.9
Prupe.6G283000 Prunus persica HOM05D004264 ORTHO05D004680 1.6e-21 106.3 114 50.0
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 2.1e-21 105.9 113 48.7
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 2.1e-21 105.9 110 52.7
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 2.1e-21 105.9 113 53.1
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 2.7e-21 105.5 113 47.8
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 4.6e-21 104.8 113 49.6
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 6.0e-21 104.4 101 55.4
vmacro20314 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 1.3e-20 103.2 114 50.9
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 1.7e-20 102.8 113 46.0
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.3e-20 102.4 113 51.3
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 2.3e-20 102.4 109 50.5
DCAR_018676 Daucus carota HOM05D004264 ORTHO05D004680 3.9e-20 101.7 114 50.0
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 5.1e-20 101.3 113 50.4
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 5.1e-20 101.3 113 49.6
FAN14G2539 Fragaria x ananassa HOM05D004264 ORTHO05D004680 8.7e-20 100.5 114 49.1
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 1.1e-19 100.1 111 48.6
FvH4_6g10920 Fragaria vesca HOM05D004264 ORTHO05D004680 1.9e-19 99.4 114 49.1
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 1.9e-19 99.4 113 49.6
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 2.5e-19 99.0 113 48.7
Sopen04g028370 Solanum pennellii HOM05D004264 ORTHO05D004680 2.5e-19 99.0 110 48.2
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 3.3e-19 98.6 109 48.6
Sc09g0006620 Simmondsia chinensis HOM05D004264 ORTHO05D004680 3.3e-19 98.6 113 46.9
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 3.3e-19 98.6 109 47.7
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 7.3e-19 97.4 113 47.8
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 7.3e-19 97.4 113 47.8
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 7.3e-19 97.4 113 47.8
Rhsim05G0223600 Rhododendron simsii HOM05D004264 ORTHO05D004680 7.3e-19 97.4 114 47.4
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 9.6e-19 97.1 113 49.6
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 1.3e-18 96.7 90 54.4
vmacro05245 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 1.3e-18 96.7 114 47.4
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.6e-18 96.3 113 47.8
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 2.1e-18 95.9 109 49.5
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 2.1e-18 95.9 113 46.9
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 2.1e-18 95.9 113 46.0
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 2.8e-18 95.5 113 47.8
vmacro05226 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 4.8e-18 94.7 114 46.5
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 1.1e-17 93.6 113 48.7
MELO3C026013.2 Cucumis melo HOM05D004264 ORTHO05D004680 1.1e-17 93.6 114 44.7
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.4e-17 93.2 113 46.0
HanXRQChr13g0390241 Helianthus annuus HOM05D004264 ORTHO05D004680 1.8e-17 92.8 106 48.1
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 3.1e-17 92.0 111 44.1
RcHm_v2.0_Chr3g0462181 Rosa chinensis HOM05D004264 ORTHO05D004680 5.3e-17 91.3 114 44.7
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 2.0e-16 89.4 103 47.6
Gohir.D01G029100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.6e-16 89.0 105 48.6
HanXRQChr02g0036811 Helianthus annuus HOM05D004264 ORTHO05D004680 2.6e-16 89.0 114 44.7
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 3.4e-16 88.6 111 43.2
MSTRG.5553 Avicennia marina HOM05D004264 ORTHO05D004680 4.5e-16 88.2 110 48.2
Gohir.D12G051300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 5.8e-16 87.8 105 48.6
Gohir.D04G142200 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.3e-15 86.7 105 47.6
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 1.3e-15 86.7 110 46.4
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 1.7e-15 86.3 113 43.4
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 2.2e-15 85.9 120 42.5
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 2.9e-15 85.5 113 42.5
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 3.8e-15 85.1 108 44.4
Gorai.004G095600 Gossypium raimondii HOM05D004264 ORTHO05D004680 3.2e-14 82.0 122 45.1
Migut.J00117 Erythranthe guttata HOM05D004264 ORTHO05D004680 7.1e-14 80.9 114 46.5
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 9.3e-14 80.5 113 41.6
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 1.6e-13 79.7 105 44.8
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.7e-13 79.0 113 42.5
Aqoxy3G03065 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 3.5e-13 78.6 106 44.3
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 3.5e-13 78.6 113 42.5
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 7.9e-13 77.4 99 41.4
Aa31LG1G23180 Aethionema arabicum HOM05D004264 ORTHO05D004680 1.0e-12 77.0 107 43.0
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 3.0e-12 75.5 113 39.8
BolC1t05486H Brassica oleracea HOM05D004264 ORTHO05D004680 5.1e-12 74.7 115 40.9
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 5.1e-12 74.7 105 43.8
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 8.7e-12 73.9 99 43.4
Gorai.011G076200 Gossypium raimondii HOM05D004264 ORTHO05D004680 8.7e-12 73.9 79 51.9
BraA03t12802Z Brassica rapa HOM05D004264 ORTHO05D004680 1.1e-11 73.6 107 43.0
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 1.1e-11 73.6 110 40.0
Gorai.004G074900 Gossypium raimondii HOM05D004264 ORTHO05D004680 1.1e-11 73.6 97 45.4
Migut.D01629 Erythranthe guttata HOM05D004264 ORTHO05D004680 5.6e-11 71.2 114 40.4
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 9.6e-11 70.5 59 57.6
BcaNung00021 Brassica carinata HOM05D004264 ORTHO05D004680 1.6e-10 69.7 108 38.0
A03p36330 Brassica napus HOM05D004264 ORTHO05D004680 4.8e-10 68.2 107 40.2
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.4e-09 65.9 105 39.0
HPP92_011366 Vanilla planifolia HOM05D004264 ORTHO05D004680 2.4e-09 65.9 114 38.6
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 9.0e-09 63.9 100 35.0
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 9.0e-09 63.9 58 55.2
Zm00001eb423320 Zea mays HOM05D004264 ORTHO05D004680 5.8e-08 61.2 104 35.6
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 9.9e-08 60.5 113 35.4
BcaC04g20357 Brassica carinata HOM05D004264 ORTHO05D004680 1.3e-07 60.1 108 38.0
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 1.7e-07 59.7 101 36.6
A03p61420 Brassica napus HOM05D004264 ORTHO05D004680 1.7e-07 59.7 108 37.0
C03p54850 Brassica napus HOM05D004264 ORTHO05D004680 2.9e-07 58.9 108 36.1
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 2.9e-07 58.9 81 40.7
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 3.8e-07 58.5 68 44.1
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 4.9e-07 58.2 101 35.6
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 4.9e-07 58.2 101 35.6
BcaB05g23097 Brassica carinata HOM05D004264 ORTHO05D004680 1.4e-06 56.6 115 33.9
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 1.9e-06 56.2 109 33.9
Zm00001eb068100 Zea mays HOM05D004264 ORTHO05D004680 4.2e-06 55.1 105 29.5


User provided reference genes

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