Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc12.82 Carica papaya HOM05D004535 ORTHO05D005341 1.4e-51 206.1 106 100.0
A03p38140 Brassica napus HOM05D004535 ORTHO05D005341 9.8e-42 173.3 100 87.0
C03p46300 Brassica napus HOM05D004535 ORTHO05D005341 9.8e-42 173.3 100 87.0
BolC3t16899H Brassica oleracea HOM05D004535 ORTHO05D005341 9.8e-42 173.3 100 87.0
BraA03t12967Z Brassica rapa HOM05D004535 ORTHO05D005341 9.8e-42 173.3 100 87.0
CDE05G3236 Ceratophyllum demersum HOM05D004535 ORTHO05D005341 1.3e-41 172.9 101 83.2
Eucgr.F02001 Eucalyptus grandis HOM05D004535 ORTHO05D005341 1.3e-41 172.9 94 91.5
BcaB04g18753 Brassica carinata HOM05D004535 ORTHO05D005341 1.7e-41 172.6 100 86.0
Thhalv10019881m.g Eutrema salsugineum HOM05D004535 ORTHO05D005341 1.7e-41 172.6 100 86.0
BcaC01g03999 Brassica carinata HOM05D004535 ORTHO05D005341 2.8e-41 171.8 100 87.0
Thecc.07G003100 Theobroma cacao HOM05D004535 ORTHO05D005341 2.8e-41 171.8 100 87.0
Manes.01G005500 Manihot esculenta HOM05D004535 ORTHO05D005341 3.7e-41 171.4 100 86.0
Duzib213G0320 Durio zibethinus HOM05D004535 ORTHO05D005341 8.3e-41 170.2 94 90.4
Potri.011G167650 Populus trichocarpa HOM05D004535 ORTHO05D005341 8.3e-41 170.2 106 82.1
Atru.chr2.3782 Acer truncatum HOM05D004535 ORTHO05D005341 1.4e-40 169.5 95 90.5
AT3G13330 Arabidopsis thaliana HOM05D004535 ORTHO05D005341 1.4e-40 169.5 100 83.0
Carub.0003s1271 Capsella rubella HOM05D004535 ORTHO05D005341 1.4e-40 169.5 100 85.0
FAN21G2952 Fragaria x ananassa HOM05D004535 ORTHO05D005341 1.8e-40 169.1 100 84.0
FAN25G2892 Fragaria x ananassa HOM05D004535 ORTHO05D005341 1.8e-40 169.1 100 84.0
MD11G1042000 Malus domestica HOM05D004535 ORTHO05D005341 1.8e-40 169.1 100 84.0
Prupe.6G032900 Prunus persica HOM05D004535 ORTHO05D005341 1.8e-40 169.1 100 84.0
AL3G25150 Arabidopsis lyrata HOM05D004535 ORTHO05D005341 3.1e-40 168.3 100 82.0
CARHR087940 Cardamine hirsuta HOM05D004535 ORTHO05D005341 3.1e-40 168.3 100 83.0
MD03G1040600 Malus domestica HOM05D004535 ORTHO05D005341 3.1e-40 168.3 100 84.0
Medtr3g461520 Medicago truncatula HOM05D004535 ORTHO05D005341 3.1e-40 168.3 100 84.0
THA.LOC104822705 Tarenaya hassleriana HOM05D004535 ORTHO05D005341 3.1e-40 168.3 100 84.0
TWI38G2299 Tripterygium wilfordii HOM05D004535 ORTHO05D005341 3.1e-40 168.3 100 81.0
RcHm_v2.0_Chr5g0075021 Rosa chinensis HOM05D004535 ORTHO05D005341 4.1e-40 167.9 100 83.0
TPR.G14720 Trifolium pratense HOM05D004535 ORTHO05D005341 4.1e-40 167.9 96 86.5
Aa31LG8G550 Aethionema arabicum HOM05D004535 ORTHO05D005341 5.4e-40 167.5 100 83.0
Dinv19653 Davidia involucrata HOM05D004535 ORTHO05D005341 5.4e-40 167.5 94 87.2
Glyma.18G071500 Glycine max HOM05D004535 ORTHO05D005341 5.4e-40 167.5 100 83.0
Gohir.A04G001901 Gossypium hirsutum HOM05D004535 ORTHO05D005341 5.4e-40 167.5 94 89.4
PGR083G0052 Punica granatum HOM05D004535 ORTHO05D005341 5.4e-40 167.5 93 88.2
Sp3g11530 Schrenkiella parvula HOM05D004535 ORTHO05D005341 5.4e-40 167.5 100 85.0
Actinidia03667 Actinidia chinensis HOM05D004535 ORTHO05D005341 9.2e-40 166.8 100 84.0
ECA240G2049 Erigeron canadensis HOM05D004535 ORTHO05D005341 9.2e-40 166.8 100 83.0
FAN11G1653 Fragaria x ananassa HOM05D004535 ORTHO05D005341 9.2e-40 166.8 100 83.0
FAN16G2454 Fragaria x ananassa HOM05D004535 ORTHO05D005341 9.2e-40 166.8 100 83.0
Glyma.08G336400 Glycine max HOM05D004535 ORTHO05D005341 9.2e-40 166.8 100 83.0
Actinidia00829 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.2e-39 166.4 92 90.2
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea HOM05D004535 ORTHO05D005341 1.2e-39 166.4 100 82.0
DCAR_013765 Daucus carota HOM05D004535 ORTHO05D005341 1.6e-39 166.0 100 83.0
Psat5g164120 Pisum sativum HOM05D004535 ORTHO05D005341 1.6e-39 166.0 100 82.0
Potri.001G470600 Populus trichocarpa HOM05D004535 ORTHO05D005341 1.6e-39 166.0 91 90.1
vmacro09603 Vaccinium macrocarpon HOM05D004535 ORTHO05D005341 1.6e-39 166.0 94 88.3
Ciclev10007234m.g Citrus clementina HOM05D004535 ORTHO05D005341 2.0e-39 165.6 98 86.7
HanXRQChr03g0079281 Helianthus annuus HOM05D004535 ORTHO05D005341 2.0e-39 165.6 100 84.0
Nn1g08312 Nelumbo nucifera HOM05D004535 ORTHO05D005341 2.7e-39 165.2 100 82.0
TAR627G0331 Trochodendron aralioides HOM05D004535 ORTHO05D005341 2.7e-39 165.2 100 83.0
HanXRQChr13g0409231 Helianthus annuus HOM05D004535 ORTHO05D005341 3.5e-39 164.9 101 85.1
Lj6g0015552 Lotus japonicus HOM05D004535 ORTHO05D005341 4.5e-39 164.5 95 86.3
Lalb_Chr20g0115261 Lupinus albus HOM05D004535 ORTHO05D005341 4.5e-39 164.5 95 85.3
Rhsim04G0008600 Rhododendron simsii HOM05D004535 ORTHO05D005341 4.5e-39 164.5 100 83.0
VMungo0540G2510 Vigna mungo HOM05D004535 ORTHO05D005341 4.5e-39 164.5 100 81.0
MBI15_g37116_MAGBIO Magnolia biondii HOM05D004535 ORTHO05D005341 5.9e-39 164.1 95 85.3
GSVIVG01014769001 Vitis vinifera HOM05D004535 ORTHO05D005341 5.9e-39 164.1 100 82.0
Aqoxy4G02281 Aquilegia oxysepala HOM05D004535 ORTHO05D005341 7.8e-39 163.7 100 81.0
AUR62035634 Chenopodium quinoa HOM05D004535 ORTHO05D005341 7.8e-39 163.7 98 83.7
Haze_09903 Corylus avellana HOM05D004535 ORTHO05D005341 7.8e-39 163.7 98 81.6
Phvul.006G061700 Phaseolus vulgaris HOM05D004535 ORTHO05D005341 7.8e-39 163.7 94 84.0
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 7.8e-39 163.7 99 80.8
HPP92_018915 Vanilla planifolia HOM05D004535 ORTHO05D005341 7.8e-39 163.7 100 82.0
Haze_09904 Corylus avellana HOM05D004535 ORTHO05D005341 1.7e-38 162.5 96 83.3
Lalb_Chr18g0050431 Lupinus albus HOM05D004535 ORTHO05D005341 2.3e-38 162.2 100 81.0
CiPaw.11G209600 Carya illinoinensis HOM05D004535 ORTHO05D005341 3.8e-38 161.4 98 81.6
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla HOM05D004535 ORTHO05D005341 5.0e-38 161.0 100 81.0
Sc20g0000040 Simmondsia chinensis HOM05D004535 ORTHO05D005341 5.0e-38 161.0 92 87.0
CSS0018371 Camellia sinensis var. sinensis HOM05D004535 ORTHO05D005341 8.6e-38 160.2 100 80.0
CANSAT11G1644 Cannabis sativa HOM05D004535 ORTHO05D005341 8.6e-38 160.2 90 87.8
Medtr3g461500 Medicago truncatula HOM05D004535 ORTHO05D005341 8.6e-38 160.2 100 79.0
PSO210G5731 Papaver somniferum HOM05D004535 ORTHO05D005341 1.1e-37 159.8 98 81.6
Sed0018073 Sechium edule HOM05D004535 ORTHO05D005341 1.5e-37 159.5 102 79.4
Lj1C898T24 Lonicera japonica HOM05D004535 ORTHO05D005341 1.9e-37 159.1 119 72.3
AUR62017172 Chenopodium quinoa HOM05D004535 ORTHO05D005341 2.5e-37 158.7 98 81.6
MELO3C014086.2 Cucumis melo HOM05D004535 ORTHO05D005341 2.5e-37 158.7 100 80.0
Hund22978 Selenicereus undatus HOM05D004535 ORTHO05D005341 2.5e-37 158.7 90 87.8
CAN.G623.63 Capsicum annuum HOM05D004535 ORTHO05D005341 5.6e-37 157.5 114 72.8
Cc05_g15580 Coffea canephora HOM05D004535 ORTHO05D005341 7.3e-37 157.1 100 78.0
Oeu013013.2 Olea europaea HOM05D004535 ORTHO05D005341 9.5e-37 156.8 90 85.6
QL08p000755 Quercus lobata HOM05D004535 ORTHO05D005341 1.6e-36 156.0 99 78.8
ClCG10G004180 Citrullus lanatus HOM05D004535 ORTHO05D005341 2.1e-36 155.6 94 81.9
Sopen07g034220 Solanum pennellii HOM05D004535 ORTHO05D005341 2.8e-36 155.2 114 71.9
Migut.M01591 Erythranthe guttata HOM05D004535 ORTHO05D005341 3.6e-36 154.8 93 81.7
EL10Ac4g07499 Beta vulgaris HOM05D004535 ORTHO05D005341 6.1e-36 154.1 94 80.9
ATR0751G071 Amborella trichopoda HOM05D004535 ORTHO05D005341 8.0e-36 153.7 100 78.0
CsaV3_3G003990 Cucumis sativus L. HOM05D004535 ORTHO05D005341 1.0e-35 153.3 100 77.0
SalBow8G3417 Salvia bowleyana HOM05D004535 ORTHO05D005341 1.0e-35 153.3 100 76.0
Sabra11G0138700 Salix brachista HOM05D004535 ORTHO05D005341 2.3e-35 152.1 141 61.7
Solyc07g066030.4 Solanum lycopersicum HOM05D004535 ORTHO05D005341 2.3e-35 152.1 114 71.1
SalBow8G2487 Salvia bowleyana HOM05D004535 ORTHO05D005341 3.0e-35 151.8 93 79.6
Gohir.D05G387450 Gossypium hirsutum HOM05D004535 ORTHO05D005341 5.2e-35 151.0 81 90.1
Gorai.009G454100 Gossypium raimondii HOM05D004535 ORTHO05D005341 5.2e-35 151.0 81 90.1
Ah.06g180940 Amaranthus hybridus HOM05D004535 ORTHO05D005341 1.2e-34 149.8 117 69.2
unitig_699.g19598 Utricularia gibba HOM05D004535 ORTHO05D005341 4.4e-34 147.9 101 72.3
MSTRG.15824 Avicennia marina HOM05D004535 ORTHO05D005341 9.8e-34 146.7 93 76.3
Lsat_1_v5_gn_9_89621 Lactuca sativa HOM05D004535 ORTHO05D005341 6.4e-33 144.1 88 80.7
Ca_14860_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 2.7e-31 138.7 87 78.2
SEGI_15666 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 3.5e-31 138.3 92 76.1
Mapoly0071s0029 Marchantia polymorpha HOM05D004535 ORTHO05D005341 1.2e-28 129.8 90 68.9
SMO184G0002 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 5.2e-27 124.4 102 62.7
Zm00001eb281130 Zea mays HOM05D004535 ORTHO05D005341 5.2e-27 124.4 84 69.0
Mapoly0069s0005 Marchantia polymorpha HOM05D004535 ORTHO05D005341 6.8e-27 124.0 98 58.2
Pp3c20_11540 Physcomitrium patens HOM05D004535 ORTHO05D005341 7.5e-26 120.6 93 60.2
Nitab4.5_0000152g0130 Nicotiana tabacum HOM05D004535 ORTHO05D005341 2.2e-25 119.0 65 87.7
Peaxi162Scf00232g00530 Petunia axillaris HOM05D004535 ORTHO05D005341 2.9e-25 118.6 65 89.2
AagrBONN_evm.TU.Sc2ySwM_228.5886 Anthoceros agrestis HOM05D004535 ORTHO05D005341 2.7e-23 112.1 100 56.0
SMO340G0109 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 1.5e-21 106.3 101 55.4
Pp3c15_5520 Physcomitrium patens HOM05D004535 ORTHO05D005341 1.2e-20 103.2 87 56.3
SMO239G0001 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 1.2e-20 103.2 105 50.5
CBR_g24134 Chara braunii HOM05D004535 ORTHO05D005341 5.2e-19 97.8 90 54.4
Nitab4.5_0001303g0050 Nicotiana tabacum HOM05D004535 ORTHO05D005341 1.5e-18 96.3 51 84.3
MCO11G531 Micromonas commoda HOM05D004535 ORTHO05D005341 1.7e-14 82.8 77 49.4
PRCOL_00006556 Prasinoderma coloniale HOM05D004535 ORTHO05D005341 1.3e-09 66.6 89 40.4
Cfa027001 Carpinus fangiana HOM05D004535 ORTHO05D005341 7.8e-07 57.4 88 43.2
MD00G1206400 Malus domestica HOM05D004535 ORTHO05D005341 8.6e-06 53.9 37 70.3


User provided reference genes

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