Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 0.0e+00 1564.3 793 100.0
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 3.4e-179 632.9 825 50.1
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 2.6e-171 606.7 817 48.5
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 3.2e-169 599.7 825 47.9
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 1.2e-165 587.8 836 46.7
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 6.8e-164 582.0 827 46.8
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 2.9e-162 576.6 824 45.4
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 6.6e-159 565.5 826 46.5
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 8.6e-159 565.1 800 45.9
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 6.8e-156 555.4 832 45.9
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 6.4e-154 548.9 811 45.9
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 4.6e-152 542.7 824 44.4
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 6.0e-152 542.3 827 44.6
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 2.5e-150 537.0 799 44.7
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 3.3e-150 536.6 817 45.4
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 2.8e-149 533.5 813 45.0
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 7.6e-147 525.4 810 45.1
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 7.6e-147 525.4 820 43.4
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 1.9e-145 520.8 814 44.6
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 2.1e-144 517.3 788 44.8
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 3.5e-144 516.5 818 43.9
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 1.6e-141 507.7 822 42.9
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 4.8e-141 506.1 836 42.7
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 8.1e-141 505.4 823 43.4
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 6.9e-140 502.3 827 42.8
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 1.7e-138 497.7 834 43.8
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 2.4e-137 493.8 900 40.0
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 7.1e-137 492.3 837 43.7
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 7.9e-136 488.8 828 43.1
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.0e-135 488.4 804 44.3
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 6.2e-133 479.2 831 41.4
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 3.2e-129 466.8 823 41.3
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 5.5e-129 466.1 928 37.9
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 7.1e-129 465.7 805 41.4
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 4.3e-126 456.4 835 42.3
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 6.2e-125 452.6 806 41.4
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 6.2e-125 452.6 821 40.1
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 5.8e-123 446.0 804 40.8
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 2.3e-119 434.1 804 40.2
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 5.1e-119 433.0 812 39.5
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 5.1e-119 433.0 804 40.4
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 1.5e-118 431.4 804 40.3
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 6.3e-117 426.0 830 38.4
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 2.4e-116 424.1 831 40.8
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 1.5e-115 421.4 817 39.3
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 5.0e-114 416.4 834 40.3
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 9.4e-113 412.1 852 38.1
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.7e-112 410.6 831 40.2
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 7.9e-112 409.1 834 38.1
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.4e-111 408.3 828 39.7
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 7.4e-110 402.5 843 38.3
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 2.4e-108 397.5 836 38.5
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 1.2e-107 395.2 821 37.1
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 3.4e-107 393.7 827 36.9
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 4.5e-107 393.3 825 38.5
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 3.8e-106 390.2 800 38.4
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 2.7e-104 384.0 848 37.6
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 2.7e-104 384.0 854 37.2
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 2.7e-104 384.0 832 38.9
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 4.7e-104 383.3 777 38.1
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 8.8e-103 379.0 816 39.5
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 1.5e-102 378.3 778 37.7
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 2.8e-101 374.0 824 37.4
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 8.2e-101 372.5 822 36.6
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 2.9e-98 364.0 728 38.5
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 2.7e-96 357.5 822 36.5
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 2.7e-96 357.5 822 36.5
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.2e-91 342.0 794 35.8
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 1.3e-90 338.6 813 35.9
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 6.5e-90 336.3 850 34.4
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 6.5e-90 336.3 850 34.4
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 1.1e-89 335.5 833 35.1
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 6.1e-88 329.7 846 34.3
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 6.1e-88 329.7 846 34.3
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 3.0e-87 327.4 805 35.5
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 1.3e-85 322.0 834 35.9
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 6.3e-85 319.7 827 34.8
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 1.1e-84 318.9 855 33.7
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 2.0e-83 314.7 824 35.2
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 5.0e-82 310.1 807 34.9
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 6.5e-82 309.7 827 33.1
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 6.5e-82 309.7 794 34.6
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 6.5e-82 309.7 821 34.8
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 4.2e-81 307.0 838 34.4
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 7.2e-81 306.2 838 34.2
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 1.2e-80 305.4 825 33.8
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 1.6e-80 305.1 833 35.2
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.6e-80 305.1 803 34.4
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.0e-79 302.4 810 33.5
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 1.4e-79 302.0 823 34.1
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 4.0e-79 300.4 835 34.9
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 6.3e-77 293.1 808 34.5
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 4.1e-76 290.4 829 34.0
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 4.1e-76 290.4 802 33.3
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 7.0e-76 289.7 802 33.5
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 2.9e-74 284.3 858 33.4
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 5.0e-74 283.5 809 33.6
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 1.9e-73 281.6 827 34.9
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 7.3e-73 279.6 826 33.5
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 3.6e-72 277.3 788 34.0
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 6.4e-69 266.5 849 32.7
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 8.3e-69 266.2 844 32.3
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 1.2e-67 262.3 808 32.8
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 1.6e-67 261.9 813 32.8
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 1.6e-67 261.9 773 30.9
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 2.7e-67 261.2 291 53.3
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 1.6e-64 251.9 797 31.0
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 4.7e-64 250.4 767 33.2
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 1.4e-63 248.8 792 32.7
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 1.5e-62 245.4 800 32.1
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.0e-62 245.0 834 30.3
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 9.2e-60 236.1 807 33.1
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 8.1e-56 223.0 821 29.4
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 2.7e-51 208.0 761 29.6
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 4.3e-49 200.7 758 30.3
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 8.1e-48 196.4 767 30.2
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 6.8e-47 193.4 757 30.1
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 6.8e-47 193.4 723 29.7
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 2.6e-46 191.4 808 27.5
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 7.6e-46 189.9 778 30.8
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 1.3e-45 189.1 756 29.1
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 6.4e-45 186.8 611 31.4
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 2.4e-39 168.3 193 53.4
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 1.3e-37 162.5 753 28.2
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 9.3e-28 129.8 769 26.0
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 3.6e-24 117.9 636 30.0
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 1.8e-23 115.5 144 51.4
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 7.9e-19 100.1 824 25.5
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 3.9e-18 97.8 839 24.8
MSTRG.7045 Avicennia marina HOM05D005664 ORTHO05D006509 1.6e-16 92.4 88 55.7
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 3.2e-12 78.2 202 35.1
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 4.6e-11 74.3 837 23.8
Psat6g196680 Pisum sativum HOM05D005664 ORTHO05D006509 1.0e-10 73.2 113 36.3
Actinidia33104 Actinidia chinensis HOM05D005664 ORTHO05D006509 1.1e-09 69.7 47 68.1
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 4.3e-09 67.8 879 23.4
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 6.3e-08 63.9 818 24.3


User provided reference genes

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