Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc12.33 Carica papaya HOM05D005048 ORTHO05D006420 4.6e-69 264.2 116 100.0
Migut.D01920 Erythranthe guttata HOM05D005048 ORTHO05D006420 6.5e-15 84.3 118 39.0
TWI60G0019 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 1.5e-14 83.2 118 39.0
GSVIVG01015352001 Vitis vinifera HOM05D005048 ORTHO05D006420 2.5e-14 82.4 118 37.3
Hma1.2p1_1151F.1_g261870 Hydrangea macrophylla HOM05D005048 ORTHO05D006420 4.2e-14 81.6 118 38.1
SalBow2G2764 Salvia bowleyana HOM05D005048 ORTHO05D006420 4.2e-14 81.6 118 39.0
Oeu026966.2 Olea europaea HOM05D005048 ORTHO05D006420 7.2e-14 80.9 118 38.1
Ah.14g082380 Amaranthus hybridus HOM05D005048 ORTHO05D006420 1.2e-13 80.1 118 36.4
Sc08g0007680 Simmondsia chinensis HOM05D005048 ORTHO05D006420 1.2e-13 80.1 118 36.4
Actinidia32670 Actinidia chinensis HOM05D005048 ORTHO05D006420 1.6e-13 79.7 118 39.0
Sabra17G0098100 Salix brachista HOM05D005048 ORTHO05D006420 1.6e-13 79.7 121 39.7
Lj7C657T3 Lonicera japonica HOM05D005048 ORTHO05D006420 2.1e-13 79.3 118 38.1
Aqoxy1G00313 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 2.7e-13 79.0 118 36.4
Cfa003227 Carpinus fangiana HOM05D005048 ORTHO05D006420 2.7e-13 79.0 119 35.3
Duzib168G1040 Durio zibethinus HOM05D005048 ORTHO05D006420 3.6e-13 78.6 118 39.0
MD02G1057100 Malus domestica HOM05D005048 ORTHO05D006420 3.6e-13 78.6 118 35.6
Prupe.7G225700 Prunus persica HOM05D005048 ORTHO05D006420 3.6e-13 78.6 118 35.6
EL10Ac8g18435 Beta vulgaris HOM05D005048 ORTHO05D006420 4.7e-13 78.2 117 36.8
CAN.G1379.35 Capsicum annuum HOM05D005048 ORTHO05D006420 4.7e-13 78.2 118 37.3
DCAR_009632 Daucus carota HOM05D005048 ORTHO05D006420 4.7e-13 78.2 118 36.4
Dinv41630 Davidia involucrata HOM05D005048 ORTHO05D006420 4.7e-13 78.2 118 39.0
TWI81G0001 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 4.7e-13 78.2 118 38.1
Ciclev10008139m.g Citrus clementina HOM05D005048 ORTHO05D006420 6.1e-13 77.8 118 39.0
Glyma.05G229400 Glycine max HOM05D005048 ORTHO05D006420 8.0e-13 77.4 118 39.0
Glyma.14G218300 Glycine max HOM05D005048 ORTHO05D006420 8.0e-13 77.4 118 39.0
Manes.14G158111 Manihot esculenta HOM05D005048 ORTHO05D006420 8.0e-13 77.4 118 39.0
Aqoxy5G01302 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 1.0e-12 77.0 118 35.6
Peaxi162Scf00231g00512 Petunia axillaris HOM05D005048 ORTHO05D006420 1.0e-12 77.0 67 50.7
Nitab4.5_0004090g0040 Nicotiana tabacum HOM05D005048 ORTHO05D006420 1.4e-12 76.6 67 50.7
RcHm_v2.0_Chr2g0091251 Rosa chinensis HOM05D005048 ORTHO05D006420 1.4e-12 76.6 118 35.6
arahy.Tifrunner.gnm1.ann1.T6QICJ Arachis hypogaea HOM05D005048 ORTHO05D006420 1.8e-12 76.3 118 38.1
arahy.Tifrunner.gnm1.ann1.TTP0Q7 Arachis hypogaea HOM05D005048 ORTHO05D006420 1.8e-12 76.3 118 38.1
ECA240G4205 Erigeron canadensis HOM05D005048 ORTHO05D006420 1.8e-12 76.3 118 36.4
Potri.017G118801 Populus trichocarpa HOM05D005048 ORTHO05D006420 1.8e-12 76.3 121 38.8
Hund09223 Selenicereus undatus HOM05D005048 ORTHO05D006420 1.8e-12 76.3 121 37.2
ATR0315G096 Amborella trichopoda HOM05D005048 ORTHO05D006420 2.3e-12 75.9 118 35.6
Dinv36669 Davidia involucrata HOM05D005048 ORTHO05D006420 2.3e-12 75.9 118 36.4
Lalb_Chr05g0223041 Lupinus albus HOM05D005048 ORTHO05D006420 2.3e-12 75.9 118 38.1
Medtr8g103060 Medicago truncatula HOM05D005048 ORTHO05D006420 2.3e-12 75.9 118 37.3
QL10p015858 Quercus lobata HOM05D005048 ORTHO05D006420 2.3e-12 75.9 118 37.3
TAR383G0565 Trochodendron aralioides HOM05D005048 ORTHO05D006420 2.3e-12 75.9 118 33.9
Haze_25781 Corylus avellana HOM05D005048 ORTHO05D006420 3.0e-12 75.5 67 46.3
Gohir.A07G004800 Gossypium hirsutum HOM05D005048 ORTHO05D006420 3.0e-12 75.5 118 37.3
Gorai.001G007100 Gossypium raimondii HOM05D005048 ORTHO05D006420 3.0e-12 75.5 118 36.4
Nitab4.5_0000399g0090 Nicotiana tabacum HOM05D005048 ORTHO05D006420 3.0e-12 75.5 118 36.4
Thecc.09G106000 Theobroma cacao HOM05D005048 ORTHO05D006420 3.0e-12 75.5 118 38.1
FAN28G0981 Fragaria x ananassa HOM05D005048 ORTHO05D006420 4.0e-12 75.1 118 34.7
Gohir.D07G007400 Gossypium hirsutum HOM05D005048 ORTHO05D006420 4.0e-12 75.1 118 37.3
Ca_17323_v3 Cicer arietinum L. HOM05D005048 ORTHO05D006420 5.2e-12 74.7 118 37.3
Rhsim03G0239600 Rhododendron simsii HOM05D005048 ORTHO05D006420 5.2e-12 74.7 67 47.8
CiPaw.04G161700 Carya illinoinensis HOM05D005048 ORTHO05D006420 6.8e-12 74.3 118 33.9
FAN19G2567 Fragaria x ananassa HOM05D005048 ORTHO05D006420 6.8e-12 74.3 118 34.7
PGR102G2767 Punica granatum HOM05D005048 ORTHO05D006420 6.8e-12 74.3 118 34.7
Solyc01g102490.3 Solanum lycopersicum HOM05D005048 ORTHO05D006420 8.8e-12 73.9 118 35.6
Sopen01g044930 Solanum pennellii HOM05D005048 ORTHO05D006420 8.8e-12 73.9 118 35.6
PGSC0003DMG400018273 Solanum tuberosum HOM05D005048 ORTHO05D006420 8.8e-12 73.9 118 35.6
TPR.G23489 Trifolium pratense HOM05D005048 ORTHO05D006420 8.8e-12 73.9 118 37.3
Atru.chr7.1383 Acer truncatum HOM05D005048 ORTHO05D006420 1.2e-11 73.6 67 47.8
AagrBONN_evm.TU.Sc2ySwM_344.4229 Anthoceros agrestis HOM05D005048 ORTHO05D006420 1.2e-11 73.6 118 35.6
Nn2g11663 Nelumbo nucifera HOM05D005048 ORTHO05D006420 1.2e-11 73.6 118 34.7
Sed0003567 Sechium edule HOM05D005048 ORTHO05D006420 1.2e-11 73.6 118 33.9
MELO3C006282.2 Cucumis melo HOM05D005048 ORTHO05D006420 1.5e-11 73.2 118 33.9
FvH4_1g05550 Fragaria vesca HOM05D005048 ORTHO05D006420 1.5e-11 73.2 118 36.4
SEGI_35536 Sequoiadendron giganteum HOM05D005048 ORTHO05D006420 1.5e-11 73.2 118 36.4
HanXRQChr03g0061391 Helianthus annuus HOM05D005048 ORTHO05D006420 2.0e-11 72.8 118 35.6
CsaV3_3G010630 Cucumis sativus L. HOM05D005048 ORTHO05D006420 2.6e-11 72.4 118 33.9
Lj4g0020985 Lotus japonicus HOM05D005048 ORTHO05D006420 2.6e-11 72.4 118 36.4
Mapoly0125s0046 Marchantia polymorpha HOM05D005048 ORTHO05D006420 2.6e-11 72.4 118 35.6
Oeu035980.2 Olea europaea HOM05D005048 ORTHO05D006420 2.6e-11 72.4 46 65.2
THA.LOC104799066 Tarenaya hassleriana HOM05D005048 ORTHO05D006420 2.6e-11 72.4 67 47.8
Phvul.002G311600 Phaseolus vulgaris HOM05D005048 ORTHO05D006420 3.4e-11 72.0 118 36.4
SGA_v2.0_scaffold58G20419 Striga asiatica HOM05D005048 ORTHO05D006420 3.4e-11 72.0 118 34.7
FAN23G2083 Fragaria x ananassa HOM05D005048 ORTHO05D006420 4.4e-11 71.6 118 34.7
Os02g0277600 Oryza sativa ssp. japonica HOM05D005048 ORTHO05D006420 4.4e-11 71.6 124 33.1
Psat7g014800 Pisum sativum HOM05D005048 ORTHO05D006420 5.7e-11 71.2 67 49.3
VMungo0251G3001 Vigna mungo HOM05D005048 ORTHO05D006420 5.7e-11 71.2 67 49.3
AUR62010945 Chenopodium quinoa HOM05D005048 ORTHO05D006420 7.5e-11 70.9 46 58.7
COL.COLO4_37106 Corchorus olitorius HOM05D005048 ORTHO05D006420 7.5e-11 70.9 96 42.7
HPP92_003926 Vanilla planifolia HOM05D005048 ORTHO05D006420 7.5e-11 70.9 67 47.8
Cc01_g04910 Coffea canephora HOM05D005048 ORTHO05D006420 9.8e-11 70.5 67 47.8
unitig_0.g799 Utricularia gibba HOM05D005048 ORTHO05D006420 9.8e-11 70.5 116 37.9
AL7G19480 Arabidopsis lyrata HOM05D005048 ORTHO05D006420 1.3e-10 70.1 118 34.7
Carub.0007s0821 Capsella rubella HOM05D005048 ORTHO05D006420 1.3e-10 70.1 118 34.7
CSS0046369 Camellia sinensis var. sinensis HOM05D005048 ORTHO05D006420 1.7e-10 69.7 67 44.8
Lsat_1_v5_gn_7_41421 Lactuca sativa HOM05D005048 ORTHO05D006420 1.7e-10 69.7 118 34.7
Aa31LG2G18290 Aethionema arabicum HOM05D005048 ORTHO05D006420 2.2e-10 69.3 118 34.7
Cpa.g.sc23.64 Carica papaya HOM05D005048 ORTHO05D006420 2.2e-10 69.3 118 34.7
Eucgr.C03804 Eucalyptus grandis HOM05D005048 ORTHO05D006420 2.2e-10 69.3 118 35.6
Pp3c9_14820 Physcomitrium patens HOM05D005048 ORTHO05D006420 2.2e-10 69.3 118 36.4
Sp7g30130 Schrenkiella parvula HOM05D005048 ORTHO05D006420 2.2e-10 69.3 118 34.7
BcaB08g35458 Brassica carinata HOM05D005048 ORTHO05D006420 2.8e-10 68.9 118 34.7
A10p08040 Brassica napus HOM05D005048 ORTHO05D006420 2.8e-10 68.9 118 34.7
BcaC04g20784 Brassica carinata HOM05D005048 ORTHO05D006420 3.7e-10 68.6 118 33.9
C09p39250 Brassica napus HOM05D005048 ORTHO05D006420 3.7e-10 68.6 118 33.9
BolC9t56804H Brassica oleracea HOM05D005048 ORTHO05D006420 3.7e-10 68.6 118 33.9
ClCG05G003020 Citrullus lanatus HOM05D005048 ORTHO05D006420 3.7e-10 68.6 118 34.7
AT4G32360 Arabidopsis thaliana HOM05D005048 ORTHO05D006420 4.8e-10 68.2 118 33.9
FAN26G3268 Fragaria x ananassa HOM05D005048 ORTHO05D006420 4.8e-10 68.2 97 37.1
Zm00001eb203380 Zea mays HOM05D005048 ORTHO05D006420 4.8e-10 68.2 123 33.3
Zm00001eb203390 Zea mays HOM05D005048 ORTHO05D006420 4.8e-10 68.2 123 33.3
Thhalv10013379m.g Eutrema salsugineum HOM05D005048 ORTHO05D006420 6.3e-10 67.8 118 33.9
BraSC35t45995Z Brassica rapa HOM05D005048 ORTHO05D006420 8.3e-10 67.4 118 33.9
Zm00001eb203400 Zea mays HOM05D005048 ORTHO05D006420 1.1e-09 67.0 123 32.5
AUR62007677 Chenopodium quinoa HOM05D000716 ORTHO05D008300 3.1e-09 65.5 46 54.3
PSO210G5559 Papaver somniferum HOM05D005048 ORTHO05D006420 7.0e-09 64.3 67 43.3
PSO210G2605 Papaver somniferum HOM05D005048 ORTHO05D006420 9.1e-09 63.9 67 43.3
CARHR240270 Cardamine hirsuta HOM05D005048 ORTHO05D006420 2.7e-08 62.4 96 36.5
Cre13.g562550 Chlamydomonas reinhardtii HOM05D005048 ORTHO05D006420 2.7e-08 62.4 67 43.3
SHI02718 Sapria himalayana HOM05D005048 ORTHO05D006420 2.7e-08 62.4 118 32.2
vmacro06232 Vaccinium macrocarpon HOM05D005048 ORTHO05D006420 2.7e-08 62.4 67 41.8
SMO361G0652 Selaginella moellendorffii HOM05D005048 ORTHO05D006420 2.9e-07 58.9 119 30.3
CBR_g50003 Chara braunii HOM05D005048 ORTHO05D006420 3.8e-07 58.5 119 31.1
AUR62021458 Chenopodium quinoa HOM05D005048 ORTHO05D006420 4.2e-06 55.1 67 37.3
MBI01_g28841_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 5.5e-06 54.7 101 30.7


User provided reference genes

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