Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc12.202 Carica papaya HOM05D003532 ORTHO05D003298 1.0e-260 902.9 454 100.0
CiPaw.11G200200 Carya illinoinensis HOM05D003532 ORTHO05D003298 7.5e-216 753.8 459 81.7
COL.COLO4_09777 Corchorus olitorius HOM05D003532 ORTHO05D003298 1.9e-211 739.2 458 79.3
Rhsim06G0226200 Rhododendron simsii HOM05D003532 ORTHO05D003298 1.9e-211 739.2 454 79.5
Duzib213G0377 Durio zibethinus HOM05D003532 ORTHO05D003298 3.3e-211 738.4 457 80.3
TWI39G0358 Tripterygium wilfordii HOM05D003532 ORTHO05D003298 1.2e-210 736.5 466 79.8
Prupe.4G231800 Prunus persica HOM05D003532 ORTHO05D003298 1.6e-210 736.1 460 79.6
Cfa020236 Carpinus fangiana HOM05D003532 ORTHO05D003298 2.8e-210 735.3 456 79.6
vmacro11564 Vaccinium macrocarpon HOM05D003532 ORTHO05D003298 6.2e-210 734.2 454 79.7
Manes.15G064000 Manihot esculenta HOM05D003532 ORTHO05D003298 8.0e-210 733.8 461 78.1
Eucgr.F00625 Eucalyptus grandis HOM05D003532 ORTHO05D003298 1.4e-209 733.0 455 79.8
Thecc.07G023400 Theobroma cacao HOM05D003532 ORTHO05D003298 3.1e-209 731.9 457 79.9
Dinv10304 Davidia involucrata HOM05D003532 ORTHO05D003298 9.8e-208 726.9 458 78.4
Medtr3g055970 Medicago truncatula HOM05D003532 ORTHO05D003298 1.7e-207 726.1 454 77.3
QL08p005936 Quercus lobata HOM05D003532 ORTHO05D003298 1.7e-207 726.1 455 78.7
Gohir.A01G086600 Gossypium hirsutum HOM05D003532 ORTHO05D003298 2.9e-207 725.3 457 77.9
Lalb_Chr15g0081911 Lupinus albus HOM05D003532 ORTHO05D003298 8.3e-207 723.8 455 77.4
Phvul.006G052900 Phaseolus vulgaris HOM05D003532 ORTHO05D003298 1.4e-206 723.0 453 77.5
Haze_09779 Corylus avellana HOM05D003532 ORTHO05D003298 2.4e-206 722.2 456 78.5
MD03G1189500 Malus domestica HOM05D003532 ORTHO05D003298 4.1e-206 721.5 458 78.2
TPR.G1921 Trifolium pratense HOM05D003532 ORTHO05D003298 5.4e-206 721.1 454 76.7
VMungo0540G1592 Vigna mungo HOM05D003532 ORTHO05D003298 1.2e-205 719.9 454 76.9
Gohir.D01G072800 Gossypium hirsutum HOM05D003532 ORTHO05D003298 2.0e-205 719.2 457 77.2
Glyma.08G325400 Glycine max HOM05D003532 ORTHO05D003298 3.5e-205 718.4 454 77.5
Gorai.002G095800 Gossypium raimondii HOM05D003532 ORTHO05D003298 6.0e-205 717.6 457 77.0
arahy.Tifrunner.gnm1.ann1.5HZ9E9 Arachis hypogaea HOM05D003532 ORTHO05D003298 7.8e-205 717.2 453 77.5
THA.LOC104811650 Tarenaya hassleriana HOM05D003532 ORTHO05D003298 3.9e-204 714.9 455 77.6
Potri.001G361200 Populus trichocarpa HOM05D003532 ORTHO05D003298 1.9e-203 712.6 461 76.8
Glyma.18G081800 Glycine max HOM05D003532 ORTHO05D003298 2.5e-203 712.2 454 76.4
Psat5g171200 Pisum sativum HOM05D003532 ORTHO05D003298 4.3e-203 711.4 454 75.3
CSS0034495 Camellia sinensis var. sinensis HOM05D003532 ORTHO05D003298 7.3e-203 710.7 457 77.7
FAN25G2872 Fragaria x ananassa HOM05D003532 ORTHO05D003298 2.3e-201 705.7 462 77.1
Sabra16G0238200 Salix brachista HOM05D003532 ORTHO05D003298 5.2e-201 704.5 461 75.5
ECA240G1125 Erigeron canadensis HOM05D003532 ORTHO05D003298 8.9e-201 703.7 454 75.6
RcHm_v2.0_Chr5g0042451 Rosa chinensis HOM05D003532 ORTHO05D003298 1.5e-200 703.0 465 75.9
PGR083G2272 Punica granatum HOM05D003532 ORTHO05D003298 2.6e-200 702.2 454 76.4
Oeu019616.1 Olea europaea HOM05D003532 ORTHO05D003298 3.7e-199 698.4 453 75.1
Ca_16739_v3 Cicer arietinum L. HOM05D003532 ORTHO05D003298 6.4e-199 697.6 454 74.9
Sed0014342 Sechium edule HOM05D003532 ORTHO05D003298 3.2e-198 695.3 457 74.6
Ciclev10007256m.g Citrus clementina HOM05D003532 ORTHO05D003298 9.2e-198 693.7 459 75.4
Nitab4.5_0003218g0080 Nicotiana tabacum HOM05D003532 ORTHO05D003298 6.0e-197 691.0 455 75.4
Nn1g07430 Nelumbo nucifera HOM05D003532 ORTHO05D003298 1.0e-196 690.3 460 74.8
Cc05_g14600 Coffea canephora HOM05D003532 ORTHO05D003298 1.3e-196 689.9 453 73.3
ClCG09G021030 Citrullus lanatus HOM05D003532 ORTHO05D003298 1.7e-196 689.5 457 74.6
Aqoxy1G04019 Aquilegia oxysepala HOM05D003532 ORTHO05D003298 6.6e-196 687.6 464 75.0
Ah.06g181150 Amaranthus hybridus HOM05D003532 ORTHO05D003298 1.5e-195 686.4 456 74.8
TAR631G0007 Trochodendron aralioides HOM05D003532 ORTHO05D003298 1.5e-195 686.4 462 74.9
Atru.chr2.3624 Acer truncatum HOM05D003532 ORTHO05D003298 1.9e-195 686.0 459 75.6
FAN11G2286 Fragaria x ananassa HOM05D003532 ORTHO05D003298 5.6e-195 684.5 462 74.7
Lsat_1_v5_gn_0_15220 Lactuca sativa HOM05D003532 ORTHO05D003298 9.5e-195 683.7 454 74.7
FvH4_3g23950 Fragaria vesca HOM05D003532 ORTHO05D003298 2.8e-194 682.2 462 74.5
AL8G31090 Arabidopsis lyrata HOM05D003532 ORTHO05D003298 3.6e-194 681.8 456 74.1
Peaxi162Scf00568g00016 Petunia axillaris HOM05D003532 ORTHO05D003298 3.6e-194 681.8 455 74.7
Lj6g0018545 Lotus japonicus HOM05D003532 ORTHO05D003298 4.7e-194 681.4 454 73.1
FAN21G0475 Fragaria x ananassa HOM05D003532 ORTHO05D003298 6.2e-194 681.0 462 74.7
CAN.G1166.12 Capsicum annuum HOM05D003532 ORTHO05D003298 1.8e-193 679.5 455 73.8
FAN16G2517 Fragaria x ananassa HOM05D003532 ORTHO05D003298 4.0e-193 678.3 462 74.0
Sc07g0002980 Simmondsia chinensis HOM05D003532 ORTHO05D003298 5.2e-193 677.9 455 74.1
AT5G55540 Arabidopsis thaliana HOM05D003532 ORTHO05D003298 1.5e-192 676.4 455 73.6
Hund23137 Selenicereus undatus HOM05D003532 ORTHO05D003298 2.6e-192 675.6 455 74.7
CARHR268860 Cardamine hirsuta HOM05D003532 ORTHO05D003298 9.9e-192 673.7 455 72.7
FAN25G3696 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.7e-191 672.9 462 74.0
CANSAT11G0309 Cannabis sativa HOM05D003532 ORTHO05D003298 4.9e-191 671.4 460 73.3
Carub.0008s1589 Capsella rubella HOM05D003532 ORTHO05D003298 1.1e-190 670.2 454 72.5
Solyc03g112750.4 Solanum lycopersicum HOM05D003532 ORTHO05D003298 2.4e-190 669.1 455 73.2
Sopen03g031830 Solanum pennellii HOM05D003532 ORTHO05D003298 9.2e-190 667.2 455 72.7
Nitab4.5_0002423g0060 Nicotiana tabacum HOM05D003532 ORTHO05D003298 1.6e-189 666.4 455 73.2
BcaB08g35909 Brassica carinata HOM05D003532 ORTHO05D003298 2.7e-189 665.6 455 72.7
AUR62015940 Chenopodium quinoa HOM05D003532 ORTHO05D003298 2.7e-189 665.6 454 72.2
A10p12730 Brassica napus HOM05D003532 ORTHO05D003298 9.6e-187 657.1 455 71.0
BraA10t43365Z Brassica rapa HOM05D003532 ORTHO05D003298 9.6e-187 657.1 455 71.0
PGSC0003DMG400018160 Solanum tuberosum HOM05D003532 ORTHO05D003298 9.6e-187 657.1 455 71.9
C09p46210 Brassica napus HOM05D003532 ORTHO05D003298 1.6e-186 656.4 455 71.2
MELO3C024898.2 Cucumis melo HOM05D003532 ORTHO05D003298 1.6e-186 656.4 457 71.6
BolC9t57486H Brassica oleracea HOM05D003532 ORTHO05D003298 2.1e-186 656.0 455 71.2
CsaV3_7G018660 Cucumis sativus L. HOM05D003532 ORTHO05D003298 3.1e-185 652.1 457 71.1
Thhalv10012444m.g Eutrema salsugineum HOM05D003532 ORTHO05D003298 4.0e-185 651.7 454 70.5
Sp6g17430 Schrenkiella parvula HOM05D003532 ORTHO05D003298 1.5e-184 649.8 455 70.3
EL10Ac4g07624 Beta vulgaris HOM05D003532 ORTHO05D003298 7.6e-184 647.5 432 74.5
PSO210G6712 Papaver somniferum HOM05D003532 ORTHO05D003298 8.4e-183 644.0 452 69.7
SalBow8G0547 Salvia bowleyana HOM05D003532 ORTHO05D003298 7.3e-179 630.9 463 68.7
Migut.M01683 Erythranthe guttata HOM05D003532 ORTHO05D003298 2.4e-174 615.9 456 68.4
DCAR_016632 Daucus carota HOM05D003532 ORTHO05D003298 6.2e-170 601.3 460 66.3
Actinidia00098 Actinidia chinensis HOM05D003532 ORTHO05D003298 6.4e-167 591.3 458 67.2
SHI26496 Sapria himalayana HOM05D003532 ORTHO05D003298 1.3e-164 583.6 461 63.3
unitig_899.g15279 Utricularia gibba HOM05D003532 ORTHO05D003298 3.9e-156 555.4 457 60.4
Aa31LG3G11480 Aethionema arabicum HOM05D003532 ORTHO05D003298 3.3e-147 525.8 436 62.4
ATR0712G118 Amborella trichopoda HOM05D003532 ORTHO05D003298 3.1e-145 519.2 460 55.9
HPP92_012225 Vanilla planifolia HOM05D003532 ORTHO05D003298 4.5e-144 515.4 423 60.3
SGA_v2.0_scaffold171G38893 Striga asiatica HOM05D003532 ORTHO05D003298 2.9e-143 512.7 454 58.1
Zm00001eb057430 Zea mays HOM05D003532 ORTHO05D003298 3.7e-138 495.7 456 55.3
Lj1P884T43 Lonicera japonica HOM05D003532 ORTHO05D003298 6.9e-137 491.5 456 59.6
MBI19_g37319_MAGBIO Magnolia biondii HOM05D003532 ORTHO05D003298 7.5e-115 418.3 367 59.7
AUR62040668 Chenopodium quinoa HOM05D003532 ORTHO05D003298 7.7e-112 408.3 287 70.0
GSVIVG01037769001 Vitis vinifera HOM05D003532 ORTHO05D003298 8.0e-101 371.7 454 49.3
Actinidia04774 Actinidia chinensis HOM05D003532 ORTHO05D003298 3.6e-93 346.3 459 46.8
AUR62040669 Chenopodium quinoa HOM05D003532 ORTHO05D003298 4.5e-59 233.0 154 73.4
MD11G1205800 Malus domestica HOM05D003532 ORTHO05D003298 1.1e-57 228.4 172 69.8
MD11G1205700 Malus domestica HOM05D003532 ORTHO05D003298 7.1e-49 199.1 148 66.2
AagrBONN_evm.TU.Sc2ySwM_362.2762 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.3e-44 183.0 460 30.0
CDE04G0250 Ceratophyllum demersum HOM05D003532 ORTHO05D003298 1.7e-34 151.4 163 49.1
AagrBONN_evm.TU.Sc2ySwM_368.1056 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.1e-30 138.7 455 28.6
Pp3c3_24130 Physcomitrium patens HOM05D003532 ORTHO05D003298 1.7e-26 124.8 454 26.4
AagrBONN_evm.TU.Sc2ySwM_368.264 Anthoceros agrestis HOM05D003532 ORTHO05D003298 8.5e-26 122.5 494 24.1
AagrBONN_evm.TU.Sc2ySwM_368.330 Anthoceros agrestis HOM05D002844 ORTHO05D003298 3.2e-25 120.6 493 24.1
Pp3c10_20720 Physcomitrium patens HOM05D003532 ORTHO05D003298 3.2e-25 120.6 451 25.3
AagrBONN_evm.TU.Sc2ySwM_368.290 Anthoceros agrestis HOM05D002844 ORTHO05D003298 2.7e-24 117.5 494 23.9
CBR_g38599 Chara braunii HOM05D003532 ORTHO05D003298 3.6e-24 117.1 455 25.7
CBR_g38589 Chara braunii HOM05D003532 ORTHO05D003298 6.1e-24 116.3 465 25.2
CBR_g38594 Chara braunii HOM05D003532 ORTHO05D003298 1.4e-23 115.2 462 24.7
CBR_g12185 Chara braunii HOM05D003532 ORTHO05D003298 2.0e-22 111.3 468 25.4
CBR_g40030 Chara braunii HOM05D007859 ORTHO05D003298 2.2e-21 107.8 472 24.6
AagrBONN_evm.TU.Sc2ySwM_368.274 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.8e-21 107.5 398 24.4
AagrBONN_evm.TU.Sc2ySwM_344.5368 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.8e-21 106.7 400 23.8
CBR_g38597 Chara braunii HOM05D003532 ORTHO05D003298 1.4e-20 105.1 461 24.7
AagrBONN_evm.TU.Sc2ySwM_362.556 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.1e-20 104.0 489 24.5
AagrBONN_evm.TU.Sc2ySwM_362.1324 Anthoceros agrestis HOM05D002844 ORTHO05D003298 5.3e-20 103.2 471 24.6
CBR_g12864 Chara braunii HOM05D003532 ORTHO05D003298 2.2e-18 97.8 490 25.7
CBR_g40961 Chara braunii HOM05D003532 ORTHO05D000353 8.5e-18 95.9 457 24.9
Mapoly0182s0017 Marchantia polymorpha HOM05D003532 ORTHO05D003298 8.5e-18 95.9 476 24.2
Mapoly0157s0002 Marchantia polymorpha HOM05D003532 ORTHO05D003298 9.4e-17 92.4 448 22.5
CBR_g45627 Chara braunii HOM05D003532 ORTHO05D003298 2.3e-15 87.8 507 25.0
PGSC0003DMG401018159 Solanum tuberosum HOM05D003532 ORTHO05D003298 1.1e-14 85.5 58 70.7
AagrBONN_evm.TU.Sc2ySwM_368.626 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.0e-14 84.7 159 34.6
CBR_g12867 Chara braunii HOM05D000019 ORTHO05D003298 2.6e-14 84.3 489 24.7
Lsat_1_v5_gn_3_17020 Lactuca sativa HOM05D003532 ORTHO05D003298 4.4e-14 83.6 84 51.2
CBR_g38576 Chara braunii HOM05D003532 ORTHO05D003298 5.7e-14 83.2 509 21.8
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 2.2e-13 81.3 484 22.3
CBR_g46414 Chara braunii HOM05D003532 ORTHO05D003298 8.2e-13 79.3 473 22.0
AagrBONN_evm.TU.Sc2ySwM_340.458 Anthoceros agrestis HOM05D002844 ORTHO05D010627 4.1e-12 77.0 176 29.5
AagrBONN_evm.TU.Sc2ySwM_368.360__361 Anthoceros agrestis HOM05D002844 ORTHO05D003298 5.3e-12 76.6 267 28.1
AagrBONN_evm.TU.Sc2ySwM_362.449 Anthoceros agrestis HOM05D002844 ORTHO05D010627 9.1e-12 75.9 136 31.6
AagrBONN_evm.TU.Sc2ySwM_228.5542 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.6e-11 75.1 192 27.1
CBR_g85241 Chara braunii HOM05D003532 ORTHO05D003298 2.0e-11 74.7 251 25.1
AagrBONN_evm.TU.Sc2ySwM_228.83 Anthoceros agrestis HOM05D002844 ORTHO05D010627 2.6e-11 74.3 189 30.2
AagrBONN_evm.TU.Sc2ySwM_117.4056 Anthoceros agrestis HOM05D002844 ORTHO05D003298 5.9e-11 73.2 121 33.1
AagrBONN_evm.TU.Sc2ySwM_362.458 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.0e-10 72.4 136 29.4
AagrBONN_evm.TU.Sc2ySwM_362.460 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.7e-10 71.6 136 29.4
CBR_g36281 Chara braunii HOM05D003532 ORTHO05D003298 1.7e-10 71.6 472 22.5
AagrBONN_evm.TU.Sc2ySwM_117.3748 Anthoceros agrestis HOM05D002844 ORTHO05D010627 2.2e-10 71.2 132 31.8
AagrBONN_evm.TU.Sc2ySwM_340.456 Anthoceros agrestis HOM05D002844 ORTHO05D010627 2.9e-10 70.9 184 29.9
AagrBONN_evm.TU.Sc2ySwM_362.1906 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.8e-10 70.5 383 23.2
CBR_g12862 Chara braunii HOM05D003532 ORTHO05D003298 8.5e-10 69.3 373 23.6
AagrBONN_evm.TU.Sc2ySwM_117.4103 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.1e-09 68.9 135 28.1
AagrBONN_evm.TU.Sc2ySwM_362.407 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.1e-09 68.9 136 30.9
AagrBONN_evm.TU.Sc2ySwM_340.760 Anthoceros agrestis HOM05D008597 ORTHO05D003298 3.2e-09 67.4 157 31.2
AagrBONN_evm.TU.Sc2ySwM_368.2565 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.2e-09 67.4 126 34.9
AagrBONN_evm.TU.Sc2ySwM_344.5219 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.5e-09 66.6 117 28.2
AagrBONN_evm.TU.Sc2ySwM_362.1938 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.5e-09 66.6 475 21.3
AagrBONN_evm.TU.Sc2ySwM_117.4062 Anthoceros agrestis HOM05D003532 ORTHO05D015853 1.2e-08 65.5 370 23.5
AagrBONN_evm.TU.Sc2ySwM_344.5221 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.2e-08 65.5 131 27.5
AagrBONN_evm.TU.Sc2ySwM_362.995 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.6e-08 65.1 113 31.9
AagrBONN_evm.TU.Sc2ySwM_368.236 Anthoceros agrestis HOM05D003532 ORTHO05D015853 1.6e-08 65.1 244 27.0
AagrBONN_evm.TU.Sc2ySwM_368.199 Anthoceros agrestis HOM05D002844 ORTHO05D003298 2.7e-08 64.3 165 29.1
Mapoly0068s0033 Marchantia polymorpha HOM05D003532 ORTHO05D003298 2.3e-07 61.2 134 29.1
AagrBONN_evm.TU.Sc2ySwM_362.264 Anthoceros agrestis HOM05D002844 ORTHO05D010627 5.7e-06 56.6 75 38.7
AagrBONN_evm.TU.Sc2ySwM_344.1379 Anthoceros agrestis HOM05D003532 ORTHO05D015853 7.5e-06 56.2 195 26.7


User provided reference genes

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