Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc12.150 Carica papaya HOM05D002413 ORTHO05D002638 1.1e-22 110.5 153 100.0
COL.COLO4_09825 Corchorus olitorius HOM05D002413 ORTHO05D002638 1.7e-15 86.7 153 86.3
Glyma.18G077300 Glycine max HOM05D002413 ORTHO05D002638 3.9e-15 85.5 61 82.0
Glyma.18G077400 Glycine max HOM05D002413 ORTHO05D002638 3.9e-15 85.5 61 85.2
Duzib084G0378 Durio zibethinus HOM05D002413 ORTHO05D002638 5.1e-15 85.1 153 85.0
Duzib068G0761 Durio zibethinus HOM05D002413 ORTHO05D002638 8.6e-15 84.3 153 71.2
QL08p004208 Quercus lobata HOM05D002413 ORTHO05D002638 4.3e-14 82.0 60 68.3
Gohir.D11G035600 Gossypium hirsutum HOM05D002413 ORTHO05D002638 5.6e-14 81.6 153 73.2
arahy.Tifrunner.gnm1.ann1.BMQ6HD Arachis hypogaea HOM05D002413 ORTHO05D002638 1.2e-13 80.5 61 80.3
Gohir.A12G179500 Gossypium hirsutum HOM05D002413 ORTHO05D002638 1.2e-13 80.5 60 71.7
Gorai.008G195400 Gossypium raimondii HOM05D002413 ORTHO05D002638 1.2e-13 80.5 60 71.7
Glyma.08G329500 Glycine max HOM05D002413 ORTHO05D002638 1.6e-13 80.1 61 77.0
Glyma.08G329400 Glycine max HOM05D002413 ORTHO05D002638 2.1e-13 79.7 61 78.7
VMungo0540G2061 Vigna mungo HOM05D002413 ORTHO05D002638 2.1e-13 79.7 61 82.0
Gohir.A11G032300 Gossypium hirsutum HOM05D002413 ORTHO05D002638 2.8e-13 79.3 58 67.2
Gorai.007G038400 Gossypium raimondii HOM05D002413 ORTHO05D002638 4.7e-13 78.6 59 66.1
TWI39G1150 Tripterygium wilfordii HOM05D002413 ORTHO05D002638 1.8e-12 76.6 153 88.2
Hund01896 Selenicereus undatus HOM05D002413 ORTHO05D002638 3.1e-12 75.9 45 80.0
Gohir.D12G182100 Gossypium hirsutum HOM05D002413 ORTHO05D002638 6.8e-12 74.7 57 64.9
Phvul.006G057000 Phaseolus vulgaris HOM05D002413 ORTHO05D002638 6.8e-12 74.7 61 73.8
Phvul.006G057100 Phaseolus vulgaris HOM05D002413 ORTHO05D002638 6.8e-12 74.7 61 75.4
Lj6g0025765 Lotus japonicus HOM05D002413 ORTHO05D002638 8.9e-12 74.3 60 61.7
CiPaw.12G137900 Carya illinoinensis HOM05D002413 ORTHO05D002638 1.2e-11 73.9 45 77.8
CANSAT11G2683 Cannabis sativa HOM05D002413 ORTHO05D002638 1.5e-11 73.6 59 67.8
ClCG09G021320 Citrullus lanatus HOM05D002413 ORTHO05D002638 5.8e-11 71.6 60 75.0
CsaV3_7G012660 Cucumis sativus L. HOM05D002413 ORTHO05D002638 5.8e-11 71.6 60 61.7
CsaV3_7G012700 Cucumis sativus L. HOM05D002413 ORTHO05D002638 5.8e-11 71.6 60 61.7
Manes.03G141000 Manihot esculenta HOM05D002413 ORTHO05D002638 5.8e-11 71.6 60 63.3
Medtr3g058990 Medicago truncatula HOM05D002413 ORTHO05D002638 5.8e-11 71.6 59 62.7
Cc05_g14910 Coffea canephora HOM05D002413 ORTHO05D002638 7.6e-11 71.2 61 55.7
Sed0019293 Sechium edule HOM05D002413 ORTHO05D002638 7.6e-11 71.2 60 75.0
Medtr3g059000 Medicago truncatula HOM05D002413 ORTHO05D002638 9.9e-11 70.9 59 62.7
Actinidia05010 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.3e-10 70.5 44 77.3
CSS0033067 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 1.3e-10 70.5 41 82.9
ClCG09G021330 Citrullus lanatus HOM05D002413 ORTHO05D002638 1.3e-10 70.5 60 63.3
Sed0021905 Sechium edule HOM05D002413 ORTHO05D002638 1.3e-10 70.5 60 60.0
MD03G1183300 Malus domestica HOM05D002413 ORTHO05D002638 2.9e-10 69.3 65 72.3
MD11G1200300 Malus domestica HOM05D002413 ORTHO05D002638 2.9e-10 69.3 45 75.6
Prupe.4G242800 Prunus persica HOM05D002413 ORTHO05D002638 2.9e-10 69.3 57 61.4
TAR626G0268 Trochodendron aralioides HOM05D002413 ORTHO05D002638 2.9e-10 69.3 61 55.7
Duzib205G0891 Durio zibethinus HOM05D002413 ORTHO05D002638 3.8e-10 68.9 61 73.8
Lalb_Chr20g0114031 Lupinus albus HOM05D002413 ORTHO05D002638 4.9e-10 68.6 59 59.3
PGR031G0705 Punica granatum HOM05D002413 ORTHO05D002638 4.9e-10 68.6 58 63.8
Hma1.2p1_1402F.1_g281150 Hydrangea macrophylla HOM05D002413 ORTHO05D002638 6.4e-10 68.2 59 59.3
TAR629G2256 Trochodendron aralioides HOM05D002413 ORTHO05D002638 6.4e-10 68.2 44 72.7
Ca_22138_v3 Cicer arietinum L. HOM05D002413 ORTHO05D002638 1.4e-09 67.0 59 59.3
Psat5g169000 Pisum sativum HOM05D002413 ORTHO05D002638 1.9e-09 66.6 43 74.4
Lj6g0021071 Lotus japonicus HOM05D002413 ORTHO05D002638 5.4e-09 65.1 60 71.7
AT5G55670 Arabidopsis thaliana HOM05D002413 ORTHO05D002638 7.1e-09 64.7 58 58.6
A03p13880 Brassica napus HOM05D002413 ORTHO05D002638 9.2e-09 64.3 58 60.3
Nitab4.5_0006508g0030 Nicotiana tabacum HOM05D002413 ORTHO05D002638 9.2e-09 64.3 60 50.0
Peaxi162Scf01164g00123 Petunia axillaris HOM05D002413 ORTHO05D002638 1.2e-08 63.9 45 62.2
AL8G31250 Arabidopsis lyrata HOM05D002413 ORTHO05D002638 2.1e-08 63.2 58 56.9
EL10Ac4g07574 Beta vulgaris HOM05D002413 ORTHO05D002638 2.1e-08 63.2 43 69.8
BcaC01g06386 Brassica carinata HOM05D002413 ORTHO05D002638 2.1e-08 63.2 59 59.3
C03p16330 Brassica napus HOM05D002413 ORTHO05D002638 2.1e-08 63.2 59 59.3
Lalb_Chr20g0114001 Lupinus albus HOM05D002413 ORTHO05D002638 2.1e-08 63.2 58 58.6
BolC3t14056H Brassica oleracea HOM05D002413 ORTHO05D002638 2.7e-08 62.8 58 60.3
BraA03t10691Z Brassica rapa HOM05D002413 ORTHO05D002638 2.7e-08 62.8 59 57.6
Sp6g17580 Schrenkiella parvula HOM05D002413 ORTHO05D002638 2.7e-08 62.8 58 56.9
BcaB01g04355 Brassica carinata HOM05D002413 ORTHO05D002638 3.5e-08 62.4 58 58.6
MSTRG.15794 Avicennia marina HOM05D002413 ORTHO05D002638 4.6e-08 62.0 45 71.1
CARHR268990 Cardamine hirsuta HOM05D002413 ORTHO05D002638 4.6e-08 62.0 58 55.2
Lalb_Chr15g0082051 Lupinus albus HOM05D002413 ORTHO05D002638 4.6e-08 62.0 44 68.2
TWI38G1726 Tripterygium wilfordii HOM05D002413 ORTHO05D002638 4.6e-08 62.0 153 63.4
PSO063G1404 Papaver somniferum HOM05D002413 ORTHO05D002638 1.0e-07 60.8 61 57.4
PSO017G0039 Papaver somniferum HOM05D002413 ORTHO05D002638 1.3e-07 60.5 61 62.3
BcaC04g20206 Brassica carinata HOM05D002413 ORTHO05D002638 1.7e-07 60.1 58 55.2
C09p46690 Brassica napus HOM05D002413 ORTHO05D002638 1.7e-07 60.1 58 55.2
BolC9t57519H Brassica oleracea HOM05D002413 ORTHO05D002638 1.7e-07 60.1 58 55.2
A10p12980 Brassica napus HOM05D002413 ORTHO05D002638 2.3e-07 59.7 58 55.2
BraA10t43392Z Brassica rapa HOM05D002413 ORTHO05D002638 2.3e-07 59.7 58 55.2
Eucgr.F03691 Eucalyptus grandis HOM05D002413 ORTHO05D002638 2.3e-07 59.7 58 53.4
Aa31LG3G11610 Aethionema arabicum HOM05D002413 ORTHO05D002638 6.6e-07 58.2 61 52.5
A02p09570 Brassica napus HOM05D002413 ORTHO05D002638 6.6e-07 58.2 59 52.5
BraA02t06021Z Brassica rapa HOM05D002413 ORTHO05D002638 6.6e-07 58.2 59 52.5
C02p15920 Brassica napus HOM05D002413 ORTHO05D002638 1.1e-06 57.4 61 52.5
FAN25G2842 Fragaria x ananassa HOM05D002413 ORTHO05D002638 1.5e-06 57.0 45 62.2
AUR62017098 Chenopodium quinoa HOM05D002413 ORTHO05D002638 1.9e-06 56.6 41 58.5
Haze_09820 Corylus avellana HOM05D002413 ORTHO05D002638 3.3e-06 55.8 34 79.4
SGA_v2.0_scaffold168G38559 Striga asiatica HOM05D002413 ORTHO05D002638 3.3e-06 55.8 58 55.2
Thecc.07G014400 Theobroma cacao HOM05D002413 ORTHO05D002638 3.3e-06 55.8 33 81.8
Cfa020196 Carpinus fangiana HOM05D002413 ORTHO05D002638 4.3e-06 55.5 30 86.7
Oeu005960.1 Olea europaea HOM05D002413 ORTHO05D002638 5.6e-06 55.1 44 63.6
Atru.chr2.3685 Acer truncatum HOM05D002413 ORTHO05D002638 7.3e-06 54.7 45 62.2
Aqoxy1G01673 Aquilegia oxysepala HOM05D002413 ORTHO05D002638 9.6e-06 54.3 59 52.5
Rhsim06G0229100 Rhododendron simsii HOM05D002413 ORTHO05D002638 9.6e-06 54.3 28 92.9


User provided reference genes

Program Settings