Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc12.130 Carica papaya HOM05D004943 ORTHO05D005953 7.5e-121 437.2 218 100.0
C03p16160 Brassica napus HOM05D004943 ORTHO05D005953 3.5e-62 242.3 150 77.3
BolC3t14040H Brassica oleracea HOM05D004943 ORTHO05D005953 3.5e-62 242.3 150 77.3
COL.COLO4_07727 Corchorus olitorius HOM05D004943 ORTHO05D005953 3.5e-62 242.3 146 80.1
Carub.0008s1627 Capsella rubella HOM05D004943 ORTHO05D005953 7.9e-62 241.1 154 76.6
THA.LOC104813453 Tarenaya hassleriana HOM05D004943 ORTHO05D005953 7.9e-62 241.1 154 77.9
AT5G55940 Arabidopsis thaliana HOM05D004943 ORTHO05D005953 1.3e-61 240.4 154 76.6
CARHR269310 Cardamine hirsuta HOM05D004943 ORTHO05D005953 3.0e-61 239.2 154 76.6
Sp6g17790 Schrenkiella parvula HOM05D004943 ORTHO05D005953 3.0e-61 239.2 154 76.6
A03p13760 Brassica napus HOM05D004943 ORTHO05D005953 3.9e-61 238.8 150 76.0
BcaB05g22236 Brassica carinata HOM05D004943 ORTHO05D005953 5.1e-61 238.4 150 76.0
TWI75G0785 Tripterygium wilfordii HOM05D004943 ORTHO05D005953 6.7e-61 238.0 146 78.1
BcaC04g20187 Brassica carinata HOM05D004943 ORTHO05D005953 8.7e-61 237.7 149 76.5
A10p13120 Brassica napus HOM05D004943 ORTHO05D005953 8.7e-61 237.7 149 76.5
C09p46880 Brassica napus HOM05D004943 ORTHO05D005953 8.7e-61 237.7 149 76.5
BraA03t10679Z Brassica rapa HOM05D004943 ORTHO05D005953 1.1e-60 237.3 150 76.0
BraA10t43408Z Brassica rapa HOM05D004943 ORTHO05D005953 1.1e-60 237.3 149 76.5
Gohir.A04G005400 Gossypium hirsutum HOM05D004943 ORTHO05D005953 1.1e-60 237.3 145 78.6
Gorai.009G451100 Gossypium raimondii HOM05D004943 ORTHO05D005953 1.1e-60 237.3 145 78.6
Duzib170G0808 Durio zibethinus HOM05D004943 ORTHO05D005953 1.9e-60 236.5 145 77.9
BolC9t57538H Brassica oleracea HOM05D004943 ORTHO05D005953 3.3e-60 235.7 149 75.8
Gohir.D05G384300 Gossypium hirsutum HOM05D004943 ORTHO05D005953 3.3e-60 235.7 145 77.9
Thhalv10014684m.g Eutrema salsugineum HOM05D004943 ORTHO05D005953 4.3e-60 235.3 154 74.7
C02p15720 Brassica napus HOM05D004943 ORTHO05D005953 7.4e-60 234.6 154 74.0
Ciclev10009430m.g Citrus clementina HOM05D004943 ORTHO05D005953 7.4e-60 234.6 146 76.0
Duzib213G0469 Durio zibethinus HOM05D004943 ORTHO05D005953 1.6e-59 233.4 145 78.6
Thecc.07G009400 Theobroma cacao HOM05D004943 ORTHO05D005953 2.1e-59 233.0 145 78.6
A02p09420 Brassica napus HOM05D004943 ORTHO05D005953 4.8e-59 231.9 154 72.1
BraA02t06006Z Brassica rapa HOM05D004943 ORTHO05D005953 4.8e-59 231.9 154 72.1
BcaB08g35959 Brassica carinata HOM05D004943 ORTHO05D005953 1.4e-58 230.3 149 73.8
Atru.chr2.3743 Acer truncatum HOM05D004943 ORTHO05D005953 3.1e-58 229.2 142 76.8
Aa31LG3G11850 Aethionema arabicum HOM05D004943 ORTHO05D005953 6.9e-58 228.0 164 71.3
BolC2t07679H Brassica oleracea HOM05D004943 ORTHO05D005953 9.0e-58 227.6 154 72.7
Aa31LG5G11950 Aethionema arabicum HOM05D004943 ORTHO05D005953 1.5e-57 226.9 154 73.4
Sabra16G0243100 Salix brachista HOM05D004943 ORTHO05D005953 2.6e-57 226.1 140 80.7
CiPaw.11G205900 Carya illinoinensis HOM05D004943 ORTHO05D005953 5.8e-57 224.9 137 78.1
Hma1.2p1_0023F.1_g015770 Hydrangea macrophylla HOM05D004943 ORTHO05D005953 1.7e-56 223.4 145 73.8
Potri.001G370200 Populus trichocarpa HOM05D004943 ORTHO05D005953 2.9e-56 222.6 142 76.8
QL08p003376 Quercus lobata HOM05D004943 ORTHO05D005953 6.4e-56 221.5 137 77.4
CiPaw.12G139900 Carya illinoinensis HOM05D004943 ORTHO05D005953 1.1e-55 220.7 137 75.9
Potri.001G370000 Populus trichocarpa HOM05D004943 ORTHO05D005953 1.1e-55 220.7 142 76.1
FAN25G1833 Fragaria x ananassa HOM05D004943 ORTHO05D005953 4.2e-55 218.8 140 74.3
FvH4_3g42640 Fragaria vesca HOM05D004943 ORTHO05D005953 5.5e-55 218.4 137 75.9
FAN11G3459 Fragaria x ananassa HOM05D004943 ORTHO05D005953 5.5e-55 218.4 137 75.9
MD11G1035300 Malus domestica HOM05D004943 ORTHO05D005953 5.5e-55 218.4 137 75.2
Eucgr.F02035 Eucalyptus grandis HOM05D004943 ORTHO05D005953 7.1e-55 218.0 139 74.1
MD03G1030300 Malus domestica HOM05D004943 ORTHO05D005953 9.3e-55 217.6 137 75.2
Manes.15G058100 Manihot esculenta HOM05D004943 ORTHO05D005953 1.2e-54 217.2 139 75.5
vmacro09630 Vaccinium macrocarpon HOM05D004943 ORTHO05D005953 1.2e-54 217.2 148 72.3
Cfa016921 Carpinus fangiana HOM05D004943 ORTHO05D005953 1.6e-54 216.9 137 75.2
Dinv32219 Davidia involucrata HOM05D004943 ORTHO05D005953 1.6e-54 216.9 138 75.4
Lj1C893G4 Lonicera japonica HOM05D004943 ORTHO05D005953 1.6e-54 216.9 137 75.2
Actinidia35413 Actinidia chinensis HOM05D004943 ORTHO05D005953 2.1e-54 216.5 146 74.0
Haze_09852 Corylus avellana HOM05D004943 ORTHO05D005953 2.1e-54 216.5 137 75.2
Prupe.6G026500 Prunus persica HOM05D004943 ORTHO05D005953 2.7e-54 216.1 137 76.6
GSVIVG01014728001 Vitis vinifera HOM05D004943 ORTHO05D005953 6.0e-54 214.9 150 69.3
Actinidia37138 Actinidia chinensis HOM05D004943 ORTHO05D005953 7.9e-54 214.5 146 72.6
arahy.Tifrunner.gnm1.ann1.5RSY3J Arachis hypogaea HOM05D004943 ORTHO05D005953 7.9e-54 214.5 151 69.5
arahy.Tifrunner.gnm1.ann1.7JU3J0 Arachis hypogaea HOM05D004943 ORTHO05D005953 7.9e-54 214.5 151 69.5
CsaV3_4G029170 Cucumis sativus L. HOM05D004943 ORTHO05D005953 7.9e-54 214.5 137 75.2
RcHm_v2.0_Chr5g0076271 Rosa chinensis HOM05D004943 ORTHO05D005953 7.9e-54 214.5 137 74.5
Dinv21530 Davidia involucrata HOM05D004943 ORTHO05D005953 1.0e-53 214.2 138 73.2
FAN21G2115 Fragaria x ananassa HOM05D004943 ORTHO05D005953 1.0e-53 214.2 137 74.5
Nitab4.5_0007635g0010 Nicotiana tabacum HOM05D004943 ORTHO05D005953 1.0e-53 214.2 140 75.0
CSS0046003 Camellia sinensis var. sinensis HOM05D004943 ORTHO05D005953 1.8e-53 213.4 147 70.7
ClCG04G005970 Citrullus lanatus HOM05D004943 ORTHO05D005953 1.8e-53 213.4 137 74.5
MELO3C019145.2 Cucumis melo HOM05D004943 ORTHO05D005953 1.8e-53 213.4 137 74.5
Nitab4.5_0000366g0060 Nicotiana tabacum HOM05D004943 ORTHO05D005953 1.8e-53 213.4 140 75.0
RcHm_v2.0_Chr5g0076591 Rosa chinensis HOM05D004943 ORTHO05D005953 1.8e-53 213.4 137 73.7
PGSC0003DMG400024208 Solanum tuberosum HOM05D004943 ORTHO05D005953 3.0e-53 212.6 149 73.2
TAR375G0957 Trochodendron aralioides HOM05D004943 ORTHO05D005953 3.9e-53 212.2 146 68.5
CSS0011268 Camellia sinensis var. sinensis HOM05D004943 ORTHO05D005953 5.1e-53 211.8 138 73.9
Solyc07g009160.3 Solanum lycopersicum HOM05D004943 ORTHO05D005953 5.1e-53 211.8 149 72.5
Cc05_g15200 Coffea canephora HOM05D004943 ORTHO05D005953 1.5e-52 210.3 137 75.9
AUR62022831 Chenopodium quinoa HOM05D004943 ORTHO05D005953 1.9e-52 209.9 151 69.5
EL10Ac2g04777 Beta vulgaris HOM05D004943 ORTHO05D005953 2.5e-52 209.5 151 66.9
AUR62012198 Chenopodium quinoa HOM05D004943 ORTHO05D005953 4.3e-52 208.8 151 68.9
Oeu046942.1 Olea europaea HOM05D004943 ORTHO05D005953 5.6e-52 208.4 146 69.2
CAN.G160.52 Capsicum annuum HOM05D004943 ORTHO05D005953 9.6e-52 207.6 138 74.6
Sopen07g017150 Solanum pennellii HOM05D004943 ORTHO05D005953 9.6e-52 207.6 149 71.1
Peaxi162Scf00324g00322 Petunia axillaris HOM05D004943 ORTHO05D005953 1.3e-51 207.2 152 69.1
Sed0027327 Sechium edule HOM05D004943 ORTHO05D005953 2.1e-51 206.5 139 71.9
Lj3g0015751 Lotus japonicus HOM05D004943 ORTHO05D005953 3.7e-51 205.7 148 65.5
PGR083G1222 Punica granatum HOM05D004943 ORTHO05D005953 1.1e-50 204.1 135 74.8
MSTRG.15804 Avicennia marina HOM05D004943 ORTHO05D005953 1.8e-50 203.4 151 68.2
HanXRQChr04g0114541 Helianthus annuus HOM05D004943 ORTHO05D005953 1.8e-50 203.4 150 68.7
Phvul.008G280500 Phaseolus vulgaris HOM05D004943 ORTHO05D005953 1.8e-50 203.4 139 69.1
VMungo0647G1317 Vigna mungo HOM05D004943 ORTHO05D005953 1.8e-50 203.4 139 69.1
Glyma.02G301900 Glycine max HOM05D004943 ORTHO05D005953 2.4e-50 203.0 139 70.5
LjContig00081g0027973 Lotus japonicus HOM05D004943 ORTHO05D005953 2.4e-50 203.0 148 66.2
Actinidia04992 Actinidia chinensis HOM05D004943 ORTHO05D005953 3.1e-50 202.6 144 69.4
Migut.H01743 Erythranthe guttata HOM05D004943 ORTHO05D005953 4.0e-50 202.2 149 65.8
Medtr5g096260 Medicago truncatula HOM05D004943 ORTHO05D005953 4.0e-50 202.2 148 66.2
PSO541G3156 Papaver somniferum HOM05D004943 ORTHO05D005953 4.0e-50 202.2 148 63.5
SGA_v2.0_scaffold42G15954 Striga asiatica HOM05D004943 ORTHO05D005953 4.0e-50 202.2 150 67.3
PSO675G6228 Papaver somniferum HOM05D004943 ORTHO05D005953 5.3e-50 201.8 148 63.5
MD01G1008800 Malus domestica HOM05D004943 ORTHO05D005953 6.9e-50 201.4 137 69.3
Lsat_1_v5_gn_5_190221 Lactuca sativa HOM05D004943 ORTHO05D005953 9.0e-50 201.1 153 65.4
Ca_06409_v3 Cicer arietinum L. HOM05D004943 ORTHO05D005953 1.2e-49 200.7 148 66.2
Sopen10g001750 Solanum pennellii HOM05D004943 ORTHO05D005953 1.2e-49 200.7 134 73.9
PGSC0003DMG400008685 Solanum tuberosum HOM05D004943 ORTHO05D005953 1.2e-49 200.7 134 73.9
Oeu039419.1 Olea europaea HOM05D004943 ORTHO05D005953 1.5e-49 200.3 142 71.8
Solyc10g005780.3 Solanum lycopersicum HOM05D004943 ORTHO05D005953 1.5e-49 200.3 134 74.6
ECA236G2729 Erigeron canadensis HOM05D004943 ORTHO05D005953 3.4e-49 199.1 148 70.3
Aqoxy1G01190 Aquilegia oxysepala HOM05D004943 ORTHO05D005953 4.5e-49 198.7 137 67.2
HanXRQChr11g0334381 Helianthus annuus HOM05D004943 ORTHO05D005953 5.8e-49 198.4 147 68.0
Nn3g19397 Nelumbo nucifera HOM05D004943 ORTHO05D005953 5.8e-49 198.4 146 64.4
FAN16G1336 Fragaria x ananassa HOM05D004943 ORTHO05D005953 7.6e-49 198.0 147 69.4
Glyma.14G012300 Glycine max HOM05D004943 ORTHO05D005953 1.3e-48 197.2 139 67.6
Psat2g006640 Pisum sativum HOM05D004943 ORTHO05D005953 4.9e-48 195.3 148 63.5
MBI12_g14493_MAGBIO Magnolia biondii HOM05D004943 ORTHO05D005953 1.4e-47 193.7 150 61.3
unitig_746.g26710 Utricularia gibba HOM05D004943 ORTHO05D005953 1.9e-47 193.4 167 61.1
MSTRG.7011 Avicennia marina HOM05D004943 ORTHO05D005953 2.5e-47 193.0 137 70.1
Lalb_Chr13g0300511 Lupinus albus HOM05D004943 ORTHO05D005953 3.2e-47 192.6 136 66.2
TPR.G36515 Trifolium pratense HOM05D004943 ORTHO05D005953 4.2e-47 192.2 148 64.9
Ah.16g103050 Amaranthus hybridus HOM05D000612 ORTHO05D000461 5.5e-47 191.8 149 62.4
Lalb_Chr07g0180111 Lupinus albus HOM05D004943 ORTHO05D005953 1.2e-46 190.7 136 66.2
TAR374G0816 Trochodendron aralioides HOM05D004943 ORTHO05D005953 3.9e-45 185.7 147 65.3
Rhsim04G0011100 Rhododendron simsii HOM05D004943 ORTHO05D005953 5.1e-45 185.3 146 63.7
Sc13g0002830 Simmondsia chinensis HOM05D004943 ORTHO05D005953 1.1e-44 184.1 140 67.1
HPP92_001543 Vanilla planifolia HOM05D004943 ORTHO05D005953 2.5e-44 183.0 139 61.9
ATR0680G115 Amborella trichopoda HOM05D004943 ORTHO05D005953 8.2e-43 177.9 160 54.4
Ah.10g036690 Amaranthus hybridus HOM05D000612 ORTHO05D000461 1.8e-42 176.8 128 67.2
SEGI_32834 Sequoiadendron giganteum HOM05D004943 ORTHO05D005953 4.1e-42 175.6 135 65.2
Os04g0270200 Oryza sativa ssp. japonica HOM05D004943 ORTHO05D005953 3.9e-37 159.1 181 49.2
Zm00001eb086910 Zea mays HOM05D004943 ORTHO05D005953 2.5e-36 156.4 182 48.9
Mapoly0118s0025 Marchantia polymorpha HOM05D004943 ORTHO05D005953 4.3e-36 155.6 146 53.4
Pp3c17_17770 Physcomitrium patens HOM05D004943 ORTHO05D005953 1.1e-34 151.0 158 49.4
MBI12_g46257_MAGBIO Magnolia biondii HOM05D004943 ORTHO05D005953 1.0e-32 144.4 106 61.3
SMO367G0477 Selaginella moellendorffii HOM05D004943 ORTHO05D005953 1.9e-31 140.2 137 51.1
AagrBONN_evm.TU.Sc2ySwM_117.1155 Anthoceros agrestis HOM05D004943 ORTHO05D005953 6.1e-30 135.2 149 48.3
CBR_g45852 Chara braunii HOM05D004943 ORTHO05D005953 9.1e-26 121.3 125 47.2
Nn1g00202 Nelumbo nucifera HOM05D004943 ORTHO05D005953 5.0e-24 115.5 77 63.6
DCAR_013248 Daucus carota HOM05D004943 ORTHO05D005953 3.2e-23 112.8 137 47.4
Actinidia30384 Actinidia chinensis HOM05D004943 ORTHO05D005953 6.7e-21 105.1 68 69.1
TPR.G20059 Trifolium pratense HOM05D004943 ORTHO05D005953 2.6e-20 103.2 69 69.6
PRCOL_00005958 Prasinoderma coloniale HOM05D004943 ORTHO05D005953 4.4e-20 102.4 124 48.4
Rhsim04G0226000 Rhododendron simsii HOM05D004943 ORTHO05D005953 2.8e-19 99.8 67 73.1
Atru.chr3.1978 Acer truncatum HOM05D004943 ORTHO05D005953 2.4e-18 96.7 68 66.2
AT5G51620 Arabidopsis thaliana HOM05D004943 ORTHO05D005953 7.0e-18 95.1 51 84.3
Atru.chr2.3756 Acer truncatum HOM05D004943 ORTHO05D005953 4.5e-17 92.4 50 80.0
Cre05.g240550 Chlamydomonas reinhardtii HOM05D004943 ORTHO05D005953 3.2e-15 86.3 132 34.8
MCO09G115 Micromonas commoda HOM05D004943 ORTHO05D005953 7.2e-15 85.1 138 37.0
Rhsim13G0193400 Rhododendron simsii HOM05D004943 ORTHO05D005953 2.2e-11 73.6 48 72.9
Rhsim13G0193700 Rhododendron simsii HOM05D004943 ORTHO05D005953 2.2e-11 73.6 48 72.9
Oeu005474.1 Olea europaea HOM05D004943 ORTHO05D288151 3.7e-11 72.8 75 56.0
Nitab4.5_0005478g0050 Nicotiana tabacum HOM05D004943 ORTHO05D005953 9.1e-10 68.2 117 42.7
Rhsim13G0193100 Rhododendron simsii HOM05D004943 ORTHO05D005953 3.5e-09 66.2 40 77.5
Pp3c14_20520 Physcomitrium patens HOM05D004943 ORTHO05D005953 2.2e-08 63.5 101 37.6
Carub.0005s1381 Capsella rubella HOM05D003949 ORTHO05D004504 1.1e-07 61.2 42 59.5


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