Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 2.9e-146 521.9 272 100.0
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 8.6e-50 201.4 274 48.9
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 3.3e-49 199.5 282 46.5
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 5.6e-49 198.7 277 48.7
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.6e-48 197.2 270 48.9
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 4.7e-48 195.7 270 47.4
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 6.2e-48 195.3 270 48.5
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 2.6e-46 189.9 287 46.3
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 9.8e-46 188.0 283 47.0
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 2.7e-43 179.9 282 45.4
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.0e-42 177.9 272 44.9
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 3.9e-42 176.0 281 46.3
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 6.6e-42 175.3 279 42.3
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 9.5e-41 171.4 271 44.6
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 1.2e-40 171.0 282 43.6
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 1.1e-39 167.9 274 43.8
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 4.0e-39 166.0 273 44.0
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 5.2e-39 165.6 284 43.7
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 1.5e-38 164.1 272 40.8
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 2.0e-38 163.7 276 44.6
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.0e-38 163.7 279 40.9
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 2.6e-38 163.3 284 41.5
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 4.4e-38 162.5 311 43.1
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 4.4e-38 162.5 276 44.6
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 1.3e-37 161.0 279 40.1
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 1.9e-36 157.1 263 43.7
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 4.1e-36 156.0 284 39.4
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 5.4e-36 155.6 291 42.6
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 5.4e-36 155.6 279 40.1
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 2.7e-35 153.3 279 39.4
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 4.6e-35 152.5 273 42.5
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 3.9e-34 149.4 293 38.6
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 2.5e-33 146.7 289 38.1
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 5.6e-33 145.6 281 39.1
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 5.6e-33 145.6 281 42.0
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 7.3e-33 145.2 281 41.3
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 7.3e-33 145.2 290 41.0
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.8e-31 140.6 294 38.1
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 2.4e-31 140.2 265 40.4
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 6.9e-31 138.7 281 41.6
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 6.9e-31 138.7 273 39.2
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.5e-30 137.5 274 38.7
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 1.5e-30 137.5 277 38.3
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 2.6e-30 136.7 276 39.1
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 7.6e-30 135.2 273 38.5
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 1.7e-29 134.0 273 37.4
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 1.7e-29 134.0 273 37.4
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 1.7e-29 134.0 267 39.7
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 1.7e-29 134.0 266 42.5
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 2.2e-29 133.7 262 39.7
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 1.9e-28 130.6 261 38.3
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 7.1e-28 128.6 257 39.3
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.1e-27 127.1 246 43.1
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 3.5e-27 126.3 298 38.6
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 4.6e-27 125.9 271 39.1
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 6.0e-27 125.6 265 38.9
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 5.1e-26 122.5 287 37.3
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 6.6e-26 122.1 240 40.4
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 1.1e-25 121.3 276 37.0
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 1.9e-25 120.6 298 38.6
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 1.9e-25 120.6 258 40.7
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 2.5e-25 120.2 298 38.3
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 3.3e-25 119.8 287 38.7
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 3.3e-25 119.8 270 38.9
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 4.3e-25 119.4 319 33.2
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 5.6e-25 119.0 292 37.0
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 5.6e-25 119.0 317 33.4
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 7.3e-25 118.6 237 39.7
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 2.1e-24 117.1 236 42.4
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 3.6e-24 116.3 316 32.9
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.6e-24 116.3 316 32.9
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.6e-24 116.3 283 36.0
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 4.8e-24 115.9 205 43.9
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 6.2e-24 115.5 233 39.5
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 8.1e-24 115.2 293 36.2
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 8.1e-24 115.2 293 36.2
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 8.1e-24 115.2 188 45.7
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 2.4e-23 113.6 242 40.1
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 3.1e-23 113.2 191 42.4
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 4.0e-23 112.8 292 36.0
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 4.0e-23 112.8 292 36.0
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 6.9e-23 112.1 210 42.4
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 2.6e-22 110.2 310 33.5
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 2.6e-22 110.2 289 36.7
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 3.4e-22 109.8 239 40.2
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 5.8e-22 109.0 296 36.8
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 7.6e-22 108.6 222 37.4
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 2.9e-21 106.7 267 36.0
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 3.8e-21 106.3 221 39.4
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 8.4e-21 105.1 276 36.2
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 2.1e-19 100.5 128 49.2
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 4.6e-19 99.4 196 40.3
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 1.3e-18 97.8 238 35.3
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 1.3e-18 97.8 238 35.3
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 1.1e-17 94.7 196 36.2
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 3.3e-17 93.2 186 39.8
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 3.3e-17 93.2 186 39.8
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 2.1e-16 90.5 329 30.1
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 9.9e-14 81.6 189 36.0
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 3.2e-12 76.6 190 31.6
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 1.4e-07 61.2 117 37.6
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 7.6e-06 55.5 56 50.0
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 7.6e-06 55.5 56 50.0
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 7.6e-06 55.5 56 50.0


User provided reference genes

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