Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc117.56 Carica papaya HOM05D004408 ORTHO05D005486 9.0e-268 926.4 481 100.0
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 1.1e-76 291.6 417 48.4
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 5.6e-76 289.3 426 46.9
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 9.5e-76 288.5 435 46.2
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 9.5e-76 288.5 435 46.2
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 1.4e-74 284.6 476 44.3
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 1.8e-74 284.3 470 44.0
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 3.0e-74 283.5 417 47.0
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 4.0e-74 283.1 417 47.0
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.5e-73 281.2 365 50.4
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 2.6e-73 280.4 417 46.3
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 3.4e-73 280.0 421 47.3
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 9.8e-73 278.5 417 46.3
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 9.8e-73 278.5 464 43.3
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 9.8e-73 278.5 417 46.0
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 1.3e-72 278.1 426 45.5
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 1.3e-72 278.1 416 46.4
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 1.7e-72 277.7 464 43.3
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 1.7e-72 277.7 417 46.3
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 2.2e-72 277.3 417 45.3
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 2.9e-72 276.9 416 45.9
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 3.7e-72 276.6 417 46.5
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 1.1e-71 275.0 421 43.7
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 1.1e-71 275.0 420 46.0
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 1.1e-71 275.0 417 45.8
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 1.1e-71 275.0 408 46.8
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 1.8e-71 274.2 417 45.6
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 1.8e-71 274.2 463 43.0
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 4.1e-71 273.1 416 45.9
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 4.1e-71 273.1 425 45.2
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 5.4e-71 272.7 464 43.5
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 7.0e-71 272.3 417 45.3
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 1.0e-69 268.5 417 44.4
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 1.0e-69 268.5 417 44.6
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 1.0e-69 268.5 416 45.7
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 1.7e-69 267.7 417 44.8
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 3.9e-69 266.5 476 41.8
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 6.6e-69 265.8 425 45.4
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 6.6e-69 265.8 426 43.2
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 1.5e-68 264.6 426 43.2
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 1.9e-68 264.2 398 45.7
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.3e-68 263.1 425 44.9
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.3e-68 263.1 425 44.9
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.2e-67 261.5 417 44.1
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 2.8e-67 260.4 429 44.3
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 3.6e-67 260.0 416 44.7
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 1.0e-66 258.5 416 43.8
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 1.8e-66 257.7 464 41.8
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 2.3e-66 257.3 415 43.9
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 3.1e-66 256.9 415 43.9
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 4.0e-66 256.5 462 42.4
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 5.2e-66 256.1 416 43.3
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 5.2e-66 256.1 416 43.3
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 8.9e-66 255.4 464 41.4
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 1.2e-65 255.0 464 42.2
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.5e-65 254.6 425 44.0
Nitab4.5_0000921g0020 Nicotiana tabacum HOM05D004408 ORTHO05D005486 2.0e-65 254.2 414 44.4
Peaxi162Scf01827g00009 Petunia axillaris HOM05D004408 ORTHO05D005486 1.3e-64 251.5 414 43.5
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 2.2e-64 250.8 460 42.0
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 3.7e-64 250.0 417 43.6
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 4.9e-64 249.6 416 43.5
Solyc09g018340.2 Solanum lycopersicum HOM05D004408 ORTHO05D005486 4.9e-64 249.6 417 43.9
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 4.9e-64 249.6 417 43.9
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 4.9e-64 249.6 412 43.2
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 6.4e-64 249.2 417 44.1
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 1.4e-63 248.1 415 43.4
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 1.9e-63 247.7 416 43.0
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 1.9e-63 247.7 416 43.3
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 1.9e-63 247.7 416 43.3
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 5.4e-63 246.1 415 42.7
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 7.0e-63 245.7 416 43.0
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 1.2e-62 245.0 415 43.1
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 3.5e-62 243.4 415 42.9
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 6.0e-62 242.7 419 42.5
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 3.0e-61 240.4 437 42.1
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 1.1e-60 238.4 396 43.7
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 1.9e-60 237.7 436 41.5
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 1.9e-60 237.7 396 40.9
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 9.5e-60 235.3 506 37.7
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 3.1e-58 230.3 438 40.6
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 3.1e-58 230.3 438 40.6
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 8.9e-58 228.8 427 41.0
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 2.2e-56 224.2 417 41.2
arahy.Tifrunner.gnm1.ann1.6Q424B Arachis hypogaea HOM05D004408 ORTHO05D005486 9.2e-55 218.8 325 47.1
Psat6g147640 Pisum sativum HOM05D004408 ORTHO05D005486 9.2e-55 218.8 238 55.5
Atru.chr2.667 Acer truncatum HOM05D004408 ORTHO05D005486 4.7e-51 206.5 227 55.9
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 4.7e-51 206.5 379 42.5
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 6.8e-50 202.6 431 37.4
Nitab4.5_0000162g0020 Nicotiana tabacum HOM05D004408 ORTHO05D005486 7.6e-49 199.1 324 44.1
Zm00001eb151860 Zea mays HOM05D004408 ORTHO05D005486 2.2e-48 197.6 238 52.1
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 1.9e-47 194.5 418 34.7
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 1.6e-46 191.4 365 41.9
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 1.0e-45 188.7 438 34.2
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 3.0e-45 187.2 360 39.7
SMO169G0216 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 3.9e-45 186.8 410 32.7
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 8.6e-45 185.7 360 39.7
CDE10G0751 Ceratophyllum demersum HOM05D004408 ORTHO05D005486 6.2e-43 179.5 370 38.4
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 4.0e-42 176.8 300 43.3
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 2.6e-41 174.1 293 42.7
SEGI_03716 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 3.8e-40 170.2 207 51.7
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 6.4e-40 169.5 418 31.1
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 2.4e-39 167.5 121 76.9
vmacro19680 Vaccinium macrocarpon HOM05D004408 ORTHO05D005486 3.5e-38 163.7 254 44.9
CBR_g23067 Chara braunii HOM05D004408 ORTHO05D005486 2.1e-35 154.5 419 32.0
Pp3c17_790 Physcomitrium patens HOM05D004408 ORTHO05D005486 2.4e-31 141.0 431 29.7
Actinidia17457 Actinidia chinensis HOM05D004408 ORTHO05D005486 2.9e-24 117.5 172 45.3
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 3.3e-20 104.0 211 37.0
Oeu060841.3 Olea europaea HOM05D004408 ORTHO05D005486 5.3e-18 96.7 211 36.0
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 2.9e-16 90.9 128 47.7
SMO116G0400 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 3.3e-12 77.4 178 29.8
arahy.Tifrunner.gnm1.ann1.QABH9B Arachis hypogaea HOM05D004408 ORTHO05D005486 9.0e-10 69.3 46 73.9
Psat6g147800 Pisum sativum HOM05D004408 ORTHO05D005486 2.0e-09 68.2 93 47.3
SEGI_11157 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 2.6e-09 67.8 54 63.0
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 4.5e-09 67.0 55 60.0
Gohir.D11G265950 Gossypium hirsutum HOM05D004408 ORTHO05D005486 2.2e-08 64.7 36 91.7
MBI05_g21273_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 6.5e-08 63.2 35 91.4
Nitab4.5_0000162g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 1.1e-07 62.4 46 69.6


User provided reference genes

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