Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc117.14 Carica papaya HOM05D001419 ORTHO05D001376 6.5e-80 300.8 169 100.0
Carub.0003s0424 Capsella rubella HOM05D001419 ORTHO05D001376 9.8e-28 127.5 159 50.3
AT4G08630 Arabidopsis thaliana HOM05D001419 ORTHO05D001376 1.3e-27 127.1 159 49.1
CARHR079320 Cardamine hirsuta HOM05D001419 ORTHO05D001376 1.3e-24 117.1 159 53.5
Sp3g03830 Schrenkiella parvula HOM05D001419 ORTHO05D001376 6.6e-24 114.8 159 54.1
THA.LOC104802815 Tarenaya hassleriana HOM05D001419 ORTHO05D001376 8.6e-24 114.4 159 54.1
Aa31LG5G15430 Aethionema arabicum HOM05D001419 ORTHO05D001376 1.1e-23 114.0 138 52.9
THA.LOC104818662 Tarenaya hassleriana HOM05D001419 ORTHO05D001376 1.5e-23 113.6 168 45.8
AL3G15370 Arabidopsis lyrata HOM05D001419 ORTHO05D001376 2.5e-23 112.8 159 53.5
Thhalv10020103m.g Eutrema salsugineum HOM05D001419 ORTHO05D001376 1.6e-22 110.2 162 50.6
BcaC05g29984 Brassica carinata HOM05D001276 ORTHO05D001085 9.8e-20 100.9 159 49.1
A05p42580 Brassica napus HOM05D001419 ORTHO05D001376 1.7e-19 100.1 158 48.7
BolC5t34881H Brassica oleracea HOM05D001419 ORTHO05D001376 1.7e-19 100.1 158 48.7
BraA05t22995Z Brassica rapa HOM05D001419 ORTHO05D001376 1.7e-19 100.1 158 48.7
Prupe.6G335100 Prunus persica HOM05D001419 ORTHO05D001376 1.7e-19 100.1 128 51.6
BcaC05g29982 Brassica carinata HOM05D001419 ORTHO05D001376 2.2e-19 99.8 158 48.7
Haze_04287 Corylus avellana HOM05D001419 ORTHO05D001376 2.9e-19 99.4 112 55.4
C05p62260 Brassica napus HOM05D001419 ORTHO05D001376 3.7e-19 99.0 158 48.1
Cfa006501 Carpinus fangiana HOM05D001419 ORTHO05D001376 4.9e-19 98.6 112 55.4
Sabra05G0041300 Salix brachista HOM05D001419 ORTHO05D001376 1.9e-18 96.7 106 52.8
TAR633G1372 Trochodendron aralioides HOM05D001419 ORTHO05D001376 2.4e-18 96.3 118 53.4
Potri.005G044600 Populus trichocarpa HOM05D001419 ORTHO05D001376 7.0e-18 94.7 109 50.5
QL03p000945 Quercus lobata HOM05D001419 ORTHO05D001376 7.0e-18 94.7 106 54.7
Manes.08G125500 Manihot esculenta HOM05D001419 ORTHO05D001376 9.2e-18 94.4 164 43.3
PGR004G1853 Punica granatum HOM05D001419 ORTHO05D001376 3.5e-17 92.4 108 53.7
CANSAT54G1295 Cannabis sativa HOM05D001419 ORTHO05D001376 1.0e-16 90.9 171 42.1
Thecc.05G252400 Theobroma cacao HOM05D001419 ORTHO05D001376 3.9e-16 89.0 160 43.1
Ca_09389_v3 Cicer arietinum L. HOM05D001419 ORTHO05D001376 1.9e-15 86.7 117 49.6
Potri.013G031151 Populus trichocarpa HOM05D001419 ORTHO05D001376 9.5e-15 84.3 101 47.5
ClCG02G016250 Citrullus lanatus HOM05D001419 ORTHO05D001376 1.2e-14 84.0 121 48.8
Cc02_g32270 Coffea canephora HOM05D001419 ORTHO05D001376 1.2e-14 84.0 108 51.9
MD00G1051700 Malus domestica HOM05D001419 ORTHO05D001376 1.2e-14 84.0 119 52.1
CsaV3_2G004520 Cucumis sativus L. HOM05D001419 ORTHO05D001376 2.1e-14 83.2 110 54.5
Duzib177G0379 Durio zibethinus HOM05D001419 ORTHO05D001376 2.1e-14 83.2 108 51.9
Lj9A675T37 Lonicera japonica HOM05D001419 ORTHO05D001376 2.1e-14 83.2 106 50.0
Duzib177G0661 Durio zibethinus HOM05D001419 ORTHO05D001376 2.8e-14 82.8 118 50.0
Medtr7g114220 Medicago truncatula HOM05D001419 ORTHO05D001376 3.6e-14 82.4 112 48.2
Psat3g009000 Pisum sativum HOM05D001419 ORTHO05D001376 3.6e-14 82.4 111 47.7
MD12G1231500 Malus domestica HOM05D001419 ORTHO05D001376 4.7e-14 82.0 107 53.3
RcHm_v2.0_Chr3g0452891 Rosa chinensis HOM05D001419 ORTHO05D001376 1.1e-13 80.9 110 53.6
Atru.chr2.630 Acer truncatum HOM05D001419 ORTHO05D001376 4.0e-13 79.0 154 51.3
MELO3C004339.2 Cucumis melo HOM05D001419 ORTHO05D001376 6.8e-13 78.2 119 48.7
Sed0012428 Sechium edule HOM05D001419 ORTHO05D001376 6.8e-13 78.2 114 50.9
Dinv27608 Davidia involucrata HOM05D001419 ORTHO05D001376 8.9e-13 77.8 115 48.7
Eucgr.H04424 Eucalyptus grandis HOM05D001419 ORTHO05D001376 1.2e-12 77.4 106 50.0
FAN09G2239 Fragaria x ananassa HOM05D001419 ORTHO05D001376 2.6e-12 76.3 162 35.2
CiPaw.07G011100 Carya illinoinensis HOM05D001419 ORTHO05D001376 3.4e-12 75.9 109 47.7
Sed0016461 Sechium edule HOM05D001419 ORTHO05D001376 4.4e-12 75.5 115 49.6
COL.COLO4_36052 Corchorus olitorius HOM05D001419 ORTHO05D001376 1.7e-11 73.6 84 58.3
Oeu001298.2 Olea europaea HOM05D001419 ORTHO05D001376 2.2e-11 73.2 94 48.9
FAN09G0147 Fragaria x ananassa HOM05D001419 ORTHO05D001376 6.4e-11 71.6 163 36.2
Nn3g21279 Nelumbo nucifera HOM05D001419 ORTHO05D001376 6.4e-11 71.6 182 36.3
CSS0002764 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 9.2e-10 67.8 121 46.3
SalBow8G0433 Salvia bowleyana HOM05D001419 ORTHO05D001376 9.2e-10 67.8 78 52.6
SalBow8G5217 Salvia bowleyana HOM05D001419 ORTHO05D001376 9.2e-10 67.8 78 52.6
Migut.M00653 Erythranthe guttata HOM05D001419 ORTHO05D001376 2.1e-09 66.6 78 55.1
VMungo0540G0088 Vigna mungo HOM05D001419 ORTHO05D001376 3.5e-09 65.9 113 46.9
EL10Ac4g09245 Beta vulgaris HOM05D001419 ORTHO05D000001 4.6e-09 65.5 145 37.2
PSO541G2430 Papaver somniferum HOM05D001419 ORTHO05D001376 6.0e-09 65.1 111 43.2
Phvul.006G096800 Phaseolus vulgaris HOM05D001419 ORTHO05D001376 7.8e-09 64.7 113 46.9
Lalb_Chr18g0045311 Lupinus albus HOM05D001419 ORTHO05D001376 1.3e-08 63.9 112 42.0
Aqoxy5G00629 Aquilegia oxysepala HOM05D001419 ORTHO05D001376 3.9e-08 62.4 113 45.1
FAN02G2118 Fragaria x ananassa HOM05D001419 ORTHO05D001376 3.9e-08 62.4 122 36.9
ATR0706G100 Amborella trichopoda HOM05D001419 ORTHO05D001376 6.6e-08 61.6 114 41.2
FvH4_6g04230 Fragaria vesca HOM05D001419 ORTHO05D001376 6.6e-08 61.6 122 36.9
FAN05G3489 Fragaria x ananassa HOM05D001419 ORTHO05D001376 2.5e-07 59.7 122 36.1
FAN14G0260 Fragaria x ananassa HOM05D001419 ORTHO05D001376 4.3e-07 58.9 122 36.1
Gohir.D11G247500 Gossypium hirsutum HOM05D001419 ORTHO05D001376 4.3e-07 58.9 80 52.5
Gorai.007G263800 Gossypium raimondii HOM05D001419 ORTHO05D001376 4.3e-07 58.9 80 52.5
Oeu058429.1 Olea europaea HOM05D031317 ORTHO05D022512 1.2e-06 57.4 61 55.7
FAN05G2203 Fragaria x ananassa HOM05D001419 ORTHO05D001376 2.8e-06 56.2 122 34.4
Gohir.A11G237000 Gossypium hirsutum HOM05D001419 ORTHO05D001376 4.7e-06 55.5 73 54.8
Peaxi162Scf00410g00019 Petunia axillaris HOM05D001419 ORTHO05D001376 6.2e-06 55.1 74 50.0


User provided reference genes

Program Settings