Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 8.1e-169 597.0 314 100.0
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 1.8e-120 436.4 318 77.4
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 5.9e-119 431.4 331 75.8
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 6.5e-118 427.9 316 73.4
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 6.5e-118 427.9 316 73.4
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 9.4e-117 424.1 326 70.9
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 4.0e-115 418.7 326 71.2
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 8.8e-115 417.5 334 72.8
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 3.4e-114 415.6 314 72.0
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 1.1e-112 410.6 324 73.5
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 1.8e-112 409.8 281 76.2
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 3.1e-112 409.1 324 73.1
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 4.1e-112 408.7 321 70.7
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 5.4e-112 408.3 295 72.2
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 7.0e-112 407.9 327 73.1
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 7.7e-111 404.4 318 68.2
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 1.3e-110 403.7 315 70.5
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 1.7e-110 403.3 321 72.9
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 1.9e-109 399.8 273 75.1
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 3.2e-109 399.1 319 68.0
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 4.2e-109 398.7 278 74.1
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 5.5e-109 398.3 314 70.4
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 5.5e-109 398.3 274 78.8
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 5.5e-109 398.3 330 72.1
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 7.2e-109 397.9 320 67.8
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 9.4e-109 397.5 268 75.7
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 1.2e-108 397.1 322 72.4
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 1.6e-108 396.7 269 79.2
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 2.1e-108 396.4 299 71.9
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 3.6e-108 395.6 320 68.8
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 3.6e-108 395.6 291 73.2
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 3.6e-108 395.6 268 75.4
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 8.0e-108 394.4 269 75.8
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 8.0e-108 394.4 265 76.2
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 8.0e-108 394.4 271 73.8
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 1.8e-107 393.3 272 76.1
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 3.0e-107 392.5 266 75.2
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 4.0e-107 392.1 321 69.2
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 4.0e-107 392.1 324 71.6
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 5.2e-107 391.7 314 69.7
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 1.2e-106 390.6 268 74.6
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 3.4e-106 389.0 262 77.1
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 3.4e-106 389.0 318 68.9
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 4.4e-106 388.7 323 70.0
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 7.5e-106 387.9 269 78.8
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 7.5e-106 387.9 269 78.8
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 7.5e-106 387.9 314 67.5
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 9.8e-106 387.5 271 77.1
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 1.7e-105 386.7 271 74.9
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 2.2e-105 386.3 268 76.5
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 2.8e-105 386.0 322 70.8
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 6.3e-105 384.8 268 73.9
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 6.3e-105 384.8 267 74.9
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 8.3e-105 384.4 260 76.5
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 8.3e-105 384.4 321 70.1
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 1.8e-104 383.3 278 75.2
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 4.1e-104 382.1 315 71.1
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 5.4e-104 381.7 324 64.2
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 7.0e-104 381.3 270 71.9
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 1.6e-103 380.2 265 79.6
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 5.9e-103 378.3 235 84.3
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 7.7e-103 377.9 316 64.6
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.0e-102 377.5 315 67.3
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 1.0e-102 377.5 267 74.2
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 1.3e-102 377.1 245 77.1
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 2.9e-102 375.9 265 75.1
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 6.6e-102 374.8 265 74.3
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 8.6e-102 374.4 234 80.3
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.9e-101 373.2 315 69.5
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 2.5e-101 372.9 313 64.9
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 2.5e-101 372.9 320 63.4
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 5.6e-101 371.7 269 72.5
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 1.2e-100 370.5 324 63.3
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 1.6e-100 370.2 278 73.4
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 2.1e-100 369.8 325 63.4
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 2.1e-100 369.8 262 73.7
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 2.8e-100 369.4 265 71.3
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 1.8e-99 366.7 269 71.4
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 3.0e-99 365.9 268 71.3
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 6.8e-99 364.8 317 63.1
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 8.9e-99 364.4 274 74.1
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.0e-98 363.2 263 77.6
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 3.4e-98 362.5 319 62.7
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 7.5e-98 361.3 319 62.1
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 7.5e-98 361.3 267 73.4
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 2.2e-97 359.8 319 62.1
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 4.9e-97 358.6 289 69.9
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 2.4e-96 356.3 318 61.9
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 3.2e-96 355.9 324 62.0
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 5.4e-96 355.1 320 63.8
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 1.3e-94 350.5 267 70.0
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 3.0e-94 349.4 235 80.4
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 1.6e-92 343.6 253 75.1
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 2.6e-90 336.3 289 64.7
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 1.7e-89 333.6 331 59.2
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 2.4e-88 329.7 272 66.9
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 9.2e-88 327.8 238 71.0
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 4.6e-87 325.5 213 77.9
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 1.2e-84 317.4 264 63.6
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 6.2e-84 315.1 269 63.2
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 8.9e-83 311.2 269 67.3
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.9e-78 295.8 234 68.4
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 4.0e-75 285.8 250 58.8
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 2.4e-72 276.6 270 59.3
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 1.3e-70 270.8 247 57.9
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 3.0e-70 269.6 183 77.6
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 2.8e-68 263.1 238 58.8
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 2.4e-67 260.0 170 76.5
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 4.4e-66 255.8 155 83.2
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 9.6e-61 238.0 197 60.9
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 2.6e-58 229.9 285 49.5
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 6.4e-57 225.3 233 58.4
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 8.7e-54 214.9 268 45.1
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 5.5e-40 169.1 178 56.2
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 2.1e-39 167.2 150 58.7
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.5e-37 160.2 264 47.3
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 2.6e-26 123.6 113 56.6
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 1.4e-24 117.9 81 79.0
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 2.1e-23 114.0 116 60.3
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 2.7e-23 113.6 90 72.2
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 2.3e-22 110.5 116 60.3
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 1.6e-10 71.2 66 59.1
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 5.9e-10 69.3 66 59.1
SMO343G0062 Selaginella moellendorffii HOM05D067698 ORTHO05D050854 6.7e-06 55.8 99 33.3


User provided reference genes

Program Settings