Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.4e-186 656.4 393 100.0
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 4.6e-44 183.0 123 73.2
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 4.6e-44 183.0 126 71.4
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 8.6e-43 178.7 123 73.2
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.5e-42 177.9 125 69.6
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.9e-42 177.6 126 70.6
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 2.1e-41 174.1 123 69.9
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 2.1e-41 174.1 123 69.9
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 2.1e-41 174.1 123 69.9
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.8e-41 173.7 124 72.6
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 8.1e-41 172.2 123 73.2
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 1.4e-40 171.4 125 70.4
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 2.4e-40 170.6 407 37.8
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 3.1e-40 170.2 174 55.7
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 4.0e-40 169.9 396 37.1
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 4.4e-39 166.4 285 42.1
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.3e-38 164.9 430 34.0
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 2.2e-38 164.1 132 65.2
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 2.9e-38 163.7 125 68.0
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 2.9e-38 163.7 125 68.0
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 1.4e-37 161.4 132 64.4
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 1.9e-37 161.0 161 57.1
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 1.9e-37 161.0 444 35.8
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 2.1e-36 157.5 389 41.9
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 3.5e-36 156.8 326 39.9
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 6.0e-36 156.0 121 66.9
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.0e-35 155.2 186 51.1
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 5.1e-35 152.9 129 63.6
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 6.6e-35 152.5 162 54.9
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 5.6e-34 149.4 175 50.3
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 5.6e-34 149.4 143 57.3
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 7.3e-34 149.1 352 40.3
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 9.6e-34 148.7 173 53.8
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.2e-33 148.3 334 39.5
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.1e-33 147.5 361 34.1
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 2.8e-33 147.1 307 40.7
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 1.1e-32 145.2 118 66.1
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 1.4e-32 144.8 105 70.5
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 1.8e-32 144.4 338 37.9
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.8e-32 144.4 183 51.4
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 4.0e-32 143.3 159 55.3
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 9.0e-32 142.1 265 40.8
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.2e-31 141.7 123 65.0
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 1.5e-31 141.4 140 55.0
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 1.5e-31 141.4 165 51.5
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 1.5e-31 141.4 187 48.1
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 2.6e-31 140.6 173 50.3
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 2.6e-31 140.6 163 50.9
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 2.6e-31 140.6 170 53.5
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 2.6e-31 140.6 402 35.6
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 4.4e-31 139.8 124 59.7
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 4.4e-31 139.8 174 50.6
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 5.8e-31 139.4 176 52.3
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 7.6e-31 139.0 173 53.8
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 7.6e-31 139.0 168 49.4
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 9.9e-31 138.7 186 48.9
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 9.9e-31 138.7 391 33.5
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.3e-30 138.3 106 68.9
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 1.3e-30 138.3 162 54.3
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.7e-30 137.9 162 53.7
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 1.7e-30 137.9 120 59.2
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 2.9e-30 137.1 119 65.5
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 2.9e-30 137.1 126 61.9
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 3.8e-30 136.7 159 51.6
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 8.4e-30 135.6 95 69.5
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 8.4e-30 135.6 80 82.5
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 1.4e-29 134.8 122 59.0
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 2.4e-29 134.0 332 44.0
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 3.2e-29 133.7 220 42.3
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 7.1e-29 132.5 134 54.5
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 9.3e-29 132.1 122 57.4
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 9.3e-29 132.1 401 31.7
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 9.3e-29 132.1 107 67.3
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 9.3e-29 132.1 133 53.4
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 1.2e-28 131.7 175 46.9
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 1.6e-28 131.3 99 69.7
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.6e-28 131.3 106 66.0
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 2.7e-28 130.6 80 80.0
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 3.5e-28 130.2 164 52.4
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 3.5e-28 130.2 163 50.3
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 4.6e-28 129.8 122 56.6
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 4.6e-28 129.8 300 40.0
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 4.6e-28 129.8 163 50.3
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 6.0e-28 129.4 283 35.3
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 6.0e-28 129.4 163 50.3
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 7.8e-28 129.0 176 45.5
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 1.0e-27 128.6 425 32.0
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.0e-27 128.6 418 38.0
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 1.7e-27 127.9 398 33.2
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 3.0e-27 127.1 386 33.7
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 3.9e-27 126.7 344 43.3
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 5.1e-27 126.3 453 31.8
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 8.7e-27 125.6 392 34.2
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 2.5e-26 124.0 304 36.8
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 9.6e-26 122.1 359 34.0
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 1.3e-25 121.7 343 37.0
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.3e-25 121.7 124 53.2
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.3e-25 121.7 124 53.2
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 2.1e-25 120.9 391 34.0
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 3.6e-25 120.2 294 34.4
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 6.2e-25 119.4 343 37.9
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 6.2e-25 119.4 161 47.2
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 8.1e-25 119.0 377 33.2
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.1e-24 118.6 180 46.1
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.4e-24 118.2 305 35.4
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 5.3e-24 116.3 392 30.9
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 9.0e-24 115.5 433 30.7
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 1.2e-23 115.2 398 33.2
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 2.6e-23 114.0 340 33.8
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 3.4e-23 113.6 359 32.0
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.3e-22 111.7 390 30.3
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.7e-22 111.3 158 44.3
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 2.2e-22 110.9 379 31.4
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.9e-22 109.8 94 66.0
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 6.4e-22 109.4 418 31.8
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.4e-21 107.5 138 49.3
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-20 104.8 81 64.2
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.1e-18 98.6 60 78.3
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 3.7e-17 93.6 239 41.0
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 9.3e-13 79.0 52 73.1
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 3.5e-12 77.0 170 37.6
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 2.3e-11 74.3 99 51.5
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 2.3e-11 74.3 497 25.4
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 3.0e-11 73.9 92 53.3
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.1e-08 65.5 76 47.4
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 1.1e-08 65.5 390 27.7
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 3.1e-08 63.9 35 80.0
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 3.1e-08 63.9 35 80.0
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 9.0e-08 62.4 149 37.6


User provided reference genes

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