Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 1.4e-126 456.4 251 100.0
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.1e-107 393.7 238 87.4
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 1.9e-107 392.9 238 86.6
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 2.1e-106 389.4 238 86.6
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 2.1e-106 389.4 238 87.0
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 4.6e-106 388.3 238 85.7
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 1.3e-105 386.7 237 85.7
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.3e-105 386.7 238 86.1
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.3e-105 386.7 238 85.7
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 3.9e-105 385.2 238 85.7
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 3.9e-105 385.2 238 85.7
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 5.1e-105 384.8 238 85.3
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 2.5e-104 382.5 238 84.5
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 3.3e-104 382.1 238 83.6
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 3.3e-104 382.1 238 84.0
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 7.3e-104 380.9 238 81.9
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 7.3e-104 380.9 238 84.5
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 9.6e-104 380.6 238 84.0
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.6e-103 379.8 238 83.2
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 2.1e-103 379.4 238 82.8
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.8e-103 379.0 238 85.7
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 2.8e-103 379.0 238 83.6
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.4e-102 376.7 251 80.9
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.8e-102 376.3 238 81.5
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.8e-102 376.3 237 83.5
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.4e-102 375.9 237 83.5
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 3.1e-102 375.6 238 81.9
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 4.0e-102 375.2 238 84.0
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.2e-102 374.8 238 81.5
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 5.2e-102 374.8 238 82.4
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 6.8e-102 374.4 238 82.8
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 6.8e-102 374.4 238 81.9
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 8.9e-102 374.0 238 84.0
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 8.9e-102 374.0 238 81.1
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 1.2e-101 373.6 237 82.3
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.2e-101 373.6 238 80.3
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.5e-101 373.2 238 81.5
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.5e-101 373.2 238 82.8
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 2.0e-101 372.9 238 82.4
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.4e-101 372.1 238 80.3
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 5.8e-101 371.3 237 81.4
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 5.8e-101 371.3 238 81.9
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 7.6e-101 370.9 248 79.4
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 7.6e-101 370.9 248 79.4
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 7.6e-101 370.9 237 81.9
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 9.9e-101 370.5 248 79.4
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 9.9e-101 370.5 248 79.4
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.3e-100 370.2 248 79.0
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 1.7e-100 369.8 238 81.1
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.7e-100 369.8 238 80.3
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 2.2e-100 369.4 237 81.0
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.9e-100 369.0 238 79.8
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.9e-100 369.0 238 81.9
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 3.8e-100 368.6 236 82.2
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 3.8e-100 368.6 237 81.4
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 1.1e-99 367.1 231 85.3
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 2.4e-99 365.9 238 81.9
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 4.2e-99 365.2 236 80.1
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 5.4e-99 364.8 237 79.7
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 5.4e-99 364.8 238 81.5
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 5.4e-99 364.8 238 81.5
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 5.4e-99 364.8 236 80.9
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 7.1e-99 364.4 233 83.3
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 7.1e-99 364.4 237 80.6
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 9.3e-99 364.0 237 79.3
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 9.3e-99 364.0 240 78.3
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 9.3e-99 364.0 236 81.8
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 1.6e-98 363.2 238 81.1
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 2.1e-98 362.8 238 81.1
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 2.7e-98 362.5 238 80.3
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 2.7e-98 362.5 238 79.8
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 3.5e-98 362.1 236 81.4
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 3.5e-98 362.1 238 79.0
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.6e-98 361.7 234 83.3
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 6.0e-98 361.3 237 79.3
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 6.0e-98 361.3 237 79.3
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.0e-97 360.5 237 79.3
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.0e-97 360.5 238 78.6
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.0e-97 360.5 238 80.7
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.3e-97 360.1 237 79.3
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.3e-97 360.1 228 82.0
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 1.3e-97 360.1 226 84.1
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.7e-97 359.8 237 78.9
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 5.1e-97 358.2 231 81.4
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 5.1e-97 358.2 231 81.8
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 6.6e-97 357.8 238 77.7
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 8.7e-97 357.5 237 78.9
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 5.6e-96 354.8 231 81.0
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 5.6e-96 354.8 237 80.6
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.3e-95 353.6 238 78.2
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.3e-95 353.6 238 77.3
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.6e-95 352.1 238 78.2
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 3.1e-94 349.0 237 78.1
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 3.1e-94 349.0 226 81.4
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 5.3e-94 348.2 231 80.5
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.2e-93 347.1 226 81.0
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.2e-93 347.1 226 82.3
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.5e-93 346.7 214 85.0
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 9.9e-93 344.0 234 77.4
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 4.9e-92 341.7 259 74.9
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.9e-91 339.7 238 75.6
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.9e-91 339.7 260 72.7
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 9.3e-91 337.4 235 73.2
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 3.5e-90 335.5 241 74.3
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 4.3e-88 328.6 237 72.6
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 3.6e-87 325.5 198 85.9
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 8.1e-87 324.3 198 85.9
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.9e-86 321.2 243 69.1
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.6e-85 317.8 243 69.1
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 3.8e-84 315.5 245 68.2
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.8e-81 306.6 231 70.6
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 2.3e-81 306.2 236 71.6
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 9.6e-80 300.8 237 65.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 6.0e-74 281.6 238 66.8
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.6e-71 273.5 235 65.1
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 2.2e-68 263.1 185 75.1
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 5.7e-64 248.4 161 82.0
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-59 232.6 231 54.5
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.5e-53 213.8 158 70.3
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.4e-49 200.7 238 52.5
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 5.7e-48 195.3 127 81.1
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 7.0e-46 188.3 228 43.9
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 8.5e-44 181.4 125 81.6
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 2.8e-39 166.4 245 38.0
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 9.1e-38 161.4 240 41.7
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.2e-35 152.9 238 45.4
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 8.0e-34 148.3 95 74.7
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.0e-33 146.0 84 85.7
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.8e-31 139.0 234 36.3
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.7e-28 130.6 117 63.2
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 4.9e-23 112.5 235 34.9
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 6.4e-15 85.5 50 92.0
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.0e-12 78.2 48 87.5
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 3.1e-09 66.6 41 82.9
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 2.2e-07 60.5 73 50.7


User provided reference genes

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