Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 8.9e-98 360.1 167 100.0
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 2.5e-60 235.7 166 68.1
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.8e-58 229.6 166 65.1
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 3.1e-58 228.8 167 65.3
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 5.3e-58 228.0 171 61.4
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 3.4e-57 225.3 159 63.5
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 4.5e-57 224.9 166 61.4
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 5.8e-57 224.6 156 64.7
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 7.6e-57 224.2 166 63.3
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 2.2e-56 222.6 155 64.5
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 2.9e-56 222.2 166 62.0
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 6.4e-56 221.1 172 59.9
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 8.4e-56 220.7 153 66.0
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 8.4e-56 220.7 152 65.1
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 1.1e-55 220.3 156 62.2
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 1.9e-55 219.5 156 62.2
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 2.4e-55 219.2 168 60.1
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 3.2e-55 218.8 139 67.6
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 3.2e-55 218.8 161 62.7
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 3.2e-55 218.8 151 62.9
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 4.2e-55 218.4 166 57.8
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 9.3e-55 217.2 143 66.4
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-54 216.9 166 57.2
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.2e-54 216.9 166 59.6
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.6e-54 216.5 166 59.6
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 1.6e-54 216.5 161 61.5
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.1e-54 216.1 166 59.6
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 2.1e-54 216.1 159 62.3
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 3.5e-54 215.3 167 58.1
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.3e-53 213.4 131 67.2
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 1.8e-53 213.0 168 61.9
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 1.8e-53 213.0 163 57.1
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 2.3e-53 212.6 140 67.1
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 3.0e-53 212.2 145 66.2
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 3.0e-53 212.2 166 56.0
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.0e-53 212.2 166 56.0
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 3.0e-53 212.2 166 59.0
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 3.0e-53 212.2 171 59.6
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 3.0e-53 212.2 165 56.4
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.1e-53 211.5 166 56.0
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 6.7e-53 211.1 162 59.3
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 8.7e-53 210.7 167 61.7
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 8.7e-53 210.7 123 68.3
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.1e-52 210.3 149 61.1
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.1e-52 210.3 162 54.9
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.1e-52 210.3 154 61.7
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.1e-52 210.3 117 74.4
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 1.9e-52 209.5 136 66.2
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.5e-52 209.1 163 58.3
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 2.5e-52 209.1 144 65.3
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.5e-52 209.1 164 58.5
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 3.3e-52 208.8 134 66.4
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 3.3e-52 208.8 143 63.6
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 4.3e-52 208.4 140 65.0
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 4.3e-52 208.4 146 61.0
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 5.6e-52 208.0 161 60.2
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 7.4e-52 207.6 157 61.1
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 7.4e-52 207.6 143 62.9
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 9.6e-52 207.2 133 64.7
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 9.6e-52 207.2 172 55.8
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.3e-51 206.8 151 63.6
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.3e-51 206.8 159 54.7
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 1.3e-51 206.8 170 60.0
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 1.3e-51 206.8 161 59.6
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.1e-51 206.1 172 56.4
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 2.8e-51 205.7 129 66.7
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 1.1e-50 203.8 140 63.6
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.4e-50 203.4 151 60.9
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 3.1e-50 202.2 151 62.3
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 4.0e-50 201.8 138 62.3
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 5.3e-50 201.4 148 58.1
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 1.5e-49 199.9 162 58.0
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 2.0e-49 199.5 143 58.7
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 7.6e-49 197.6 155 56.1
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 3.8e-48 195.3 170 55.3
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.9e-47 193.0 155 58.1
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 4.6e-46 188.3 130 62.3
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 2.2e-43 179.5 144 53.5
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.2e-43 179.5 140 56.4
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.8e-43 179.1 141 56.7
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 4.8e-43 178.3 127 63.0
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 2.6e-41 172.6 117 66.7
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 5.9e-41 171.4 126 55.6
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 7.6e-41 171.0 138 53.6
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 3.6e-38 162.2 115 53.9
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 4.6e-38 161.8 120 55.8
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.8e-37 159.8 188 45.7
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.1e-36 157.1 153 52.3
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 3.3e-36 155.6 164 50.6
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 4.3e-36 155.2 85 75.3
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 8.2e-35 151.0 153 51.0
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 9.1e-34 147.5 170 45.3
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.2e-33 147.1 164 48.8
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 2.2e-32 142.9 145 46.2
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 4.7e-30 135.2 108 57.4
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.7e-27 125.6 154 38.3
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 9.1e-18 94.4 74 62.2
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.6e-17 92.8 56 67.9
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 1.6e-14 83.6 172 35.5
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 2.7e-14 82.8 75 56.0
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 6.7e-13 78.2 74 54.1


User provided reference genes

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