Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.8e-193 679.1 341 100.0
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 1.0e-124 450.7 342 72.2
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.5e-123 446.8 372 69.1
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 7.3e-123 444.5 341 71.3
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 7.3e-123 444.5 372 68.0
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 1.2e-122 443.7 380 64.7
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 1.4e-121 440.3 342 70.2
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.4e-121 439.5 380 63.9
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 8.9e-121 437.6 387 65.6
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 4.4e-120 435.3 377 66.8
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 9.9e-120 434.1 390 63.8
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.7e-119 433.3 369 65.9
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 1.7e-119 433.3 357 66.4
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.2e-119 433.0 373 65.1
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 3.8e-119 432.2 374 64.7
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 4.9e-119 431.8 368 64.4
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.9e-118 429.9 360 67.2
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 2.4e-118 429.5 369 65.9
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.2e-118 429.1 360 67.2
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 9.3e-118 427.6 346 68.5
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 9.3e-118 427.6 378 63.5
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.6e-117 426.8 368 64.7
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.5e-117 425.6 380 63.9
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 6.6e-116 421.4 384 64.1
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 8.7e-116 421.0 335 67.5
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.1e-115 420.6 335 68.7
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 4.3e-115 418.7 369 63.7
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 5.6e-115 418.3 348 66.4
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 5.6e-115 418.3 377 62.1
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 2.8e-114 416.0 336 67.9
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 3.6e-114 415.6 367 64.9
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 3.6e-114 415.6 378 62.4
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 6.2e-114 414.8 339 68.1
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 6.2e-114 414.8 384 62.0
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.4e-113 413.7 358 65.4
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 1.4e-113 413.7 359 65.5
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 1.8e-113 413.3 342 66.1
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.8e-113 413.3 359 64.3
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 2.4e-113 412.9 357 64.7
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 2.4e-113 412.9 380 63.4
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.4e-113 412.9 349 65.9
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 2.4e-113 412.9 349 65.9
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 6.9e-113 411.4 344 67.2
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 6.9e-113 411.4 369 65.9
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 4.4e-112 408.7 339 67.3
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 4.4e-112 408.7 339 67.3
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 5.8e-112 408.3 340 66.5
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 5.8e-112 408.3 339 66.7
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 5.8e-112 408.3 340 66.5
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 5.8e-112 408.3 341 67.2
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 9.9e-112 407.5 345 67.5
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.3e-111 407.1 339 67.8
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 1.7e-111 406.8 333 68.2
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 2.2e-111 406.4 362 63.8
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 6.4e-111 404.8 341 65.1
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 6.4e-111 404.8 345 65.5
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 8.4e-111 404.4 389 62.0
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 1.1e-110 404.1 384 60.9
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 1.4e-110 403.7 333 67.0
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.4e-110 403.7 340 65.6
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 2.4e-110 402.9 353 62.9
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 4.2e-110 402.1 381 63.0
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 5.4e-110 401.7 378 62.7
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 9.3e-110 401.0 402 58.2
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 2.1e-109 399.8 336 66.4
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 2.7e-109 399.4 338 66.9
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 3.5e-109 399.1 363 64.5
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 1.0e-108 397.5 343 64.7
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 1.7e-108 396.7 330 67.0
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.3e-108 396.4 342 65.8
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 2.3e-108 396.4 347 64.8
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 3.0e-108 396.0 346 62.7
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 3.0e-108 396.0 383 61.1
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 3.9e-108 395.6 348 63.5
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 5.1e-108 395.2 387 60.7
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 6.6e-108 394.8 335 66.6
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 8.7e-108 394.4 342 65.5
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.9e-107 393.3 344 64.2
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 9.6e-107 391.0 351 65.2
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 6.9e-105 384.8 354 62.4
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 2.6e-104 382.9 348 62.4
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.3e-103 380.6 354 61.9
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 2.4e-102 376.3 345 61.2
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 3.2e-102 375.9 317 65.9
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 4.2e-102 375.6 280 72.9
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 1.2e-101 374.0 379 57.3
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 7.9e-101 371.3 328 62.8
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.8e-100 370.2 330 65.2
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.5e-99 367.1 380 57.1
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.9e-99 366.7 320 66.6
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 3.3e-99 365.9 337 60.8
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 5.6e-99 365.2 352 59.4
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 7.4e-99 364.8 350 59.7
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 8.1e-98 361.3 331 62.2
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 5.3e-97 358.6 337 58.8
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.9e-97 358.2 331 61.9
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 2.0e-96 356.7 287 67.9
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 7.6e-96 354.8 309 64.1
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 1.9e-94 350.1 337 59.6
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 5.5e-94 348.6 341 58.1
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 5.1e-92 342.0 288 66.0
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 6.5e-87 325.1 243 72.0
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.2e-85 320.9 345 54.8
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 3.7e-82 309.3 291 59.5
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 4.1e-81 305.8 290 58.6
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 5.9e-80 302.0 331 52.6
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.6e-77 293.9 282 56.4
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 4.4e-75 285.8 235 67.7
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 1.7e-71 273.9 286 51.7
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.1e-67 261.2 297 50.5
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 1.4e-60 237.7 277 51.6
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 2.6e-59 233.4 206 61.7
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 3.1e-57 226.5 296 45.9
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 7.0e-57 225.3 249 49.0
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 1.7e-55 220.7 141 81.6
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 3.2e-54 216.5 184 65.2
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 8.0e-53 211.8 258 45.7
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 1.2e-51 208.0 155 68.4
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 6.3e-50 202.2 148 71.6
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 3.1e-49 199.9 146 71.9
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.7e-48 196.8 238 51.3
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 1.3e-47 194.5 148 69.6
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 1.3e-47 194.5 154 68.8
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 8.3e-42 175.3 120 75.0
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 4.7e-37 159.5 188 51.6
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 5.2e-36 156.0 120 65.8
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 5.8e-27 125.9 96 65.6
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.9e-25 120.9 75 80.0
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 3.5e-24 116.7 158 45.6
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 7.8e-24 115.5 113 59.3
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.1e-22 111.7 145 51.0
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.0e-20 103.2 66 75.8
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 9.2e-17 92.0 246 30.5
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 1.2e-16 91.7 137 44.5
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 3.3e-14 83.6 91 51.6
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 9.5e-14 82.0 109 48.6
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 2.6e-11 73.9 121 35.5
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 4.4e-11 73.2 237 27.8
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 4.3e-06 56.6 241 24.9


User provided reference genes

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