Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc113.20 Carica papaya HOM05D002635 ORTHO05D002756 1.2e-80 303.1 155 100.0
QL02p101856 Quercus lobata HOM05D002635 ORTHO05D002756 4.9e-42 174.9 134 72.4
Manes.10G115400 Manihot esculenta HOM05D002635 ORTHO05D002756 6.0e-40 167.9 112 78.6
Cfa004466 Carpinus fangiana HOM05D002635 ORTHO05D002756 1.0e-39 167.2 114 78.9
Haze_10023 Corylus avellana HOM05D002635 ORTHO05D002756 1.0e-39 167.2 114 78.9
Manes.07G026600 Manihot esculenta HOM05D002635 ORTHO05D002756 1.7e-39 166.4 118 73.7
CiPaw.05G002800 Carya illinoinensis HOM05D002635 ORTHO05D002756 6.6e-39 164.5 111 80.2
COL.COLO4_17694 Corchorus olitorius HOM05D002635 ORTHO05D002756 1.5e-38 163.3 111 76.6
Thecc.02G014300 Theobroma cacao HOM05D002635 ORTHO05D002756 1.3e-37 160.2 124 71.0
Duzib132G0923 Durio zibethinus HOM05D002635 ORTHO05D002756 2.8e-37 159.1 111 73.9
Duzib052G0871 Durio zibethinus HOM05D002635 ORTHO05D002756 4.8e-37 158.3 110 75.5
Atru.chr6.455 Acer truncatum HOM05D002635 ORTHO05D002756 1.1e-36 157.1 115 72.2
TWI59G0859 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 1.4e-36 156.8 116 75.0
Ciclev10001394m.g Citrus clementina HOM05D002635 ORTHO05D002756 1.5e-35 153.3 113 70.8
Eucgr.G00246 Eucalyptus grandis HOM05D002635 ORTHO05D002756 2.0e-35 152.9 112 73.2
arahy.Tifrunner.gnm1.ann1.3P7FNU Arachis hypogaea HOM05D002635 ORTHO05D002756 4.5e-35 151.8 117 70.9
arahy.Tifrunner.gnm1.ann1.I3LLGY Arachis hypogaea HOM05D002635 ORTHO05D002756 4.5e-35 151.8 117 70.9
FvH4_5g28140 Fragaria vesca HOM05D002635 ORTHO05D002756 5.8e-35 151.4 110 75.5
FAN04G1944 Fragaria x ananassa HOM05D002635 ORTHO05D002756 2.2e-34 149.4 109 74.3
Prupe.1G582400 Prunus persica HOM05D002635 ORTHO05D002756 3.8e-34 148.7 110 75.5
VMungo0540G0642 Vigna mungo HOM05D002635 ORTHO05D002756 4.9e-34 148.3 115 72.2
Glyma.12G165000 Glycine max HOM05D002635 ORTHO05D002756 8.4e-34 147.5 113 72.6
Potri.004G227000 Populus trichocarpa HOM05D002635 ORTHO05D002756 8.4e-34 147.5 108 75.0
FAN08G2963 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.4e-33 146.7 110 73.6
FAN18G1247 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.4e-33 146.7 110 73.6
Gohir.A04G134000 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.4e-33 146.7 108 71.3
CiPaw.06G175900 Carya illinoinensis HOM05D002635 ORTHO05D002756 1.9e-33 146.4 112 72.3
Glyma.16G001300 Glycine max HOM05D002635 ORTHO05D002756 1.9e-33 146.4 119 69.7
Phvul.006G220600 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 5.4e-33 144.8 115 69.6
Gohir.D04G177200 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.2e-32 143.7 108 70.4
Gorai.012G170100 Gossypium raimondii HOM05D002635 ORTHO05D002756 1.2e-32 143.7 108 70.4
TWI23G0700 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 2.1e-32 142.9 116 69.8
MELO3C016485.2 Cucumis melo HOM05D002635 ORTHO05D002756 2.7e-32 142.5 116 71.6
CsaV3_3G006550 Cucumis sativus L. HOM05D002635 ORTHO05D002756 2.7e-32 142.5 116 71.6
Potri.003G003500 Populus trichocarpa HOM05D002635 ORTHO05D002756 3.5e-32 142.1 110 70.9
RcHm_v2.0_Chr7g0220291 Rosa chinensis HOM05D002635 ORTHO05D002756 3.5e-32 142.1 111 73.0
Sed0008691 Sechium edule HOM05D002635 ORTHO05D002756 3.5e-32 142.1 117 71.8
MD15G1440100 Malus domestica HOM05D002635 ORTHO05D002756 7.9e-32 141.0 109 72.5
Sabra03G0001800 Salix brachista HOM05D002635 ORTHO05D002756 1.0e-31 140.6 110 69.1
MD08G1245000 Malus domestica HOM05D002635 ORTHO05D002756 2.3e-31 139.4 109 71.6
Ca_00022_v3 Cicer arietinum L. HOM05D002635 ORTHO05D002756 6.7e-31 137.9 119 67.2
TPR.G2087 Trifolium pratense HOM05D002635 ORTHO05D002756 1.5e-30 136.7 119 68.1
Cc02_g23390 Coffea canephora HOM05D002635 ORTHO05D002756 5.6e-30 134.8 117 70.9
Medtr2g005260 Medicago truncatula HOM05D002635 ORTHO05D002756 5.6e-30 134.8 119 66.4
Psat1g223800 Pisum sativum HOM05D002635 ORTHO05D002756 7.4e-30 134.4 119 65.5
Lj6g0026247 Lotus japonicus HOM05D002635 ORTHO05D002756 8.1e-29 131.0 119 65.5
Dinv19431 Davidia involucrata HOM05D002635 ORTHO05D002756 1.8e-28 129.8 121 66.1
Sabra01G0172400 Salix brachista HOM05D002635 ORTHO05D002756 5.3e-28 128.3 97 72.2
Lalb_Chr18g0061101 Lupinus albus HOM05D002635 ORTHO05D002756 1.4e-25 120.2 117 63.2
PGSC0003DMG400024875 Solanum tuberosum HOM05D002635 ORTHO05D002756 2.1e-24 116.3 122 56.6
Dinv29614 Davidia involucrata HOM05D002635 ORTHO05D002756 2.7e-24 115.9 100 69.0
CAN.G855.35 Capsicum annuum HOM05D002635 ORTHO05D002756 3.5e-24 115.5 116 59.5
Peaxi162Scf00011g01619 Petunia axillaris HOM05D002635 ORTHO05D002756 2.3e-23 112.8 111 62.2
Sopen01g045630 Solanum pennellii HOM05D002635 ORTHO05D002756 3.0e-23 112.5 122 54.9
CSS0009773 Camellia sinensis var. sinensis HOM05D002635 ORTHO05D002756 3.9e-23 112.1 128 61.7
CSS0014121 Camellia sinensis var. sinensis HOM05D002635 ORTHO05D002756 3.9e-23 112.1 128 61.7
Hma1.2p1_1368F.1_g278530 Hydrangea macrophylla HOM05D002635 ORTHO05D002756 5.1e-23 111.7 114 63.2
Hma1.2p1_0157F.1_g068985 Hydrangea macrophylla HOM05D002635 ORTHO05D002756 8.7e-23 110.9 113 63.7
Nitab4.5_0001057g0160 Nicotiana tabacum HOM05D002635 ORTHO05D002756 1.5e-22 110.2 119 56.3
PGR142G4069 Punica granatum HOM05D002635 ORTHO05D002756 1.5e-22 110.2 107 61.7
Nitab4.5_0002546g0060 Nicotiana tabacum HOM05D002635 ORTHO05D002756 2.5e-22 109.4 119 56.3
TAR381G0357 Trochodendron aralioides HOM05D002635 ORTHO05D002756 5.7e-22 108.2 118 61.9
DCAR_031795 Daucus carota HOM05D002635 ORTHO05D002756 2.1e-21 106.3 122 55.7
MSTRG.16479 Avicennia marina HOM05D002635 ORTHO05D002756 6.9e-20 101.3 112 58.0
DCAR_021340 Daucus carota HOM05D002635 ORTHO05D002756 1.3e-18 97.1 99 62.6
HanXRQChr03g0068081 Helianthus annuus HOM05D002635 ORTHO05D002756 3.8e-18 95.5 114 53.5
TAR624G0320 Trochodendron aralioides HOM05D002635 ORTHO05D002756 3.8e-18 95.5 114 57.9
Rhsim11G0121400 Rhododendron simsii HOM05D002635 ORTHO05D002756 3.2e-17 92.4 115 54.8
PGR142G3898 Punica granatum HOM05D002635 ORTHO05D002756 4.2e-17 92.0 129 48.1
Actinidia00167 Actinidia chinensis HOM05D002635 ORTHO05D002756 7.1e-17 91.3 101 58.4
Lsat_1_v5_gn_9_121240 Lactuca sativa HOM05D002635 ORTHO05D002756 2.7e-16 89.4 114 53.5
HanXRQChr10g0299381 Helianthus annuus HOM05D002635 ORTHO05D002756 6.1e-16 88.2 116 52.6
GSVIVG01023219001 Vitis vinifera HOM05D002635 ORTHO05D002756 6.1e-16 88.2 61 75.4
Nn5g27275 Nelumbo nucifera HOM05D002635 ORTHO05D002756 1.0e-15 87.4 144 49.3
Actinidia26186 Actinidia chinensis HOM05D002635 ORTHO05D002756 1.8e-15 86.7 102 55.9
Aqoxy5G00844 Aquilegia oxysepala HOM05D002635 ORTHO05D002756 2.5e-14 82.8 118 51.7
Phvul.003G075300 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 7.4e-14 81.3 92 55.4
VMungo1215G1734 Vigna mungo HOM05D002635 ORTHO05D002756 2.8e-13 79.3 99 55.6
MSTRG.27874 Avicennia marina HOM05D002635 ORTHO05D002756 4.8e-13 78.6 116 51.7
Rhsim05G0116700 Rhododendron simsii HOM05D002635 ORTHO05D002756 4.8e-13 78.6 100 55.0
DCAR_006659 Daucus carota HOM05D002635 ORTHO05D002756 8.2e-13 77.8 98 54.1
MBI03_g28424_MAGBIO Magnolia biondii HOM05D002635 ORTHO05D002756 2.4e-12 76.3 120 48.3
Lsat_1_v5_gn_5_104780 Lactuca sativa HOM05D002635 ORTHO05D002756 4.1e-12 75.5 110 49.1
Lj9P296T23 Lonicera japonica HOM05D002635 ORTHO05D002756 6.9e-12 74.7 115 48.7
PSO017G5438 Papaver somniferum HOM05D002635 ORTHO05D002756 1.2e-11 73.9 131 50.4
PSO170G5519 Papaver somniferum HOM05D002635 ORTHO05D002756 1.5e-11 73.6 130 50.8
Gohir.A03G216000 Gossypium hirsutum HOM05D002635 ORTHO05D002756 2.0e-11 73.2 91 56.0
Peaxi162Scf00011g01728 Petunia axillaris HOM05D002635 ORTHO05D002756 2.0e-11 73.2 62 64.5
SGA_v2.0_scaffold131G34378 Striga asiatica HOM05D002635 ORTHO05D000003 3.4e-11 72.4 109 52.3
Gohir.D02G237600 Gossypium hirsutum HOM05D002635 ORTHO05D002756 4.5e-11 72.0 91 54.9
MSTRG.5197 Avicennia marina HOM05D002635 ORTHO05D002756 5.9e-11 71.6 94 53.2
Migut.N00855 Erythranthe guttata HOM05D002635 ORTHO05D002756 7.7e-11 71.2 111 54.1
Gorai.005G266100 Gossypium raimondii HOM05D002635 ORTHO05D002756 7.7e-11 71.2 91 54.9
EL10Ac4g09691 Beta vulgaris HOM05D002635 ORTHO05D002756 8.5e-10 67.8 127 48.0
Lj5P271T19 Lonicera japonica HOM05D002635 ORTHO05D002756 1.4e-09 67.0 107 46.7
Oeu021642.1 Olea europaea HOM05D002635 ORTHO05D002756 1.9e-09 66.6 68 54.4
Oeu021643.1 Olea europaea HOM05D002635 ORTHO05D002756 1.9e-09 66.6 68 54.4
Oeu021644.1 Olea europaea HOM05D002635 ORTHO05D002756 1.9e-09 66.6 68 54.4
Oeu021645.1 Olea europaea HOM05D002635 ORTHO05D002756 1.9e-09 66.6 68 54.4
unitig_749.g14215 Utricularia gibba HOM05D002635 ORTHO05D002756 3.2e-09 65.9 105 47.6
unitig_26.g9163 Utricularia gibba HOM05D002635 ORTHO05D002756 3.6e-08 62.4 90 50.0
AUR62000568 Chenopodium quinoa HOM05D002635 ORTHO05D002756 7.9e-08 61.2 118 46.6
Ah.06g188440 Amaranthus hybridus HOM05D002635 ORTHO05D002756 1.0e-07 60.8 133 47.4
Gohir.D01G131300 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.0e-07 60.8 96 46.9
Gorai.002G163000 Gossypium raimondii HOM05D002635 ORTHO05D002756 1.0e-07 60.8 96 46.9
unitig_699.g19846 Utricularia gibba HOM05D002635 ORTHO05D002756 3.9e-07 58.9 113 47.8
SEGI_27222 Sequoiadendron giganteum HOM05D002635 ORTHO05D002756 1.1e-06 57.4 122 39.3


User provided reference genes

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