Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 7.3e-89 330.5 162 100.0
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 1.3e-66 256.5 180 72.8
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.1e-64 249.2 183 69.4
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 2.8e-64 248.8 168 73.2
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 2.8e-64 248.8 182 68.7
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 2.8e-64 248.8 182 68.7
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 2.4e-63 245.7 182 68.7
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 5.3e-63 244.6 188 69.7
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.5e-62 243.0 178 70.2
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.6e-62 242.3 178 69.7
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 3.4e-62 241.9 177 72.3
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 5.8e-62 241.1 177 72.9
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.0e-61 240.4 182 65.9
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.7e-61 239.6 177 71.8
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.7e-61 239.6 181 68.5
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 3.8e-61 238.4 180 67.8
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 3.8e-61 238.4 186 68.3
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 6.5e-61 237.7 181 67.4
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.1e-60 236.9 181 68.0
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.9e-60 236.1 184 67.9
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 2.5e-60 235.7 181 66.9
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 4.2e-60 235.0 177 67.8
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 9.3e-60 233.8 182 66.5
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 9.3e-60 233.8 180 67.2
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 1.2e-59 233.4 180 66.7
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 1.6e-59 233.0 185 65.9
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 2.1e-59 232.6 178 67.4
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 2.1e-59 232.6 183 67.2
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 2.7e-59 232.3 180 66.7
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 3.5e-59 231.9 129 83.7
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 3.5e-59 231.9 182 67.0
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 4.6e-59 231.5 179 65.9
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 4.6e-59 231.5 180 64.4
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 7.9e-59 230.7 181 66.3
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 7.9e-59 230.7 180 66.7
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 1.8e-58 229.6 181 64.6
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.8e-58 229.6 132 81.1
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 3.0e-58 228.8 182 63.7
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 3.9e-58 228.4 167 68.9
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 5.1e-58 228.0 169 66.3
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 6.7e-58 227.6 176 67.0
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.5e-57 226.5 126 85.7
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 3.3e-57 225.3 132 79.5
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 9.6e-57 223.8 180 64.4
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 1.6e-56 223.0 174 64.9
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 2.8e-56 222.2 168 69.6
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 3.7e-56 221.9 182 63.7
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 3.7e-56 221.9 162 67.9
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 3.7e-56 221.9 175 65.7
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.8e-55 219.5 154 69.5
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 1.8e-55 219.5 185 64.3
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 2.4e-55 219.2 185 64.3
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 3.1e-55 218.8 185 63.8
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 3.1e-55 218.8 185 63.8
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.2e-54 216.9 185 62.7
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 2.0e-54 216.1 171 66.1
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.6e-54 215.7 127 79.5
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 2.6e-54 215.7 155 66.5
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 4.5e-54 214.9 127 79.5
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 5.9e-54 214.5 182 61.0
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 1.3e-53 213.4 182 62.6
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 1.7e-53 213.0 183 63.4
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 2.2e-53 212.6 118 84.7
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 3.8e-53 211.8 179 64.2
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 6.5e-53 211.1 176 60.2
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 6.5e-53 211.1 139 74.1
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 6.5e-53 211.1 139 74.1
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 6.5e-53 211.1 181 58.0
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 8.4e-53 210.7 182 58.2
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 8.4e-53 210.7 182 63.2
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 1.1e-52 210.3 132 78.0
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.4e-52 209.9 177 63.3
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 1.9e-52 209.5 132 78.0
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 1.9e-52 209.5 132 77.3
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 1.9e-52 209.5 132 77.3
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 1.9e-52 209.5 132 77.3
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 2.5e-52 209.1 132 77.3
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 3.2e-52 208.8 132 77.3
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 3.2e-52 208.8 132 77.3
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 3.2e-52 208.8 179 61.5
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 5.5e-52 208.0 132 76.5
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 5.5e-52 208.0 132 77.3
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 5.5e-52 208.0 132 77.3
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 5.5e-52 208.0 132 76.5
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 5.5e-52 208.0 182 56.6
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.1e-51 206.1 121 79.3
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 2.1e-51 206.1 181 57.5
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 4.6e-51 204.9 134 76.1
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 7.9e-51 204.1 187 55.6
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 1.0e-50 203.8 177 59.3
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.0e-50 203.8 177 59.3
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 6.7e-50 201.1 182 58.2
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.5e-49 199.9 111 83.8
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.9e-49 199.5 156 67.9
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 4.3e-49 198.4 168 60.1
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 1.6e-48 196.4 157 61.1
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 3.1e-47 192.2 118 75.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.7e-45 186.4 170 62.4
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 5.1e-42 174.9 147 59.9
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 5.3e-39 164.9 142 59.9
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 9.1e-39 164.1 130 61.5
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 5.0e-37 158.3 113 67.3
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 8.2e-32 141.0 161 46.6
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 2.6e-25 119.4 114 53.5
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 2.6e-25 119.4 174 46.0
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 1.7e-21 106.7 124 51.6
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 2.2e-21 106.3 94 53.2
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 6.5e-21 104.8 104 47.1
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 3.6e-19 99.0 120 43.3
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 1.1e-12 77.4 84 50.0
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 4.7e-11 72.0 52 76.9
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 8.0e-11 71.2 111 39.6
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 3.0e-10 69.3 180 33.9
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 1.8e-07 60.1 180 29.4


User provided reference genes

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