Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc110.24 Carica papaya HOM05D000129 ORTHO05D118070 3.2e-32 141.0 64 100.0
Cpa.g.sc44.133 Carica papaya HOM05D000129 ORTHO05D000144 2.3e-09 65.1 76 50.0
RhsimUnG0023300 Rhododendron simsii HOM05D000129 ORTHO05D000144 1.9e-08 62.0 75 46.7
Duzib212G1011 Durio zibethinus HOM05D000129 ORTHO05D000144 3.3e-08 61.2 75 48.0
RhsimUnG0184000 Rhododendron simsii HOM05D000129 ORTHO05D000144 4.3e-08 60.8 75 45.3
Actinidia18526 Actinidia chinensis HOM05D000129 ORTHO05D000144 5.6e-08 60.5 74 45.9
CSS0023092 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 5.6e-08 60.5 75 45.3
RhsimUnG0184200 Rhododendron simsii HOM05D000129 ORTHO05D000144 7.3e-08 60.1 75 46.7
RhsimUnG0184300 Rhododendron simsii HOM05D000129 ORTHO05D000144 7.3e-08 60.1 75 44.0
RhsimUnG0023400 Rhododendron simsii HOM05D000129 ORTHO05D000144 9.5e-08 59.7 75 44.0
FvH4_4g01690 Fragaria vesca HOM05D000129 ORTHO05D000144 1.2e-07 59.3 74 47.3
FAN12G0748 Fragaria x ananassa HOM05D000129 ORTHO05D000144 1.2e-07 59.3 74 47.3
FAN17G2751 Fragaria x ananassa HOM05D000129 ORTHO05D000144 1.2e-07 59.3 74 47.3
FAN17G3036 Fragaria x ananassa HOM05D000129 ORTHO05D000144 1.2e-07 59.3 74 47.3
Manes.03G172000 Manihot esculenta HOM05D000129 ORTHO05D000144 1.2e-07 59.3 75 46.7
Rhsim02G0030800 Rhododendron simsii HOM05D000129 ORTHO05D000144 1.2e-07 59.3 75 44.0
RhsimUnG0183900 Rhododendron simsii HOM05D000129 ORTHO05D000144 1.2e-07 59.3 75 44.0
RcHm_v2.0_Chr4g0388301 Rosa chinensis HOM05D000129 ORTHO05D000144 1.2e-07 59.3 74 47.3
Haze_11243 Corylus avellana HOM05D000129 ORTHO05D000144 1.6e-07 58.9 75 42.7
Haze_11248 Corylus avellana HOM05D000129 ORTHO05D000144 1.6e-07 58.9 75 42.7
CSS0042734 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 2.1e-07 58.5 75 45.3
RcHm_v2.0_Chr4g0388501 Rosa chinensis HOM05D000129 ORTHO05D000144 2.1e-07 58.5 74 45.9
CiPaw.01G194400 Carya illinoinensis HOM05D000129 ORTHO05D000144 2.8e-07 58.2 75 42.7
Gorai.006G244700 Gossypium raimondii HOM05D000129 ORTHO05D000144 2.8e-07 58.2 67 49.3
RcHm_v2.0_Chr4g0385871 Rosa chinensis HOM05D000129 ORTHO05D000144 2.8e-07 58.2 74 45.9
RcHm_v2.0_Chr4g0388521 Rosa chinensis HOM05D000129 ORTHO05D000144 2.8e-07 58.2 74 45.9
vmacro15390 Vaccinium macrocarpon HOM05D000129 ORTHO05D000144 2.8e-07 58.2 75 45.3
Actinidia08462 Actinidia chinensis HOM05D000129 ORTHO05D000144 3.6e-07 57.8 74 44.6
Actinidia13959 Actinidia chinensis HOM05D000129 ORTHO05D000144 3.6e-07 57.8 74 44.6
arahy.Tifrunner.gnm1.ann1.7VP0DB Arachis hypogaea HOM05D000129 ORTHO05D000144 3.6e-07 57.8 78 44.9
Cfa008420 Carpinus fangiana HOM05D000129 ORTHO05D000144 3.6e-07 57.8 75 41.3
Cfa008424 Carpinus fangiana HOM05D000129 ORTHO05D000144 3.6e-07 57.8 75 41.3
Dinv14056 Davidia involucrata HOM05D000129 ORTHO05D000144 3.6e-07 57.8 74 44.6
Dinv14058 Davidia involucrata HOM05D000129 ORTHO05D000144 3.6e-07 57.8 74 44.6
CSS0035579 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 4.7e-07 57.4 75 44.0
CSS0049120 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 4.7e-07 57.4 75 45.3
Cfa008418 Carpinus fangiana HOM05D000129 ORTHO05D000144 4.7e-07 57.4 75 44.0
Duzib151G0066 Durio zibethinus HOM05D000129 ORTHO05D000144 4.7e-07 57.4 75 44.0
Duzib151G1097 Durio zibethinus HOM05D000129 ORTHO05D000144 4.7e-07 57.4 75 44.0
Gohir.D09G222300 Gossypium hirsutum HOM05D000129 ORTHO05D000144 4.7e-07 57.4 75 45.3
Gorai.006G243500 Gossypium raimondii HOM05D000129 ORTHO05D000144 4.7e-07 57.4 75 45.3
RcHm_v2.0_Chr4g0388341 Rosa chinensis HOM05D000129 ORTHO05D000144 4.7e-07 57.4 74 44.6
Thecc.04G240900 Theobroma cacao HOM05D000129 ORTHO05D000144 4.7e-07 57.4 75 44.0
Ciclev10003452m.g Citrus clementina HOM05D000129 ORTHO05D000144 6.2e-07 57.0 62 50.0
Oeu058955.2 Olea europaea HOM05D000129 ORTHO05D000144 6.2e-07 57.0 75 44.0
Oeu063365.1 Olea europaea HOM05D000129 ORTHO05D000144 6.2e-07 57.0 75 44.0
Rhsim02G0031100 Rhododendron simsii HOM05D000129 ORTHO05D000144 6.2e-07 57.0 75 44.0
Actinidia18527 Actinidia chinensis HOM05D000129 ORTHO05D000144 8.1e-07 56.6 74 44.6
FAN12G4228 Fragaria x ananassa HOM05D000129 ORTHO05D000144 1.1e-06 56.2 74 45.9
RcHm_v2.0_Chr4g0388321 Rosa chinensis HOM05D000129 ORTHO05D000144 1.1e-06 56.2 74 44.6
vmacro15384 Vaccinium macrocarpon HOM05D000129 ORTHO05D000144 1.1e-06 56.2 75 42.7
CSS0012648 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 1.4e-06 55.8 74 44.6
CSS0034835 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 1.4e-06 55.8 74 44.6
CiPaw.01G194100 Carya illinoinensis HOM05D000129 ORTHO05D000144 1.4e-06 55.8 75 42.7
Haze_11244 Corylus avellana HOM05D000129 ORTHO05D000144 1.4e-06 55.8 75 42.7
FAN17G0309 Fragaria x ananassa HOM05D000129 ORTHO05D000144 1.4e-06 55.8 75 44.0
FAN17G1950 Fragaria x ananassa HOM05D000129 ORTHO05D000144 1.4e-06 55.8 74 45.9
Prupe.1G023200 Prunus persica HOM05D000129 ORTHO05D000144 1.4e-06 55.8 75 41.3
Rhsim02G0030000 Rhododendron simsii HOM05D000129 ORTHO05D000144 1.4e-06 55.8 75 40.0
COL.COLO4_13185 Corchorus olitorius HOM05D000129 ORTHO05D000144 1.8e-06 55.5 75 44.0
Rhsim02G0030100 Rhododendron simsii HOM05D000129 ORTHO05D000144 1.8e-06 55.5 75 42.7
Rhsim02G0031000 Rhododendron simsii HOM05D000129 ORTHO05D000144 1.8e-06 55.5 75 42.7
CSS0012503 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 2.3e-06 55.1 74 44.6
CANSAT78G0488 Cannabis sativa HOM05D000129 ORTHO05D000144 2.3e-06 55.1 74 47.3
DCAR_024185 Daucus carota HOM05D000129 ORTHO05D000144 2.3e-06 55.1 74 43.2
FvH4_4g01640 Fragaria vesca HOM05D000129 ORTHO05D000144 2.3e-06 55.1 75 44.0
FAN12G2190 Fragaria x ananassa HOM05D000129 ORTHO05D000144 2.3e-06 55.1 75 44.0
QL06p000021 Quercus lobata HOM05D000129 ORTHO05D000144 2.3e-06 55.1 74 45.9
QL06p000597 Quercus lobata HOM05D000129 ORTHO05D000144 2.3e-06 55.1 74 44.6
QL06p000616 Quercus lobata HOM05D000129 ORTHO05D000144 2.3e-06 55.1 74 43.2
Thecc.04G240800 Theobroma cacao HOM05D000129 ORTHO05D000144 2.3e-06 55.1 75 42.7
vmacro09287 Vaccinium macrocarpon HOM05D000129 ORTHO05D000144 2.3e-06 55.1 75 41.3
vmacro22918 Vaccinium macrocarpon HOM05D000129 ORTHO05D000144 2.3e-06 55.1 75 41.3
CSS0002186 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 3.1e-06 54.7 74 43.2
Dinv44590 Davidia involucrata HOM05D000129 ORTHO05D000144 3.1e-06 54.7 74 43.2
Lj3C723T5 Lonicera japonica HOM05D000129 ORTHO05D000144 3.1e-06 54.7 75 44.0
Lj3P722T29 Lonicera japonica HOM05D000129 ORTHO05D000144 3.1e-06 54.7 75 44.0
Manes.15G033700 Manihot esculenta HOM05D000129 ORTHO05D000144 3.1e-06 54.7 75 42.7
Phvul.001G155150 Phaseolus vulgaris HOM05D000129 ORTHO05D000144 3.1e-06 54.7 75 42.7
Phvul.004G046200 Phaseolus vulgaris HOM05D000129 ORTHO05D000144 3.1e-06 54.7 74 45.9
RcHm_v2.0_Chr4g0388261 Rosa chinensis HOM05D000129 ORTHO05D000144 3.1e-06 54.7 75 42.7
RcHm_v2.0_Chr4g0388491 Rosa chinensis HOM05D000129 ORTHO05D000144 3.1e-06 54.7 74 44.6
VMungo1383G2344 Vigna mungo HOM05D000129 ORTHO05D000144 3.1e-06 54.7 75 41.3
CANSAT78G1414 Cannabis sativa HOM05D000129 ORTHO05D000144 4.0e-06 54.3 74 48.6
CANSAT78G2206 Cannabis sativa HOM05D000129 ORTHO05D000144 4.0e-06 54.3 74 48.6
Cfa008421 Carpinus fangiana HOM05D000129 ORTHO05D000144 4.0e-06 54.3 75 40.0
Cfa008425 Carpinus fangiana HOM05D000129 ORTHO05D000144 4.0e-06 54.3 75 40.0
Lj3C723T3 Lonicera japonica HOM05D000129 ORTHO05D000144 4.0e-06 54.3 75 44.0
MD15G1425900 Malus domestica HOM05D000129 ORTHO05D000144 4.0e-06 54.3 76 43.4
MD16G1201800 Malus domestica HOM05D000129 ORTHO05D000144 4.0e-06 54.3 76 43.4
QL06p000709 Quercus lobata HOM05D000129 ORTHO05D000144 4.0e-06 54.3 74 45.9
Haze_11246 Corylus avellana HOM05D000129 ORTHO05D000144 5.2e-06 53.9 75 40.0
Duzib138G1855 Durio zibethinus HOM05D000129 ORTHO05D000144 5.2e-06 53.9 75 42.7
QL06p000064 Quercus lobata HOM05D000129 ORTHO05D000144 5.2e-06 53.9 74 44.6
GSVIVG01018065001 Vitis vinifera HOM05D000129 ORTHO05D000144 5.2e-06 53.9 75 41.3
CiPaw.02G119000 Carya illinoinensis HOM05D000129 ORTHO05D000144 6.8e-06 53.5 75 40.0
Cc11_g03060 Coffea canephora HOM05D000129 ORTHO05D000144 6.8e-06 53.5 75 42.7
Gohir.D09G223200 Gossypium hirsutum HOM05D000129 ORTHO05D000144 6.8e-06 53.5 75 42.7
Prupe.1G023300 Prunus persica HOM05D000129 ORTHO05D000144 6.8e-06 53.5 75 40.0
Rhsim02G0037800 Rhododendron simsii HOM05D000129 ORTHO05D000144 6.8e-06 53.5 75 42.7
Thecc.01G270800 Theobroma cacao HOM05D000129 ORTHO05D000144 6.8e-06 53.5 75 42.7
Gohir.D08G055700 Gossypium hirsutum HOM05D000129 ORTHO05D000144 8.9e-06 53.1 75 41.3
Gorai.004G056600 Gossypium raimondii HOM05D000129 ORTHO05D000144 8.9e-06 53.1 75 41.3
Lalb_Chr03g0037531 Lupinus albus HOM05D000129 ORTHO05D000144 8.9e-06 53.1 74 43.2
QL06p000673 Quercus lobata HOM05D000129 ORTHO05D000144 8.9e-06 53.1 74 43.2
RcHm_v2.0_Chr4g0388331 Rosa chinensis HOM05D000129 ORTHO05D000144 8.9e-06 53.1 74 41.9


User provided reference genes

Program Settings