Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 1.1e-38 162.9 85 100.0
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 5.5e-11 70.9 43 81.4
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 6.1e-10 67.4 42 81.0
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.0e-09 66.6 43 74.4
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.0e-09 66.6 43 74.4
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 1.0e-09 66.6 42 73.8
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.4e-09 66.2 42 76.2
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 1.4e-09 66.2 42 76.2
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 1.4e-09 66.2 41 78.0
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 1.8e-09 65.9 42 73.8
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 1.8e-09 65.9 51 60.8
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 3.0e-09 65.1 43 72.1
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 3.0e-09 65.1 41 80.5
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 5.1e-09 64.3 42 69.0
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 6.7e-09 63.9 43 72.1
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 8.8e-09 63.5 42 73.8
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 8.8e-09 63.5 42 71.4
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 8.8e-09 63.5 42 73.8
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 8.8e-09 63.5 42 73.8
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 1.1e-08 63.2 41 75.6
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 1.1e-08 63.2 42 73.8
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.1e-08 63.2 42 71.4
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 1.9e-08 62.4 42 73.8
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 2.5e-08 62.0 56 57.1
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 3.3e-08 61.6 40 75.0
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 3.3e-08 61.6 41 73.2
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 3.3e-08 61.6 42 71.4
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 3.3e-08 61.6 42 71.4
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 4.3e-08 61.2 42 71.4
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 4.3e-08 61.2 45 64.4
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 4.3e-08 61.2 42 73.8
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 5.7e-08 60.8 56 58.9
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 5.7e-08 60.8 55 52.7
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 5.7e-08 60.8 42 66.7
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 7.4e-08 60.5 75 48.0
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 7.4e-08 60.5 48 56.2
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 9.7e-08 60.1 42 71.4
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 9.7e-08 60.1 41 70.7
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 9.7e-08 60.1 39 69.2
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 1.3e-07 59.7 46 65.2
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 1.3e-07 59.7 43 67.4
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 1.7e-07 59.3 42 66.7
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 2.2e-07 58.9 41 70.7
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 2.2e-07 58.9 41 70.7
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 2.2e-07 58.9 42 69.0
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 2.2e-07 58.9 41 73.2
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 3.7e-07 58.2 42 64.3
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 3.7e-07 58.2 41 73.2
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 3.7e-07 58.2 42 64.3
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 3.7e-07 58.2 42 66.7
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 4.8e-07 57.8 40 70.0
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 4.8e-07 57.8 41 70.7
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 6.3e-07 57.4 47 57.4
Hma1.2p1_0024F.1_g016010 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 1.1e-06 56.6 47 61.7
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.1e-06 56.6 41 65.9
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 1.4e-06 56.2 39 69.2
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 1.8e-06 55.8 42 64.3
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 3.1e-06 55.1 38 71.1
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 3.1e-06 55.1 41 63.4
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 4.1e-06 54.7 42 59.5
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 4.1e-06 54.7 41 63.4
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 5.3e-06 54.3 42 64.3
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 9.1e-06 53.5 42 61.9
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 9.1e-06 53.5 56 51.8


User provided reference genes

Program Settings