Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 4.8e-137 491.1 240 100.0
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 5.4e-80 301.6 257 60.3
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 8.6e-78 294.3 246 63.4
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 1.5e-77 293.5 247 62.3
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 3.3e-77 292.4 243 62.6
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 7.3e-77 291.2 243 63.0
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 9.5e-77 290.8 243 61.3
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.1e-76 289.7 243 61.7
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.3e-75 286.2 250 61.2
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 2.0e-74 283.1 243 61.7
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 5.8e-74 281.6 248 60.5
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 7.5e-74 281.2 248 60.5
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 7.5e-74 281.2 243 61.3
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 7.5e-74 281.2 243 61.3
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 7.5e-74 281.2 246 61.8
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 9.8e-74 280.8 261 57.1
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 9.8e-74 280.8 246 60.6
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 2.9e-73 279.3 259 58.3
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 2.9e-73 279.3 243 60.1
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 3.7e-73 278.9 223 62.8
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 3.7e-73 278.9 248 58.5
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 4.9e-73 278.5 256 57.8
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 4.9e-73 278.5 258 57.4
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 8.3e-73 277.7 245 61.2
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 8.3e-73 277.7 252 59.1
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.1e-72 277.3 258 55.8
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 1.9e-72 276.6 254 58.3
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 4.1e-72 275.4 248 58.5
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 1.2e-71 273.9 250 57.6
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.2e-71 273.9 263 55.5
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 1.6e-71 273.5 248 58.1
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.5e-71 272.3 244 59.4
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 4.6e-71 271.9 278 54.0
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 4.6e-71 271.9 233 61.8
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 4.6e-71 271.9 250 57.2
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 6.0e-71 271.6 260 57.3
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 6.0e-71 271.6 264 54.9
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 7.8e-71 271.2 248 57.7
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 1.0e-70 270.8 264 54.9
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 1.7e-70 270.0 263 55.1
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 3.0e-70 269.2 248 57.3
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 5.1e-70 268.5 248 56.9
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 6.6e-70 268.1 243 59.7
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 8.6e-70 267.7 248 57.7
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 8.6e-70 267.7 251 58.6
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 1.1e-69 267.3 256 56.6
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.1e-69 267.3 256 55.5
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.1e-69 267.3 257 56.8
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 1.5e-69 266.9 247 58.7
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 1.9e-69 266.5 248 57.3
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 1.9e-69 266.5 245 57.6
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 3.3e-69 265.8 246 57.7
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 3.3e-69 265.8 256 55.9
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 4.3e-69 265.4 261 55.6
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 4.3e-69 265.4 252 57.9
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 4.3e-69 265.4 247 57.9
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 7.3e-69 264.6 248 56.9
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 2.1e-68 263.1 274 54.7
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 3.6e-68 262.3 246 56.9
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 1.8e-67 260.0 246 56.5
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 3.1e-67 259.2 256 55.1
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.0e-67 258.8 303 50.2
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 6.8e-67 258.1 245 58.0
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 1.2e-66 257.3 246 56.9
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 1.5e-66 256.9 246 55.7
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 2.6e-66 256.1 243 56.8
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 3.2e-64 249.2 246 54.9
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 9.2e-64 247.7 246 54.5
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.6e-63 246.9 232 58.6
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 7.8e-63 244.6 255 53.3
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.0e-62 244.2 261 51.0
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.0e-62 244.2 234 55.6
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 2.3e-62 243.0 299 48.5
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 2.3e-62 243.0 247 54.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 6.6e-62 241.5 239 55.6
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 1.6e-60 236.9 254 52.4
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 1.8e-59 233.4 250 51.2
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 3.1e-59 232.6 243 51.4
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 4.0e-59 232.3 202 59.9
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 6.9e-59 231.5 238 51.7
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 8.4e-57 224.6 262 49.2
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 9.3e-56 221.1 247 51.8
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 3.0e-54 216.1 268 46.3
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 6.2e-52 208.4 196 56.6
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.1e-51 207.6 250 50.8
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 3.4e-50 202.6 284 40.1
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 2.9e-49 199.5 185 58.4
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.1e-48 197.6 284 43.0
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 3.2e-48 196.1 197 55.8
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 1.2e-47 194.1 247 48.2
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 3.0e-46 189.5 191 53.4
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 1.8e-43 180.3 111 75.7
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 9.0e-43 177.9 268 39.2
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 7.6e-42 174.9 184 53.3
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 2.1e-39 166.8 215 43.7
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.0e-38 164.5 214 44.4
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 3.0e-38 162.9 283 37.8
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 9.6e-37 157.9 289 38.8
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 8.7e-30 134.8 91 72.5
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 1.1e-29 134.4 87 74.7
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 7.4e-29 131.7 87 71.3
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 1.7e-25 120.6 205 39.5
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 1.9e-24 117.1 86 67.4
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.0e-22 109.8 87 63.2
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 9.1e-11 71.6 36 80.6


User provided reference genes

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