Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 8.3e-100 367.1 191 100.0
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.5e-43 179.5 195 53.3
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 5.5e-43 178.3 195 52.8
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 6.1e-42 174.9 198 52.0
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 1.6e-39 166.8 198 49.0
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 4.8e-39 165.2 185 51.9
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.9e-36 156.0 197 51.8
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.8e-36 155.6 201 47.3
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.8e-36 155.6 201 47.3
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 6.5e-36 154.8 211 49.3
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 8.5e-36 154.5 197 51.3
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.1e-35 154.1 103 73.8
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.9e-35 153.3 104 75.0
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.9e-35 153.3 192 47.9
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 3.2e-35 152.5 175 50.9
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 9.4e-35 151.0 197 47.2
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 1.2e-34 150.6 199 48.7
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.6e-34 150.2 185 45.9
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.6e-34 150.2 189 48.7
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 1.6e-34 150.2 193 46.1
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 2.1e-34 149.8 188 45.7
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 2.1e-34 149.8 188 44.1
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.7e-34 149.4 185 45.9
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 2.7e-34 149.4 193 48.2
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 3.6e-34 149.1 184 46.2
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 4.6e-34 148.7 100 74.0
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 4.6e-34 148.7 133 57.1
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 6.1e-34 148.3 118 62.7
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 7.9e-34 147.9 211 44.5
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 7.9e-34 147.9 169 53.8
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 1.0e-33 147.5 157 49.7
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.4e-33 147.1 168 53.0
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.4e-33 147.1 187 47.6
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 1.8e-33 146.7 206 44.7
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 2.3e-33 146.4 138 53.6
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 2.3e-33 146.4 198 46.5
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 3.0e-33 146.0 105 66.7
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.0e-33 146.0 185 44.9
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 3.0e-33 146.0 120 66.7
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 5.1e-33 145.2 124 58.9
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 5.1e-33 145.2 126 56.3
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.1e-33 145.2 125 58.4
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 5.1e-33 145.2 120 61.7
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 6.7e-33 144.8 200 44.0
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 8.8e-33 144.4 105 66.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 8.8e-33 144.4 185 47.6
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 8.8e-33 144.4 192 48.4
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 1.1e-32 144.1 186 47.8
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.1e-32 144.1 194 47.4
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.0e-32 143.3 187 44.9
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 2.6e-32 142.9 188 44.7
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 2.6e-32 142.9 111 63.1
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.6e-32 142.9 149 52.3
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 2.6e-32 142.9 185 47.0
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 3.3e-32 142.5 96 74.0
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 3.3e-32 142.5 185 48.1
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 5.7e-32 141.7 104 66.3
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 7.4e-32 141.4 181 47.5
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 7.4e-32 141.4 188 43.1
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 7.4e-32 141.4 190 45.3
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 9.7e-32 141.0 187 44.4
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 9.7e-32 141.0 183 45.9
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 2.2e-31 139.8 199 42.7
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 2.8e-31 139.4 188 43.6
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 3.7e-31 139.0 195 44.6
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 6.3e-31 138.3 96 71.9
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.1e-30 137.5 170 48.8
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.1e-30 137.5 198 42.4
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.8e-30 136.7 96 68.8
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.8e-30 136.7 116 62.1
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 2.4e-30 136.3 110 60.0
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 2.4e-30 136.3 86 72.1
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 3.1e-30 136.0 99 67.7
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 6.9e-30 134.8 188 42.6
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.0e-29 133.3 184 43.5
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 2.6e-29 132.9 114 57.9
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 2.6e-29 132.9 192 41.1
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 5.9e-29 131.7 184 42.9
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 1.0e-28 131.0 102 60.8
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 2.2e-28 129.8 148 52.7
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 2.2e-28 129.8 158 44.9
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 2.9e-28 129.4 190 40.5
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 5.0e-28 128.6 104 59.6
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 6.5e-28 128.3 121 47.9
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 8.5e-28 127.9 98 62.2
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.1e-27 127.5 103 57.3
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.4e-27 127.1 104 59.6
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 5.5e-27 125.2 93 64.5
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.6e-26 123.6 177 48.0
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 2.3e-25 119.8 126 50.0
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.2e-25 118.6 112 57.1
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 6.7e-25 118.2 209 38.8
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 4.4e-24 115.5 72 76.4
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.7e-23 113.6 172 41.3
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.1e-22 110.9 81 67.9
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 1.1e-22 110.9 78 67.9
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 3.1e-22 109.4 85 52.9
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 5.3e-22 108.6 106 50.9
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.2e-20 103.2 74 66.2
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 2.9e-20 102.8 85 58.8
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 5.0e-20 102.1 122 48.4
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-18 96.3 88 52.3
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 9.1e-14 81.3 59 66.1
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 3.0e-09 66.2 184 33.2
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 3.0e-09 66.2 32 93.8
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 2.6e-08 63.2 44 70.5
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 5.4e-06 55.5 98 35.7


User provided reference genes

Program Settings