Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.2e-155 553.1 285 100.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 6.4e-88 328.2 286 65.7
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.1e-86 323.2 275 64.0
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 2.3e-85 319.7 284 64.4
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 5.6e-84 315.1 291 61.9
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.5e-84 314.3 254 66.5
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.5e-84 314.3 254 66.5
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.2e-83 313.9 257 67.3
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 2.8e-83 312.8 275 62.2
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 8.1e-83 311.2 284 64.1
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.1e-82 310.8 245 67.8
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 8.9e-82 307.8 275 63.3
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 1.5e-81 307.0 287 60.6
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 2.0e-81 306.6 282 61.0
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 7.6e-81 304.7 267 62.9
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 7.6e-81 304.7 223 72.2
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 7.6e-81 304.7 289 58.8
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.4e-79 300.4 313 59.7
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 4.2e-79 298.9 275 62.9
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 5.4e-79 298.5 227 68.3
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.2e-78 297.4 285 61.1
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.7e-78 296.2 265 62.6
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.3e-77 293.9 247 65.6
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 5.1e-77 292.0 292 55.8
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 5.1e-77 292.0 291 57.4
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 6.6e-77 291.6 289 57.8
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 8.7e-77 291.2 248 64.1
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.5e-76 290.4 235 68.5
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.9e-76 290.0 292 55.8
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.5e-76 289.7 272 60.3
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 3.3e-76 289.3 267 59.9
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.6e-75 287.0 296 54.7
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 1.6e-75 287.0 222 70.3
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 1.8e-74 283.5 235 66.8
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 9.0e-74 281.2 292 54.1
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 9.0e-74 281.2 187 77.0
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 1.5e-73 280.4 285 52.6
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.4e-73 278.9 209 68.9
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 7.6e-73 278.1 182 75.3
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 1.7e-72 276.9 291 54.0
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.7e-72 276.9 182 78.0
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.7e-72 276.9 182 78.0
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 4.9e-72 275.4 281 54.8
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 6.4e-72 275.0 250 60.4
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 1.1e-71 274.2 284 55.6
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.4e-71 273.9 247 60.7
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 5.4e-71 271.9 272 57.0
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 7.1e-71 271.6 287 53.0
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.2e-70 270.8 284 53.9
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.2e-70 270.8 218 64.2
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.6e-70 270.4 207 68.6
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.0e-70 268.5 232 61.6
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 1.7e-69 266.9 225 62.7
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 3.0e-69 266.2 204 67.6
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 3.0e-69 266.2 273 54.6
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 3.0e-69 266.2 204 67.6
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 6.6e-69 265.0 273 54.9
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 8.7e-69 264.6 273 54.6
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 8.7e-69 264.6 213 65.7
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.1e-68 264.2 182 72.0
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.5e-68 263.1 232 60.8
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.5e-68 263.1 207 67.6
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 3.3e-68 262.7 227 61.7
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.6e-67 260.4 220 62.7
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.6e-67 260.4 238 58.4
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.6e-67 260.4 167 77.2
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.6e-67 260.4 207 67.1
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 2.8e-67 259.6 233 60.9
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 3.6e-67 259.2 187 70.6
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.1e-66 257.7 232 60.3
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.8e-66 256.9 212 64.6
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.8e-66 256.9 220 62.3
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 2.4e-66 256.5 241 57.7
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 3.1e-66 256.1 206 67.0
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.1e-66 256.1 305 51.5
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 2.0e-65 253.4 264 55.3
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.2e-64 250.0 215 63.7
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 3.8e-64 249.2 234 57.3
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 6.4e-64 248.4 249 59.0
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 3.2e-63 246.1 262 52.7
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 3.2e-63 246.1 167 74.9
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 4.2e-63 245.7 177 70.6
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.7e-62 243.0 187 64.7
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 4.6e-62 242.3 205 62.0
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 3.9e-61 239.2 204 63.2
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 3.9e-61 239.2 245 56.3
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 6.7e-61 238.4 235 60.4
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 8.7e-61 238.0 205 62.0
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 1.5e-60 237.3 167 68.3
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.5e-60 237.3 187 61.5
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 3.3e-60 236.1 214 60.7
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 4.3e-60 235.7 227 53.7
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 2.1e-59 233.4 230 54.8
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.7e-59 232.6 175 68.6
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.7e-59 232.6 207 58.9
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 5.8e-57 225.3 188 63.8
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 6.4e-56 221.9 210 55.7
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 2.5e-52 209.9 167 66.5
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 3.4e-49 199.5 235 50.6
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.9e-47 193.7 209 54.5
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 9.3e-47 191.4 135 74.1
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.2e-38 164.5 173 48.0
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 9.7e-36 154.8 195 43.6
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.2e-32 143.7 214 40.2
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 2.6e-25 120.2 211 37.0


User provided reference genes

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