Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 8.2e-103 377.1 196 100.0
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 7.1e-46 188.0 184 59.2
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 2.3e-44 183.0 200 54.5
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 3.3e-43 179.1 195 51.3
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 7.3e-43 177.9 192 55.7
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.3e-42 177.2 192 55.7
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 2.8e-42 176.0 192 53.6
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 2.8e-42 176.0 194 54.6
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.1e-41 174.1 199 52.3
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.8e-41 173.3 195 52.3
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 1.8e-41 173.3 193 53.4
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.8e-41 173.3 192 56.2
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 1.2e-40 170.6 196 50.0
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 5.8e-40 168.3 200 49.5
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.3e-39 167.2 195 52.8
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.7e-39 166.8 195 52.8
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 1.7e-39 166.8 183 53.0
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.2e-39 166.4 186 52.2
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 8.4e-39 164.5 195 50.3
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.1e-38 164.1 197 52.8
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 1.4e-38 163.7 194 51.0
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.9e-38 163.3 189 50.3
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 2.4e-38 162.9 198 49.5
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 5.4e-38 161.8 186 50.5
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 7.1e-38 161.4 184 49.5
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.2e-37 160.6 191 49.7
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 6.0e-37 158.3 190 48.9
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 7.9e-37 157.9 193 48.2
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 8.7e-36 154.5 188 46.8
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.5e-35 153.7 191 48.2
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 1.5e-35 153.7 184 49.5
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 3.3e-35 152.5 183 49.2
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 4.3e-35 152.1 191 47.6
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 5.6e-35 151.8 184 46.2
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 7.4e-35 151.4 195 48.7
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.3e-34 150.6 184 51.1
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 2.1e-34 149.8 199 50.3
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 3.7e-34 149.1 197 47.7
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 6.2e-34 148.3 183 50.3
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 8.1e-34 147.9 187 47.1
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 8.1e-34 147.9 181 47.0
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.1e-33 147.5 187 50.8
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 1.8e-33 146.7 182 46.2
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 1.8e-33 146.7 182 46.2
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 3.1e-33 146.0 185 49.7
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 3.1e-33 146.0 191 46.1
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 4.0e-33 145.6 185 48.1
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 4.0e-33 145.6 194 46.4
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 6.9e-33 144.8 192 45.3
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 9.0e-33 144.4 183 49.7
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 9.0e-33 144.4 181 46.4
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 1.5e-32 143.7 193 46.1
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.6e-32 142.9 190 46.3
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 5.8e-32 141.7 186 45.7
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 9.9e-32 141.0 184 47.8
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.3e-31 140.6 191 45.0
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.7e-31 140.2 183 46.4
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 2.2e-31 139.8 183 46.4
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 2.2e-31 139.8 185 49.2
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 2.2e-31 139.8 190 43.7
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.8e-31 139.0 197 45.7
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 6.4e-31 138.3 193 44.0
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 8.4e-31 137.9 185 44.3
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 8.4e-31 137.9 197 45.2
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 8.4e-31 137.9 197 45.2
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 8.4e-31 137.9 185 45.9
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.1e-30 137.5 183 45.9
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.1e-30 137.5 183 47.0
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.1e-30 137.5 183 45.9
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.1e-30 137.5 187 46.5
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.9e-30 136.7 196 47.4
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.9e-30 136.7 192 47.4
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 2.5e-30 136.3 191 45.5
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 3.2e-30 136.0 184 47.3
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 3.2e-30 136.0 191 45.5
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 7.1e-30 134.8 183 45.4
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 7.1e-30 134.8 191 45.5
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 9.3e-30 134.4 185 47.6
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 1.6e-29 133.7 184 47.8
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 2.1e-29 133.3 190 43.7
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 2.1e-29 133.3 185 45.4
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.5e-29 132.5 195 43.1
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.0e-28 131.0 196 45.4
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.8e-28 130.2 196 45.4
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 1.8e-28 130.2 186 47.3
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.3e-28 129.8 196 45.4
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 6.7e-28 128.3 191 43.5
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 6.7e-28 128.3 195 46.7
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 2.5e-27 126.3 184 45.7
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.3e-26 124.0 184 43.5
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 8.2e-26 121.3 183 43.7
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 5.3e-25 118.6 192 40.6
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 6.9e-25 118.2 216 39.4
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 9.0e-25 117.9 187 40.1
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.5e-24 117.1 184 39.7
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 2.6e-24 116.3 193 39.9
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 3.4e-24 115.9 189 38.6
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 4.5e-24 115.5 183 41.0
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 7.6e-24 114.8 185 42.7
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.0e-23 114.4 183 39.3
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 1.7e-23 113.6 186 41.4
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 2.2e-23 113.2 210 40.0
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.2e-23 113.2 184 41.8
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 2.9e-23 112.8 186 39.2
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 3.8e-23 112.5 183 38.8
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.4e-22 110.5 188 38.3
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.5e-22 109.8 134 47.8
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 9.3e-22 107.8 184 40.8
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 2.7e-21 106.3 190 40.0
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 2.7e-21 106.3 182 41.2
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 3.5e-21 105.9 191 36.6
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 3.5e-21 105.9 184 39.7
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 1.8e-20 103.6 182 39.0
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 1.8e-20 103.6 184 38.6
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 3.0e-20 102.8 190 38.9
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.5e-19 99.8 222 34.7
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 4.8e-18 95.5 182 39.0
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.8e-17 93.6 171 33.9
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 5.9e-16 88.6 165 37.6
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 6.5e-15 85.1 189 34.9
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.6e-13 80.5 118 43.2
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 1.0e-12 77.8 137 42.3
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 1.4e-12 77.4 78 52.6
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.1e-11 74.3 72 51.4
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.3e-10 70.9 50 68.0
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 6.3e-10 68.6 140 37.1
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.9e-09 65.1 50 62.0
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 1.2e-08 64.3 90 46.7
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.0e-08 63.5 53 54.7
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 5.0e-07 58.9 168 26.2
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 1.1e-06 57.8 182 25.8
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 5.5e-06 55.5 132 35.6
MBI07_g39476_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 5.5e-06 55.5 53 47.2
Nn8g38687 Nelumbo nucifera HOM05D046178 ORTHO05D006426 9.4e-06 54.7 71 47.9


User provided reference genes

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