Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 7.7e-124 447.2 232 100.0
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 2.8e-49 199.5 239 47.3
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 2.0e-47 193.4 233 48.9
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 7.6e-47 191.4 237 46.0
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 8.4e-46 188.0 235 47.7
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 1.4e-45 187.2 235 48.1
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 7.9e-44 181.4 238 42.0
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.8e-43 180.3 235 47.2
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 2.3e-43 179.9 238 41.2
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.0e-43 179.5 235 46.8
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 4.3e-42 175.6 239 41.8
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 1.5e-39 167.2 238 38.7
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 2.0e-39 166.8 234 41.0
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.0e-39 166.8 238 39.5
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 3.4e-39 166.0 238 38.7
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 5.8e-39 165.2 227 42.3
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 2.4e-37 159.8 196 48.0
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.7e-36 156.4 230 42.2
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 6.0e-36 155.2 236 41.5
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 6.0e-36 155.2 270 37.4
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.8e-35 153.7 235 43.0
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 3.0e-35 152.9 233 40.3
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 3.3e-34 149.4 235 42.1
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 7.4e-34 148.3 234 40.6
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.3e-33 147.5 210 43.8
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.3e-33 147.5 230 40.9
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.1e-32 144.4 242 39.3
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 9.0e-32 141.4 234 39.7
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 3.4e-31 139.4 217 40.1
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 2.9e-30 136.3 221 41.2
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 2.5e-29 133.3 175 46.3
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 2.5e-26 123.2 217 36.9
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 4.3e-26 122.5 152 45.4
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 5.7e-26 122.1 180 45.0
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 7.4e-26 121.7 155 48.4
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 7.4e-26 121.7 175 45.1
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.6e-25 120.6 186 37.6
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.8e-25 119.8 240 35.4
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 8.2e-25 118.2 236 38.6
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 1.1e-24 117.9 231 35.1
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.8e-24 117.1 186 44.1
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 5.3e-24 115.5 154 46.1
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.0e-22 111.3 203 34.5
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 3.8e-22 109.4 173 37.0
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 1.4e-21 107.5 182 41.2
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 7.2e-21 105.1 201 34.3
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 2.7e-20 103.2 223 36.8
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.4e-19 100.9 232 31.9
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 3.9e-19 99.4 232 31.5
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.5e-18 96.7 104 46.2
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 6.3e-17 92.0 233 32.2
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 1.4e-16 90.9 168 33.9
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 4.1e-16 89.4 179 35.8
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 6.9e-16 88.6 160 34.4
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 3.4e-15 86.3 100 45.0
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 1.3e-14 84.3 102 43.1
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.9e-13 80.5 112 39.3
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 9.4e-13 78.2 216 33.3
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 6.1e-12 75.5 155 36.8
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.4e-11 74.3 192 38.5
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 6.3e-09 65.5 178 25.3
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 1.1e-08 64.7 115 31.3
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 1.8e-08 63.9 112 40.2
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 7.0e-08 62.0 106 35.8


User provided reference genes

Program Settings