Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.8e-79 298.5 145 100.0
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 5.4e-35 151.4 130 60.8
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 3.0e-33 145.6 132 59.8
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.9e-32 142.9 138 56.5
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.3e-32 141.7 132 60.6
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 7.4e-32 141.0 133 56.4
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 1.3e-31 140.2 130 59.2
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.4e-30 136.7 129 55.0
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 3.1e-30 135.6 130 56.9
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 4.0e-30 135.2 131 56.5
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 4.0e-30 135.2 88 73.9
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 5.3e-30 134.8 135 60.0
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 9.0e-30 134.0 131 55.0
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.5e-29 133.3 88 73.9
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.5e-29 133.3 133 54.1
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 4.5e-29 131.7 90 72.2
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.3e-28 130.2 128 57.8
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 8.4e-28 127.5 132 54.5
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 1.4e-27 126.7 90 70.0
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.9e-27 126.3 128 55.5
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.9e-27 126.3 90 70.0
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 2.4e-27 125.9 96 65.6
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 3.2e-27 125.6 128 52.3
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 3.2e-27 125.6 133 51.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 3.2e-27 125.6 112 62.5
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 7.1e-27 124.4 136 55.9
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 7.1e-27 124.4 132 53.8
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 9.3e-27 124.0 124 57.3
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 1.2e-26 123.6 131 55.0
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.2e-26 123.6 132 53.0
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.2e-26 123.6 132 53.0
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.6e-26 123.2 123 53.7
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 2.1e-26 122.9 128 54.7
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 4.6e-26 121.7 132 50.0
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.6e-26 121.7 136 48.5
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 4.6e-26 121.7 136 48.5
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 6.0e-26 121.3 134 51.5
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 7.9e-26 120.9 129 52.7
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 1.8e-25 119.8 88 63.6
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 1.8e-25 119.8 133 54.1
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.0e-25 119.0 132 52.3
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 3.9e-25 118.6 141 48.9
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.5e-24 116.7 130 50.0
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 1.9e-24 116.3 137 48.9
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.9e-24 116.3 131 48.1
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 3.3e-24 115.5 130 51.5
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.3e-24 115.2 130 50.8
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 5.6e-24 114.8 87 65.5
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 5.6e-24 114.8 89 65.2
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 9.6e-24 114.0 136 50.0
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.7e-23 112.1 102 60.8
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 4.8e-23 111.7 91 62.6
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 6.2e-23 111.3 71 71.8
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 6.2e-23 111.3 131 48.9
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 1.1e-22 110.5 130 47.7
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.4e-22 110.2 107 58.9
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 3.1e-22 109.0 94 60.6
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 5.3e-22 108.2 143 42.7
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 1.2e-21 107.1 87 59.8
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 1.5e-21 106.7 85 57.6
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 2.0e-21 106.3 71 71.8
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 2.6e-21 105.9 82 61.0
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 3.4e-21 105.5 67 74.6
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 7.6e-21 104.4 109 55.0
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 1.3e-20 103.6 64 78.1
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 2.9e-20 102.4 119 47.9
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 2.9e-20 102.4 70 67.1
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 3.8e-20 102.1 63 77.8
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 3.8e-20 102.1 131 47.3
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 4.9e-20 101.7 118 47.5
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 6.5e-20 101.3 118 51.7
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 6.5e-20 101.3 61 80.3
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 8.4e-20 100.9 63 74.6
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 8.4e-20 100.9 63 76.2
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 8.4e-20 100.9 63 76.2
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 8.4e-20 100.9 63 76.2
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.1e-19 100.5 63 76.2
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.1e-19 100.5 63 76.2
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.1e-19 100.5 135 43.7
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.4e-19 100.1 70 65.7
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 2.5e-19 99.4 65 69.2
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 2.5e-19 99.4 97 52.6
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 3.2e-19 99.0 63 76.2
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 3.2e-19 99.0 97 52.6
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 3.2e-19 99.0 68 64.7
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 4.2e-19 98.6 97 52.6
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 5.5e-19 98.2 111 51.4
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 7.1e-19 97.8 61 75.4
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 9.3e-19 97.4 63 74.6
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 1.6e-18 96.7 68 66.2
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 2.1e-18 96.3 71 64.8
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 7.9e-18 94.4 69 63.8
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 1.3e-17 93.6 132 41.7
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 1.3e-17 93.6 74 62.2
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 2.3e-17 92.8 63 66.7
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 6.7e-17 91.3 123 43.9
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 8.7e-17 90.9 87 55.2
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.9e-16 89.7 73 58.9
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 2.5e-16 89.4 80 60.0
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 3.3e-16 89.0 114 45.6
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 4.3e-16 88.6 63 65.1
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 4.3e-16 88.6 63 65.1
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.3e-15 87.0 66 62.1
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.4e-13 79.0 65 60.0
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 5.0e-12 75.1 54 66.7
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 5.0e-12 75.1 53 62.3
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 6.5e-12 74.7 88 45.5
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.4e-06 57.0 36 75.0
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.4e-06 57.0 36 75.0


User provided reference genes

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