Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc107.64 Carica papaya HOM05D001607 ORTHO05D001893 5.9e-283 976.9 495 100.0
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 3.1e-191 672.2 760 50.3
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 3.5e-190 668.7 757 50.9
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 3.2e-188 662.1 756 50.0
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 1.2e-187 660.2 756 49.2
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.1e-187 659.4 750 49.5
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 3.6e-187 658.7 756 50.4
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.4e-186 656.8 750 49.3
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 6.8e-186 654.4 750 49.3
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 3.7e-184 648.7 751 49.4
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 4.8e-184 648.3 759 48.7
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 8.3e-184 647.5 753 49.0
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.4e-183 646.0 743 48.9
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.2e-182 643.7 760 48.0
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 7.7e-182 641.0 750 49.6
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 1.0e-181 640.6 750 48.7
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 8.6e-181 637.5 760 48.0
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.5e-180 636.0 757 47.8
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 2.5e-180 636.0 748 48.5
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.2e-180 635.6 758 48.2
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 3.2e-180 635.6 757 48.6
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 4.2e-180 635.2 763 48.0
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 1.2e-179 633.6 757 47.7
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.0e-179 630.9 761 47.7
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.0e-178 630.6 761 47.4
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.0e-178 630.6 757 47.4
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.0e-178 630.6 757 47.6
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.4e-178 630.2 757 47.4
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.5e-177 626.7 752 48.7
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 2.6e-177 625.9 750 48.1
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 4.4e-177 625.2 772 46.9
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 7.5e-177 624.4 772 46.8
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 1.3e-176 623.6 757 47.0
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 1.7e-176 623.2 775 45.5
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 1.1e-175 620.5 751 46.3
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 2.0e-174 616.3 758 47.0
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 4.5e-174 615.1 760 46.6
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 1.3e-173 613.6 752 46.1
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 1.7e-173 613.2 763 45.2
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 1.9e-172 609.8 760 46.6
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 9.5e-172 607.4 765 46.7
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 1.2e-171 607.1 752 45.5
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 1.2e-171 607.1 768 45.7
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 6.1e-171 604.7 706 48.4
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 8.0e-171 604.4 774 44.6
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 1.4e-170 603.6 753 47.3
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 3.0e-170 602.4 751 45.7
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 6.8e-170 601.3 754 46.2
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 7.5e-169 597.8 770 44.9
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 9.8e-169 597.4 758 45.0
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.3e-168 597.0 749 45.7
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 2.9e-168 595.9 750 44.9
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 3.7e-168 595.5 750 46.0
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 4.9e-168 595.1 762 45.7
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 3.2e-167 592.4 754 45.8
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 5.4e-167 591.7 746 45.8
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 5.4e-167 591.7 646 50.2
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 1.6e-166 590.1 746 45.0
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 2.7e-166 589.3 673 48.7
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 4.6e-166 588.6 757 44.5
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 4.6e-166 588.6 752 44.7
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 1.0e-165 587.4 759 44.8
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 1.7e-165 586.6 746 45.0
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 1.7e-165 586.6 746 45.4
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 3.0e-165 585.9 746 45.4
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 3.0e-165 585.9 746 45.4
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 3.0e-165 585.9 759 45.2
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.5e-164 583.6 752 45.3
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 1.9e-164 583.2 645 49.5
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 1.9e-164 583.2 751 45.9
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 9.5e-164 580.9 746 44.8
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 3.6e-163 578.9 753 45.2
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 3.6e-163 578.9 746 45.2
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 6.8e-162 574.7 727 45.1
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 8.9e-162 574.3 753 44.0
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 8.9e-162 574.3 752 43.8
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 1.2e-161 573.9 783 43.4
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.5e-161 573.5 752 44.8
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 2.0e-161 573.2 759 43.2
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 5.8e-161 571.6 746 44.5
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 9.8e-161 570.9 685 47.4
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 9.8e-161 570.9 754 44.6
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.3e-160 570.5 752 45.2
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.7e-160 570.1 751 43.0
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 4.9e-160 568.5 746 44.1
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 1.4e-159 567.0 756 44.3
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 5.4e-159 565.1 751 43.1
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 9.2e-159 564.3 746 43.0
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 1.2e-158 563.9 751 43.0
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.0e-158 563.1 654 48.6
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 2.0e-158 563.1 752 44.5
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 4.6e-158 562.0 746 43.2
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 4.6e-158 562.0 746 43.2
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 1.7e-157 560.1 742 45.6
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 2.3e-157 559.7 746 43.3
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 1.5e-156 557.0 755 43.0
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 3.3e-156 555.8 754 42.8
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 5.6e-156 555.1 752 42.0
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 3.6e-155 552.4 714 45.5
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 6.2e-155 551.6 756 42.5
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.2e-153 547.4 759 43.1
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 1.7e-152 543.5 762 42.5
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 2.9e-152 542.7 757 42.4
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 4.1e-151 538.9 717 43.8
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 1.2e-150 537.3 695 46.3
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 1.3e-149 533.9 746 40.3
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 1.7e-149 533.5 753 41.3
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 2.5e-148 529.6 749 42.5
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 5.6e-148 528.5 752 40.4
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 1.7e-144 516.9 748 40.4
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 3.9e-141 505.8 746 40.5
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 8.1e-139 498.0 750 39.5
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 7.6e-137 491.5 698 42.8
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 1.0e-125 454.5 642 42.7
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 1.8e-125 453.8 669 40.1
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 3.0e-117 426.4 684 39.0
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 9.6e-116 421.4 573 43.1
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 1.6e-110 404.1 942 32.4
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 3.9e-109 399.4 784 33.4
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 1.1e-106 391.3 228 76.3
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 3.8e-104 382.9 228 75.9
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 5.0e-104 382.5 774 32.8
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 3.6e-102 376.3 749 33.0
Gohir.D08G110708 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.3e-99 367.9 276 70.7
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 1.7e-99 367.5 810 31.7
Gorai.004G118400 Gossypium raimondii HOM05D001607 ORTHO05D001893 4.8e-99 365.9 274 70.8
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 1.4e-98 364.4 762 31.4
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 6.7e-93 345.5 229 66.4
CAN.G307.23 Capsicum annuum HOM05D001607 ORTHO05D001893 1.7e-91 340.9 268 67.9
arahy.Tifrunner.gnm1.ann1.7Y045D Arachis hypogaea HOM05D001607 ORTHO05D001893 3.7e-91 339.7 246 64.2
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 6.3e-91 339.0 206 75.7
Psat0s3405g0080 Pisum sativum HOM05D001607 ORTHO05D001893 1.2e-89 334.7 284 64.1
arahy.Tifrunner.gnm1.ann1.I8PQ41 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.7e-86 323.6 223 66.8
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 6.1e-86 322.4 224 62.9
Gohir.D08G110716 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.5e-79 301.2 171 77.2
SEGI_13029 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 5.5e-79 299.3 207 63.8
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 2.3e-77 293.9 652 32.4
Ca_27533_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 5.2e-77 292.7 244 64.8
Peaxi162Scf00444g00722 Petunia axillaris HOM05D001607 ORTHO05D001893 3.2e-71 273.5 214 66.4
Ca_05504_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 9.1e-66 255.4 164 68.9
Ca_05507_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 9.1e-66 255.4 164 68.9
arahy.Tifrunner.gnm1.ann1.L95KH7 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.5e-65 253.4 155 72.9
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 4.0e-61 240.0 282 47.5
Nitab4.5_0005845g0040 Nicotiana tabacum HOM05D001607 ORTHO05D001893 3.1e-58 230.3 181 66.3
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 1.1e-47 195.3 130 63.8
CDE08G1124 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 2.5e-47 194.1 181 59.1
Solyc03g025630.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 9.8e-44 182.2 142 66.2
Hund04843 Selenicereus undatus HOM05D001607 ORTHO05D001893 4.6e-41 173.3 142 62.0
unitig_46.g18793 Utricularia gibba HOM05D001607 ORTHO05D001893 1.7e-40 171.4 142 62.7
THA.LOC104818559 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 2.1e-38 164.5 103 71.8
Peaxi162Scf00444g00717 Petunia axillaris HOM05D001607 ORTHO05D001893 6.2e-38 162.9 97 74.2
CSS0019814 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.2e-36 158.7 126 62.7
CSS0024839 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.5e-36 158.3 92 73.9
vmacro06667 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 2.9e-35 154.1 110 69.1
QL09p013882 Quercus lobata HOM05D001607 ORTHO05D001893 2.4e-34 151.0 119 67.2
BcaNung05685 Brassica carinata HOM05D001607 ORTHO05D001893 5.1e-32 143.3 180 45.6
MD07G1272200 Malus domestica HOM05D001607 ORTHO05D001893 5.1e-32 143.3 102 71.6
Rhsim05G0128400 Rhododendron simsii HOM05D001607 ORTHO05D001893 5.1e-32 143.3 158 47.5
arahy.Tifrunner.gnm1.ann1.7UXB07 Arachis hypogaea HOM05D001607 ORTHO05D001893 6.2e-30 136.3 115 59.1
Nitab4.5_0003131g0040 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.1e-29 135.6 120 59.2
SEGI_36427 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 4.9e-27 126.7 148 48.6
arahy.Tifrunner.gnm1.ann1.B9FIPF Arachis hypogaea HOM05D001607 ORTHO05D001893 6.4e-27 126.3 110 59.1
Cre16.g675350 Chlamydomonas reinhardtii HOM05D001607 ORTHO05D001893 1.3e-24 118.6 279 30.8
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 4.3e-23 113.6 754 23.1
COL.COLO4_14279 Corchorus olitorius HOM05D000257 ORTHO05D009129 6.2e-14 83.2 53 69.8
TPR.G34952 Trifolium pratense HOM05D001607 ORTHO05D001893 1.4e-13 82.0 55 72.7
MELO3C034501.2 Cucumis melo HOM05D001607 ORTHO05D001893 3.1e-13 80.9 58 63.8
BcaNung07357 Brassica carinata HOM05D001607 ORTHO05D001893 5.3e-13 80.1 114 43.0
PGSC0003DMG400019983 Solanum tuberosum HOM05D001607 ORTHO05D000214 8.7e-08 62.8 189 27.0
SHI13772 Sapria himalayana HOM05D001607 ORTHO05D001893 7.4e-07 59.7 52 61.5
Glyma.09G137500 Glycine max HOM05D001607 ORTHO05D001893 1.6e-06 58.5 43 62.8
Pp3c2_32340 Physcomitrium patens HOM05D001607 ORTHO05D001893 2.1e-06 58.2 76 40.8
RhsimUnG0162600 Rhododendron simsii HOM05D002175 ORTHO05D002303 8.1e-06 56.2 98 38.8


User provided reference genes

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