Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 1.7e-307 1058.5 551 100.0
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 1.5e-194 683.3 551 66.4
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 8.3e-193 677.6 576 64.4
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 1.3e-190 670.2 550 64.0
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.6e-186 656.0 548 61.7
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 9.2e-184 647.5 551 63.9
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 3.5e-183 645.6 551 63.5
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.0e-182 644.0 551 63.3
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 1.6e-180 636.7 551 60.3
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 2.1e-180 636.3 553 61.1
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 8.1e-180 634.4 550 61.6
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 5.2e-179 631.7 551 62.8
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 6.4e-177 624.8 553 59.5
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 2.3e-174 616.3 533 62.5
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 1.8e-171 606.7 552 58.9
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 6.8e-171 604.7 556 59.0
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 3.4e-170 602.4 548 58.9
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 4.9e-169 598.6 549 59.0
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 1.7e-166 590.1 530 59.1
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 6.6e-166 588.2 550 58.9
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 1.5e-165 587.0 550 58.7
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 1.7e-161 573.5 553 56.2
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 1.7e-161 573.5 552 56.9
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 3.8e-161 572.4 550 54.4
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 4.9e-161 572.0 548 56.2
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.6e-159 567.0 563 55.1
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 2.7e-159 566.2 533 59.3
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 3.9e-158 562.4 556 56.3
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 9.6e-157 557.8 566 52.1
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 4.8e-156 555.4 577 54.4
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.4e-155 553.9 551 56.1
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 1.2e-154 550.8 553 54.4
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 7.9e-151 538.1 552 55.8
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 1.3e-150 537.3 555 51.9
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 3.0e-150 536.2 551 54.8
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 3.9e-150 535.8 557 54.2
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 5.1e-150 535.4 552 52.7
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 8.7e-150 534.6 552 53.1
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 4.3e-149 532.3 551 50.3
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 3.1e-147 526.2 552 52.7
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.7e-145 520.4 558 51.1
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 3.2e-144 516.2 555 53.2
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 4.2e-144 515.8 555 52.1
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 5.5e-144 515.4 610 47.7
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 7.1e-144 515.0 555 52.8
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 1.2e-143 514.2 560 51.6
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.6e-143 513.8 561 51.3
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 1.6e-143 513.8 555 52.3
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 2.7e-143 513.1 553 52.6
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 1.3e-142 510.8 561 51.0
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 6.7e-142 508.4 561 51.0
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.9e-141 506.9 561 50.8
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.3e-141 505.8 563 50.3
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 7.4e-141 505.0 548 51.5
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 1.6e-140 503.8 551 51.0
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 4.8e-140 502.3 524 54.2
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 1.1e-139 501.1 459 57.7
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.1e-139 501.1 568 50.4
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 4.0e-139 499.2 555 50.8
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 5.3e-139 498.8 570 49.1
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 2.6e-138 496.5 553 50.8
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 5.8e-138 495.4 558 49.1
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 5.8e-138 495.4 553 50.6
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.1e-136 491.1 558 48.9
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.9e-136 490.3 582 48.8
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.5e-136 490.0 550 49.8
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 9.3e-136 488.0 557 50.4
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 2.7e-135 486.5 679 44.9
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 2.7e-135 486.5 552 49.3
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 7.9e-135 485.0 550 50.4
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 2.3e-134 483.4 559 48.5
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 5.1e-134 482.3 560 49.1
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.3e-132 477.6 551 49.5
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 5.3e-131 472.2 558 47.5
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 5.3e-131 472.2 558 47.5
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 6.9e-131 471.9 558 48.2
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 1.2e-130 471.1 558 47.3
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 2.6e-130 469.9 546 47.1
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 2.6e-130 469.9 549 46.4
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 2.2e-129 466.8 558 48.7
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.9e-128 463.8 556 47.3
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 3.2e-128 463.0 555 47.2
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 2.1e-127 460.3 548 48.0
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 6.1e-127 458.8 553 47.4
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 7.9e-127 458.4 551 47.5
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.0e-126 458.0 556 47.8
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 1.3e-126 457.6 558 47.3
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 2.3e-126 456.8 555 47.0
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 3.9e-126 456.1 555 47.0
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 5.1e-126 455.7 573 46.6
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 5.1e-126 455.7 556 46.9
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 6.7e-126 455.3 558 47.1
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 1.9e-125 453.8 570 46.7
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.5e-125 453.4 561 46.9
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 3.1e-123 446.4 559 45.1
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 6.5e-121 438.7 528 47.3
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 1.1e-120 438.0 507 50.1
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 2.3e-118 430.3 555 44.9
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 3.0e-118 429.9 459 52.3
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 4.8e-116 422.5 384 57.6
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 6.3e-116 422.2 550 45.8
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.8e-115 420.6 571 44.1
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 1.6e-111 407.5 552 43.3
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 6.1e-111 405.6 383 55.4
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 9.7e-109 398.3 438 51.1
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 3.7e-108 396.4 549 43.5
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 8.2e-108 395.2 549 43.0
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 2.2e-105 387.1 559 41.9
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 2.5e-104 383.6 581 41.3
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 1.5e-101 374.4 553 42.5
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 1.8e-99 367.5 578 41.9
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 2.7e-98 363.6 331 56.5
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 1.3e-97 361.3 578 39.1
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.7e-95 353.6 482 44.8
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 1.8e-94 350.9 585 37.4
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 2.3e-94 350.5 279 67.4
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 7.5e-93 345.5 389 50.9
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 5.0e-89 332.8 552 39.7
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 6.8e-86 322.4 554 37.7
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.0e-81 308.5 345 49.9
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 2.8e-79 300.4 337 49.6
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 9.8e-77 292.0 278 59.0
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 8.0e-71 272.3 220 63.2
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.6e-63 248.1 464 37.3
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.8e-62 244.6 516 35.7
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 6.8e-62 242.7 274 51.1
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.7e-60 238.0 257 51.4
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 2.5e-56 224.2 377 37.4
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 4.0e-46 190.3 318 40.3
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 2.6e-45 187.6 174 56.3
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 1.9e-40 171.4 340 36.2
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 1.8e-38 164.9 679 25.6
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 4.0e-38 163.7 190 45.8
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 4.5e-37 160.2 154 50.6
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 1.7e-36 158.3 154 50.6
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 7.1e-35 152.9 251 39.4
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 7.1e-35 152.9 144 53.5
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 2.7e-34 151.0 149 49.0
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 7.9e-34 149.4 214 41.1
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 2.6e-29 134.4 203 37.9
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 4.5e-29 133.7 194 43.3
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 4.9e-28 130.2 170 48.2
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 2.1e-23 114.8 193 32.6
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 7.6e-21 106.3 141 39.7
AL5G14400 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 3.2e-19 100.9 270 31.9
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 1.0e-17 95.9 372 26.9
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 7.7e-13 79.7 227 30.0
CBR_g26425 Chara braunii HOM05D004671 ORTHO05D005638 4.3e-08 63.9 98 35.7
arahy.Tifrunner.gnm1.ann1.674JY7 Arachis hypogaea HOM05D004671 ORTHO05D038832 1.4e-06 58.9 90 37.8


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