Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.5e-71 272.7 135 100.0
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.1e-45 186.8 119 74.8
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.4e-45 186.4 129 68.2
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 2.7e-44 182.2 121 74.4
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 3.5e-44 181.8 120 72.5
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 4.6e-44 181.4 134 67.9
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 4.6e-44 181.4 120 72.5
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 4.6e-44 181.4 119 73.9
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 4.6e-44 181.4 119 73.9
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 6.0e-44 181.0 120 71.7
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 2.3e-43 179.1 118 70.3
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 6.6e-43 177.6 122 71.3
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.1e-42 176.8 118 71.2
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 1.5e-42 176.4 118 71.2
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.9e-42 176.0 118 68.6
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.9e-42 176.0 118 69.5
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 4.3e-42 174.9 118 70.3
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 5.6e-42 174.5 146 61.0
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 5.6e-42 174.5 119 68.9
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 7.3e-42 174.1 134 65.7
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.2e-41 173.3 116 68.1
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 1.2e-41 173.3 117 70.1
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.6e-41 172.9 117 70.1
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 1.6e-41 172.9 116 69.8
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 2.8e-41 172.2 120 70.8
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 3.6e-41 171.8 117 70.9
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 4.7e-41 171.4 122 68.9
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 6.2e-41 171.0 118 70.3
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 6.2e-41 171.0 127 65.4
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 6.2e-41 171.0 118 68.6
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 8.1e-41 170.6 119 69.7
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 8.1e-41 170.6 118 69.5
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 8.1e-41 170.6 124 68.5
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-40 170.2 135 63.0
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.4e-40 169.9 118 68.6
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.8e-40 169.5 118 65.3
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.8e-40 169.5 127 66.1
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.3e-40 169.1 118 66.1
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.3e-40 169.1 118 68.6
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 3.1e-40 168.7 120 69.2
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 4.0e-40 168.3 125 66.4
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.2e-40 167.9 118 67.8
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 5.2e-40 167.9 120 68.3
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.2e-39 166.8 118 66.1
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.2e-39 166.8 118 67.8
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.5e-39 166.4 120 68.3
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 2.0e-39 166.0 127 63.0
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 2.0e-39 166.0 121 64.5
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 2.6e-39 165.6 120 67.5
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 2.6e-39 165.6 116 65.5
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 4.4e-39 164.9 128 60.9
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 4.4e-39 164.9 122 66.4
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 4.4e-39 164.9 136 63.2
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 5.8e-39 164.5 145 58.6
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 5.8e-39 164.5 125 64.0
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 7.6e-39 164.1 121 65.3
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 9.9e-39 163.7 137 62.8
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.3e-38 163.3 118 66.1
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.7e-38 162.9 128 63.3
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 2.9e-38 162.2 120 65.8
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 2.9e-38 162.2 119 64.7
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 2.9e-38 162.2 118 66.9
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 2.9e-38 162.2 118 66.1
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.9e-38 161.4 118 66.1
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.9e-38 161.4 118 68.6
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.1e-37 160.2 130 60.8
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.9e-37 159.5 118 65.3
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 2.4e-37 159.1 126 66.7
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.4e-37 159.1 118 67.8
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 7.1e-37 157.5 127 63.0
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 7.1e-37 157.5 127 63.0
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 9.2e-37 157.1 123 61.8
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 9.2e-37 157.1 124 63.7
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.2e-36 156.8 118 65.3
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-36 156.4 122 61.5
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 2.1e-36 156.0 120 65.8
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 2.1e-36 156.0 120 64.2
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 2.7e-36 155.6 118 62.7
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.5e-36 155.2 118 65.3
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 3.5e-36 155.2 118 63.6
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 3.5e-36 155.2 127 61.4
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 4.6e-36 154.8 120 62.5
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 7.8e-36 154.1 120 64.2
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.0e-35 153.7 118 62.7
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 1.7e-35 152.9 118 62.7
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 3.9e-35 151.8 118 60.2
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 3.9e-35 151.8 123 61.8
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 6.6e-35 151.0 120 64.2
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 6.6e-35 151.0 120 64.2
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 6.6e-35 151.0 120 62.5
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.5e-34 149.8 127 59.8
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.5e-34 149.8 129 55.0
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 4.3e-34 148.3 127 59.1
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 5.6e-34 147.9 146 54.8
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 7.3e-34 147.5 130 55.4
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.6e-33 146.4 120 62.5
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 8.1e-33 144.1 117 61.5
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.2e-31 140.2 128 54.7
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 7.6e-31 137.5 150 48.0
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.9e-30 135.6 121 58.7
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.8e-30 135.2 118 57.6
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 4.2e-29 131.7 126 57.9
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.4e-29 131.3 118 56.8
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 6.6e-27 124.4 86 69.8
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 2.1e-25 119.4 119 52.9
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 6.2e-25 117.9 125 49.6
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 8.1e-25 117.5 128 50.0
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.3e-19 100.1 64 71.9
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.9e-18 96.3 68 70.6
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.8e-17 92.4 125 39.2
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 9.0e-16 87.4 57 70.2
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 7.1e-13 77.8 115 40.0
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.6e-12 76.6 52 65.4
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.6e-12 76.6 88 47.7
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 2.8e-09 65.9 107 37.4


User provided reference genes

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