Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1063.1 Carica papaya HOM05D000098 ORTHO05D001077 2.9e-23 110.9 52 100.0
Cpa.g.sc1425.1 Carica papaya HOM05D000098 ORTHO05D001077 1.2e-19 99.0 52 86.5
Cpa.g.sc41.96 Carica papaya HOM05D000098 ORTHO05D001077 1.2e-19 99.0 52 86.5
COL.COLO4_09088 Corchorus olitorius HOM05D000098 ORTHO05D001077 3.1e-09 64.3 48 56.2
TWI75G0456 Tripterygium wilfordii HOM05D000098 ORTHO05D001077 9.1e-09 62.8 52 55.8
COL.COLO4_08567 Corchorus olitorius HOM05D000098 ORTHO05D024984 1.2e-08 62.4 49 59.2
COL.COLO4_09087 Corchorus olitorius HOM05D000098 ORTHO05D001077 1.6e-08 62.0 47 57.4
Ciclev10017505m.g Citrus clementina HOM05D000098 ORTHO05D001077 2.7e-08 61.2 49 63.3
Ciclev10018199m.g Citrus clementina HOM05D000098 ORTHO05D001077 2.7e-08 61.2 49 63.3
Ciclev10018211m.g Citrus clementina HOM05D000098 ORTHO05D001077 2.7e-08 61.2 49 63.3
Ciclev10018221m.g Citrus clementina HOM05D000098 ORTHO05D001077 2.7e-08 61.2 49 63.3
TWI12G0191 Tripterygium wilfordii HOM05D002497 ORTHO05D002697 2.7e-08 61.2 50 46.0
Sabra02G0123500 Salix brachista HOM05D000098 ORTHO05D001077 3.5e-08 60.8 50 56.0
Migut.D00301 Erythranthe guttata HOM05D000098 ORTHO05D001077 4.5e-08 60.5 50 60.0
Sabra02G0124000 Salix brachista HOM05D000098 ORTHO05D001077 5.9e-08 60.1 50 56.0
Sabra15G0102200 Salix brachista HOM05D000098 ORTHO05D001077 5.9e-08 60.1 45 55.6
TWI38G1605 Tripterygium wilfordii HOM05D000098 ORTHO05D001077 5.9e-08 60.1 43 60.5
COL.COLO4_08310 Corchorus olitorius HOM05D000098 ORTHO05D001077 1.0e-07 59.3 50 56.0
Potri.002G161300 Populus trichocarpa HOM05D000098 ORTHO05D001077 1.7e-07 58.5 45 55.6
Carub.0004s1240 Capsella rubella HOM05D000098 ORTHO05D001077 2.2e-07 58.2 46 58.7
arahy.Tifrunner.gnm1.ann1.A0FJA9 Arachis hypogaea HOM05D000098 ORTHO05D001077 2.9e-07 57.8 50 50.0
arahy.Tifrunner.gnm1.ann1.CWCN1E Arachis hypogaea HOM05D000098 ORTHO05D001077 2.9e-07 57.8 50 50.0
Dinv34759 Davidia involucrata HOM05D000098 ORTHO05D001077 2.9e-07 57.8 54 44.4
Gohir.A11G123000 Gossypium hirsutum HOM05D000098 ORTHO05D001077 3.8e-07 57.4 45 55.6
Gohir.D11G128300 Gossypium hirsutum HOM05D000098 ORTHO05D001077 3.8e-07 57.4 45 55.6
Lj5g0000772 Lotus japonicus HOM05D000098 ORTHO05D001077 3.8e-07 57.4 50 54.0
COL.COLO4_38061 Corchorus olitorius HOM05D000098 ORTHO05D001077 5.0e-07 57.0 50 56.0
Dinv32929 Davidia involucrata HOM05D000098 ORTHO05D001077 5.0e-07 57.0 45 48.9
Potri.001G268700 Populus trichocarpa HOM05D000098 ORTHO05D001077 5.0e-07 57.0 45 55.6
Potri.002G156100 Populus trichocarpa HOM05D000098 ORTHO05D001077 5.0e-07 57.0 45 55.6
Potri.002G156401 Populus trichocarpa HOM05D000098 ORTHO05D001077 5.0e-07 57.0 45 55.6
Sabra16G0054000 Salix brachista HOM05D000098 ORTHO05D001077 5.0e-07 57.0 43 55.8
TWI12G1328 Tripterygium wilfordii HOM05D000098 ORTHO05D001077 5.0e-07 57.0 52 50.0
TWI75G0853 Tripterygium wilfordii HOM05D000098 ORTHO05D001077 5.0e-07 57.0 50 48.0
Potri.006G259000 Populus trichocarpa HOM05D000098 ORTHO05D001077 6.5e-07 56.6 53 56.6
Sabra16G0054500 Salix brachista HOM05D000098 ORTHO05D001077 6.5e-07 56.6 45 53.3
Gorai.007G137200 Gossypium raimondii HOM05D000098 ORTHO05D001077 8.5e-07 56.2 49 57.1
Prupe.1G156200 Prunus persica HOM05D000098 ORTHO05D001077 8.5e-07 56.2 54 50.0
THA.LOC104800849 Tarenaya hassleriana HOM05D000098 ORTHO05D001077 8.5e-07 56.2 50 54.0
BcaB04g19737 Brassica carinata HOM05D000098 ORTHO05D001077 1.1e-06 55.8 47 55.3
CSS0018614 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001077 1.1e-06 55.8 50 48.0
CSS0031051 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001077 1.1e-06 55.8 50 48.0
Duzib211G0253 Durio zibethinus HOM05D000098 ORTHO05D001077 1.1e-06 55.8 48 50.0
Oeu047873.1 Olea europaea HOM05D000098 ORTHO05D001077 1.1e-06 55.8 43 58.1
SalBow4G1221 Salvia bowleyana HOM05D000098 ORTHO05D001077 1.1e-06 55.8 51 49.0
TWI75G0397 Tripterygium wilfordii HOM05D000098 ORTHO05D001077 1.1e-06 55.8 43 55.8
TWI75G1636 Tripterygium wilfordii HOM05D000098 ORTHO05D001077 1.1e-06 55.8 52 50.0
BcaC04g23614 Brassica carinata HOM05D000098 ORTHO05D001077 1.5e-06 55.5 47 53.2
A09p05870 Brassica napus HOM05D000098 ORTHO05D001077 1.5e-06 55.5 47 53.2
C09p06450 Brassica napus HOM05D000098 ORTHO05D001077 1.5e-06 55.5 47 53.2
BolC9t53567H Brassica oleracea HOM05D000098 ORTHO05D001077 1.5e-06 55.5 47 53.2
BraA09t36229Z Brassica rapa HOM05D000098 ORTHO05D001077 1.5e-06 55.5 47 53.2
FvH4_5g19880 Fragaria vesca HOM05D000098 ORTHO05D001077 1.5e-06 55.5 33 63.6
FAN04G1331 Fragaria x ananassa HOM05D000098 ORTHO05D001077 1.5e-06 55.5 33 63.6
Potri.006G259101 Populus trichocarpa HOM05D000098 ORTHO05D001077 1.5e-06 55.5 52 51.9
SalBow5G2857 Salvia bowleyana HOM05D000098 ORTHO05D001077 1.5e-06 55.5 52 50.0
BcaB06g28498 Brassica carinata HOM05D000098 ORTHO05D001077 1.9e-06 55.1 47 57.4
BolC4t27544H Brassica oleracea HOM05D000098 ORTHO05D001077 1.9e-06 55.1 47 57.4
Carub.0004s1227 Capsella rubella HOM05D000098 ORTHO05D001077 1.9e-06 55.1 47 55.3
FAN08G1225 Fragaria x ananassa HOM05D000098 ORTHO05D001077 1.9e-06 55.1 33 63.6
Lalb_Chr02g0142751 Lupinus albus HOM05D000098 ORTHO05D001077 1.9e-06 55.1 50 54.0
Prupe.7G082100 Prunus persica HOM05D000098 ORTHO05D001077 1.9e-06 55.1 48 52.1
Ciclev10018285m.g Citrus clementina HOM05D000098 ORTHO05D001077 2.5e-06 54.7 49 57.1
Gohir.D08G075400 Gossypium hirsutum HOM05D000098 ORTHO05D001077 2.5e-06 54.7 50 46.0
Gorai.004G079700 Gossypium raimondii HOM05D000098 ORTHO05D001077 2.5e-06 54.7 50 46.0
Thecc.06G031300 Theobroma cacao HOM05D000098 ORTHO05D001077 2.5e-06 54.7 51 51.0
GSVIVG01017936001 Vitis vinifera HOM05D000098 ORTHO05D001077 2.5e-06 54.7 53 50.9
CARHR187070 Cardamine hirsuta HOM05D000098 ORTHO05D001077 3.2e-06 54.3 37 62.2
Duzib192G0245 Durio zibethinus HOM05D000098 ORTHO05D001077 3.2e-06 54.3 54 48.1
Lj1A46G46 Lonicera japonica HOM05D000098 ORTHO05D001077 3.2e-06 54.3 50 46.0
Nitab4.5_0003374g0040 Nicotiana tabacum HOM05D000098 ORTHO05D000523 3.2e-06 54.3 51 47.1
Peaxi162Scf00641g00058 Petunia axillaris HOM05D000098 ORTHO05D001077 3.2e-06 54.3 52 48.1
TWI36G1455 Tripterygium wilfordii HOM05D000098 ORTHO05D001077 3.2e-06 54.3 52 48.1
FAN13G2084 Fragaria x ananassa HOM05D000098 ORTHO05D001077 4.2e-06 53.9 33 60.6
Nitab4.5_0009374g0010 Nicotiana tabacum HOM05D000098 ORTHO05D000523 4.2e-06 53.9 51 47.1
SGA_v2.0_scaffold265G46101 Striga asiatica HOM05D000098 ORTHO05D001077 4.2e-06 53.9 56 48.2
Thecc.01G278400 Theobroma cacao HOM05D000098 ORTHO05D001077 4.2e-06 53.9 50 52.0
BcaC03g17859 Brassica carinata HOM05D000098 ORTHO05D001077 5.5e-06 53.5 47 53.2
BolC2t11956H Brassica oleracea HOM05D000098 ORTHO05D001077 5.5e-06 53.5 47 53.2
Cpa.g.sc2.257 Carica papaya HOM05D000098 ORTHO05D001077 5.5e-06 53.5 47 55.3
Potri.003G047300 Populus trichocarpa HOM05D000098 ORTHO05D001077 5.5e-06 53.5 45 51.1
Sabra06G0202500 Salix brachista HOM05D000098 ORTHO05D001077 5.5e-06 53.5 46 56.5
Thecc.01G278200 Theobroma cacao HOM05D000098 ORTHO05D001077 5.5e-06 53.5 45 51.1
arahy.Tifrunner.gnm1.ann1.AY9ABC Arachis hypogaea HOM05D000098 ORTHO05D001077 7.2e-06 53.1 54 50.0
FvH4_6g29420 Fragaria vesca HOM05D000098 ORTHO05D001077 7.2e-06 53.1 33 60.6
FAN05G4856 Fragaria x ananassa HOM05D000098 ORTHO05D001077 7.2e-06 53.1 33 60.6
FAN09G2750 Fragaria x ananassa HOM05D000098 ORTHO05D001077 7.2e-06 53.1 33 60.6
PSO170G0960 Papaver somniferum HOM05D000098 ORTHO05D001077 7.2e-06 53.1 54 46.3
SalBow5G1349 Salvia bowleyana HOM05D000098 ORTHO05D001077 7.2e-06 53.1 52 50.0
THA.LOC104818776 Tarenaya hassleriana HOM05D000098 ORTHO05D001077 7.2e-06 53.1 52 48.1
arahy.Tifrunner.gnm1.ann1.5LRS2Q Arachis hypogaea HOM05D000098 ORTHO05D001077 9.5e-06 52.8 54 50.0
BcaB06g28497 Brassica carinata HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BcaB06g28499 Brassica carinata HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BcaB06g28500 Brassica carinata HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BcaB06g28501 Brassica carinata HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BcaB06g28502 Brassica carinata HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BcaB06g28503 Brassica carinata HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BcaB06g28504 Brassica carinata HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
C04p60440 Brassica napus HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
C04p60450 Brassica napus HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
C04p60460 Brassica napus HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
C04p60480 Brassica napus HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
C04p60490 Brassica napus HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
C04p60500 Brassica napus HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BolC4t27543H Brassica oleracea HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BolC4t27545H Brassica oleracea HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BolC4t27546H Brassica oleracea HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BolC4t27547H Brassica oleracea HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BolC4t27549H Brassica oleracea HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
BolC4t27550H Brassica oleracea HOM05D000098 ORTHO05D001077 9.5e-06 52.8 47 55.3
FAN18G1578 Fragaria x ananassa HOM05D000098 ORTHO05D001077 9.5e-06 52.8 62 40.3
MD14G1053900 Malus domestica HOM05D000098 ORTHO05D001077 9.5e-06 52.8 45 53.3
Prupe.4G207100 Prunus persica HOM05D000098 ORTHO05D001077 9.5e-06 52.8 45 46.7
Prupe.4G207400 Prunus persica HOM05D000098 ORTHO05D001077 9.5e-06 52.8 48 41.7
vmacro14918 Vaccinium macrocarpon HOM05D000098 ORTHO05D001077 9.5e-06 52.8 55 43.6


User provided reference genes

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