Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc106.30 Carica papaya HOM05D004087 ORTHO05D004787 7.2e-102 374.0 202 100.0
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 1.7e-18 97.1 137 58.4
CSS0031122 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 3.5e-16 89.4 121 53.7
Sed0019763 Sechium edule HOM05D004087 ORTHO05D004787 4.6e-16 89.0 142 48.6
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 7.9e-16 88.2 112 58.9
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 7.9e-16 88.2 114 61.4
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 7.9e-16 88.2 123 52.8
THA.LOC104807209 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 7.9e-16 88.2 89 57.3
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 1.0e-15 87.8 137 54.7
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 1.8e-15 87.0 139 51.1
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 2.3e-15 86.7 138 52.9
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 3.0e-15 86.3 91 67.0
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 5.1e-15 85.5 96 61.5
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 6.7e-15 85.1 92 63.0
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 6.7e-15 85.1 81 70.4
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 1.9e-14 83.6 138 50.0
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 1.9e-14 83.6 145 53.8
ClCG02G007130 Citrullus lanatus HOM05D004087 ORTHO05D004787 2.5e-14 83.2 143 49.0
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 2.5e-14 83.2 92 63.0
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 3.3e-14 82.8 134 51.5
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 4.3e-14 82.4 94 61.7
A01p04540 Brassica napus HOM05D004087 ORTHO05D004787 4.3e-14 82.4 135 51.9
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 4.3e-14 82.4 135 52.6
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 5.7e-14 82.0 93 61.3
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 5.7e-14 82.0 137 51.8
DCAR_021942 Daucus carota HOM05D004087 ORTHO05D004787 7.4e-14 81.6 137 52.6
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 1.3e-13 80.9 90 54.4
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 1.3e-13 80.9 87 66.7
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 1.3e-13 80.9 124 50.8
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 1.6e-13 80.5 137 51.1
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 2.1e-13 80.1 91 62.6
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 2.1e-13 80.1 91 62.6
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 3.7e-13 79.3 137 48.9
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 3.7e-13 79.3 127 48.8
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 3.7e-13 79.3 107 46.7
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 4.8e-13 79.0 114 49.1
EL10Ac9g22175 Beta vulgaris HOM05D004087 ORTHO05D004787 8.2e-13 78.2 94 59.6
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 8.2e-13 78.2 140 50.0
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 1.1e-12 77.8 90 62.2
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 1.1e-12 77.8 90 62.2
Ah.01g007120 Amaranthus hybridus HOM05D004087 ORTHO05D004787 1.4e-12 77.4 103 56.3
Sabra16G0181200 Salix brachista HOM05D004087 ORTHO05D004787 1.4e-12 77.4 102 58.8
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 1.8e-12 77.0 139 48.2
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 2.4e-12 76.6 93 62.4
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 2.4e-12 76.6 93 62.4
CsaV3_7G007690 Cucumis sativus L. HOM05D004087 ORTHO05D004787 3.1e-12 76.3 140 47.1
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 4.1e-12 75.9 144 48.6
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 5.3e-12 75.5 140 47.9
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 5.3e-12 75.5 139 48.9
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 6.9e-12 75.1 144 48.6
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 9.0e-12 74.7 140 44.3
Nitab4.5_0000772g0090 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.5e-11 73.9 112 52.7
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 2.0e-11 73.6 97 49.5
Lj5A221T58 Lonicera japonica HOM05D004087 ORTHO05D004787 2.6e-11 73.2 130 49.2
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 3.4e-11 72.8 145 49.0
PGSC0003DMG400025835 Solanum tuberosum HOM05D004087 ORTHO05D004787 4.5e-11 72.4 106 53.8
Nitab4.5_0009103g0030 Nicotiana tabacum HOM05D004087 ORTHO05D004787 5.8e-11 72.0 95 58.9
VMungo1215G2093 Vigna mungo HOM05D004087 ORTHO05D004787 5.8e-11 72.0 95 51.6
MELO3C018531.2 Cucumis melo HOM05D004087 ORTHO05D004787 7.6e-11 71.6 141 46.8
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 7.6e-11 71.6 147 47.6
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 7.6e-11 71.6 109 55.0
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 1.3e-10 70.9 148 50.0
MD10G1111500 Malus domestica HOM05D004087 ORTHO05D004787 1.3e-10 70.9 144 47.9
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.7e-10 70.5 147 49.7
Peaxi162Scf00016g03121 Petunia axillaris HOM05D004087 ORTHO05D004787 2.2e-10 70.1 112 50.9
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 3.8e-10 69.3 85 58.8
PGR042G2373 Punica granatum HOM05D004087 ORTHO05D004787 3.8e-10 69.3 113 44.2
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 3.8e-10 69.3 145 43.4
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 3.8e-10 69.3 111 54.1
Haze_10292 Corylus avellana HOM05D004087 ORTHO05D004787 5.0e-10 68.9 124 51.6
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 5.0e-10 68.9 91 56.0
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 6.5e-10 68.6 131 48.1
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 8.4e-10 68.2 135 48.9
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 1.1e-09 67.8 64 73.4
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 1.4e-09 67.4 73 53.4
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 1.9e-09 67.0 146 46.6
Phvul.002G050600 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 5.5e-09 65.5 115 46.1
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 9.3e-09 64.7 141 42.6
BolC2t07908H Brassica oleracea HOM05D004087 ORTHO05D004787 1.6e-08 63.9 60 75.0
CDE04G2047 Ceratophyllum demersum HOM05D004087 ORTHO05D004787 2.1e-08 63.5 89 52.8
BcaC03g14363 Brassica carinata HOM05D004087 ORTHO05D004787 2.7e-08 63.2 60 73.3
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 3.5e-08 62.8 144 45.1
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 4.6e-08 62.4 37 86.5
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 4.6e-08 62.4 137 45.3
Lsat_1_v5_gn_9_118200 Lactuca sativa HOM05D004087 ORTHO05D004787 4.6e-08 62.4 88 59.1
C02p17780 Brassica napus HOM05D004087 ORTHO05D004787 6.1e-08 62.0 37 81.1
Lsat_1_v5_gn_3_112521 Lactuca sativa HOM05D004087 ORTHO05D004787 7.9e-08 61.6 99 53.5
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 1.0e-07 61.2 37 78.4
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 1.0e-07 61.2 69 66.7
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 3.0e-07 59.7 141 44.0
Cc02_g20080 Coffea canephora HOM05D004087 ORTHO05D004787 5.1e-07 58.9 82 57.3
Gohir.A13G047950 Gossypium hirsutum HOM05D004087 ORTHO05D004787 5.1e-07 58.9 87 47.1
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 2.5e-06 56.6 81 54.3
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 4.3e-06 55.8 71 40.8
unitig_0.g632 Utricularia gibba HOM05D004087 ORTHO05D004787 9.7e-06 54.7 75 52.0


User provided reference genes

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