Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 3.9e-212 741.1 354 100.0
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 3.7e-162 575.1 354 76.0
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.0e-159 567.0 359 75.2
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.4e-156 556.6 348 76.4
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 2.3e-156 555.8 349 76.5
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.0e-155 552.7 348 75.9
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 2.4e-153 545.8 355 75.8
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 5.4e-153 544.7 349 74.8
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 3.0e-151 538.9 354 73.4
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 3.9e-151 538.5 350 74.0
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 7.3e-150 534.3 346 73.7
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 7.3e-150 534.3 349 73.4
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.6e-149 533.1 346 73.4
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.6e-149 533.1 342 73.7
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 3.6e-149 531.9 354 72.6
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.8e-148 529.6 348 72.7
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 6.8e-148 527.7 341 74.2
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 8.9e-148 527.3 348 72.4
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.8e-147 524.6 348 72.1
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 3.7e-146 521.9 341 73.3
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 4.9e-146 521.5 354 70.9
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 1.1e-145 520.4 350 71.7
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 4.1e-145 518.5 353 70.0
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 6.0e-144 514.6 353 70.3
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.7e-143 513.1 354 68.4
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 3.9e-143 511.9 353 69.7
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.5e-142 507.3 354 67.5
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 1.2e-141 506.9 354 69.5
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 2.1e-141 506.1 351 70.1
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.1e-141 506.1 354 67.8
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.1e-141 506.1 354 67.8
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 2.8e-141 505.8 354 68.6
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.7e-141 505.0 354 67.2
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 8.1e-141 504.2 350 69.7
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.8e-140 503.1 354 67.2
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.8e-140 503.1 354 67.2
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.0e-140 501.9 354 66.9
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 8.9e-140 500.7 350 68.0
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.5e-139 500.0 344 68.6
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 1.5e-139 500.0 354 68.4
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 2.0e-139 499.6 353 67.4
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 3.4e-139 498.8 347 68.0
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 4.4e-139 498.4 354 67.5
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 5.8e-139 498.0 354 67.5
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 5.8e-139 498.0 354 67.2
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 7.6e-139 497.7 354 67.5
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 9.9e-139 497.3 354 68.1
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 2.2e-138 496.1 349 68.2
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.9e-138 495.7 347 68.3
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 3.8e-138 495.4 348 67.2
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 3.8e-138 495.4 348 67.2
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.9e-137 493.0 349 67.9
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 2.4e-137 492.7 376 64.6
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 2.4e-137 492.7 354 68.1
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.2e-137 492.3 355 66.2
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 5.4e-137 491.5 344 67.4
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.6e-136 490.0 376 64.4
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.6e-136 490.0 349 67.6
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 2.1e-136 489.6 344 68.0
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 3.5e-136 488.8 347 67.4
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 3.5e-136 488.8 355 65.9
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 4.6e-136 488.4 356 66.3
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 6.0e-136 488.0 339 68.1
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 2.3e-135 486.1 348 65.2
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 3.9e-135 485.3 350 66.3
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 5.1e-135 485.0 343 67.6
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 4.3e-134 481.9 355 66.2
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 9.6e-134 480.7 353 66.3
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.6e-133 479.9 355 66.5
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 6.2e-133 478.0 305 74.4
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 8.1e-133 477.6 339 65.8
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.1e-132 477.2 351 68.1
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.4e-132 476.9 339 66.1
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 4.0e-132 475.3 354 65.3
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 9.0e-132 474.2 350 66.0
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 9.0e-132 474.2 337 67.4
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 1.5e-131 473.4 353 64.0
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.5e-131 473.4 339 66.4
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.0e-131 473.0 337 65.9
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.6e-131 472.6 354 65.3
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 4.4e-131 471.9 343 65.3
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 4.4e-131 471.9 344 64.5
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 1.7e-130 469.9 357 62.2
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 2.2e-130 469.5 351 64.1
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 6.4e-130 468.0 353 64.6
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 6.4e-130 468.0 343 66.2
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.1e-129 467.2 349 65.9
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 1.9e-129 466.5 355 63.4
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 9.3e-129 464.2 358 62.8
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.6e-128 463.4 351 64.4
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 2.1e-128 463.0 357 61.1
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 2.7e-128 462.6 354 64.1
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 3.3e-126 455.7 363 61.4
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 2.6e-123 446.0 284 73.9
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 4.9e-122 441.8 348 60.6
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 5.1e-119 431.8 348 58.6
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 8.7e-119 431.0 349 58.7
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 5.8e-115 418.3 339 60.5
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 4.9e-106 388.7 348 59.5
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 5.5e-105 385.2 258 69.4
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 6.3e-101 371.7 351 55.3
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.2e-91 340.9 340 48.8
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.1e-89 334.3 359 47.1
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 6.5e-82 308.5 295 50.8
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 5.5e-81 305.4 300 50.7
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 2.2e-77 293.5 311 47.9
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 4.1e-76 289.3 371 41.8
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 2.6e-54 216.9 388 33.5
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 4.4e-54 216.1 535 28.4
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.8e-39 167.5 298 33.2
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 7.0e-36 155.6 370 28.1
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 9.5e-25 118.6 122 50.8
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.2e-19 101.7 65 70.8
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.2e-19 101.7 65 70.8
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 6.6e-18 95.9 65 67.7


User provided reference genes

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