Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc104.42 Carica papaya HOM05D009874 ORTHO05D010825 1.4e-226 789.3 393 100.0
Cpa.g.sc104.43 Carica papaya HOM05D009874 ORTHO05D010825 2.3e-51 207.2 217 54.8
Thecc.05G103100 Theobroma cacao HOM05D009874 ORTHO05D010825 2.4e-45 187.2 175 52.0
Gorai.002G235700 Gossypium raimondii HOM05D009874 ORTHO05D010825 3.0e-43 180.3 175 49.1
Gohir.D01G191800 Gossypium hirsutum HOM05D009874 ORTHO05D010825 3.9e-43 179.9 175 49.1
COL.COLO4_29585 Corchorus olitorius HOM05D009874 ORTHO05D010825 5.6e-42 176.0 175 47.4
Gohir.A01G201900 Gossypium hirsutum HOM05D009874 ORTHO05D010825 1.8e-40 171.0 175 48.0
Potri.016G071100 Populus trichocarpa HOM05D009874 ORTHO05D010825 4.4e-39 166.4 175 46.3
Gorai.007G048400 Gossypium raimondii HOM05D009874 ORTHO05D010825 3.2e-37 160.2 177 44.6
Gohir.D11G045050 Gossypium hirsutum HOM05D009874 ORTHO05D010825 9.6e-26 122.1 177 38.4
FvH4_6g20210 Fragaria vesca HOM05D009874 ORTHO05D010825 3.4e-23 113.6 168 35.7
FAN14G2012 Fragaria x ananassa HOM05D009874 ORTHO05D010825 7.6e-23 112.5 169 34.9
RcHm_v2.0_Chr3g0475751 Rosa chinensis HOM05D009874 ORTHO05D010825 4.9e-22 109.8 168 33.3
FAN05G0496 Fragaria x ananassa HOM05D009874 ORTHO05D010825 6.4e-22 109.4 168 33.9
FAN05G5202 Fragaria x ananassa HOM05D009874 ORTHO05D010825 1.4e-21 108.2 168 33.9
Haze_08137 Corylus avellana HOM05D009874 ORTHO05D010825 4.3e-18 96.7 166 34.3
Prupe.7G096800 Prunus persica HOM05D009874 ORTHO05D010825 9.6e-18 95.5 166 31.9
Haze_08138 Corylus avellana HOM05D009874 ORTHO05D010825 1.6e-17 94.7 165 33.3
Cfa012524 Carpinus fangiana HOM05D009874 ORTHO05D010825 2.8e-17 94.0 166 33.1
MD12G1039000 Malus domestica HOM05D009874 ORTHO05D010825 4.0e-16 90.1 149 33.6
Gorai.009G325100 Gossypium raimondii HOM05D009874 ORTHO05D010825 9.0e-16 89.0 93 46.2
Cfa012525 Carpinus fangiana HOM05D009874 ORTHO05D010825 2.6e-15 87.4 161 32.3
QL12p001338 Quercus lobata HOM05D009874 ORTHO05D010825 7.6e-15 85.9 171 31.0
FAN09G4754 Fragaria x ananassa HOM05D010052 ORTHO05D010666 7.9e-12 75.9 173 32.4
FvH4_6g24970 Fragaria vesca HOM05D010052 ORTHO05D010666 3.9e-11 73.6 173 31.8
MD07G1151300 Malus domestica HOM05D010052 ORTHO05D010666 2.5e-10 70.9 176 30.1
Eucgr.A02595 Eucalyptus grandis HOM05D008136 ORTHO05D002052 4.3e-10 70.1 168 28.0
FAN14G1910 Fragaria x ananassa HOM05D010052 ORTHO05D010666 7.4e-10 69.3 175 31.4
MD12G1087900 Malus domestica HOM05D010052 ORTHO05D010666 7.4e-10 69.3 174 28.2
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 4.8e-09 66.6 176 27.3
Atru.chr8.1376 Acer truncatum HOM05D015120 ORTHO05D010666 1.4e-08 65.1 185 26.5
Thecc.01G085100 Theobroma cacao HOM05D015120 ORTHO05D010666 1.8e-08 64.7 132 31.8
Prupe.7G096500 Prunus persica HOM05D010052 ORTHO05D010666 6.9e-08 62.8 175 26.9
QL12p000905 Quercus lobata HOM05D030319 ORTHO05D024879 9.0e-08 62.4 172 28.5
MD12G1039100 Malus domestica HOM05D010052 ORTHO05D010666 2.6e-07 60.8 173 27.2
TAR633G1301 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.6e-07 59.3 166 25.3
Ciclev10013330m.g Citrus clementina HOM05D015120 ORTHO05D010666 1.3e-06 58.5 161 28.0
COL.COLO4_17013 Corchorus olitorius HOM05D009874 ORTHO05D010825 2.2e-06 57.8 156 28.8
VMungo1383G0805 Vigna mungo HOM05D017388 ORTHO05D010666 2.2e-06 57.8 177 27.7
Duzib093G0447 Durio zibethinus HOM05D008136 ORTHO05D002052 2.9e-06 57.4 167 25.7
Gorai.011G109200 Gossypium raimondii HOM05D015120 ORTHO05D010666 3.8e-06 57.0 131 28.2
BcaB01g00366 Brassica carinata HOM05D008136 ORTHO05D002052 4.9e-06 56.6 168 28.6
Gohir.D10G099500 Gossypium hirsutum HOM05D015120 ORTHO05D010666 4.9e-06 56.6 131 28.2
COL.COLO4_32398 Corchorus olitorius HOM05D010991 ORTHO05D010825 6.5e-06 56.2 168 25.6
Gohir.A10G088400 Gossypium hirsutum HOM05D015120 ORTHO05D010666 6.5e-06 56.2 131 28.2
Psat3g029040 Pisum sativum HOM05D017388 ORTHO05D010666 8.4e-06 55.8 179 25.1


User provided reference genes

Program Settings