Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 6.1e-149 530.8 268 100.0
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 1.4e-39 167.5 276 43.5
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 2.6e-38 163.3 273 42.9
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 3.2e-33 146.4 274 39.4
Manes.09G044800 Manihot esculenta HOM05D009231 ORTHO05D010800 5.5e-33 145.6 275 39.3
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 4.7e-32 142.5 274 39.1
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 2.3e-31 140.2 274 40.1
Manes.08G032900 Manihot esculenta HOM05D009231 ORTHO05D010800 4.8e-29 132.5 272 38.6
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 5.3e-28 129.0 271 38.4
Potri.006G203800 Populus trichocarpa HOM05D009231 ORTHO05D010800 4.5e-27 125.9 268 39.9
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 5.9e-27 125.6 273 35.9
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 2.2e-26 123.6 265 32.5
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 5.5e-25 119.0 199 42.7
COL.COLO4_29583 Corchorus olitorius HOM05D009231 ORTHO05D010800 9.4e-25 118.2 158 46.8
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 8.0e-24 115.2 287 34.5
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 2.3e-23 113.6 290 33.4
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 2.3e-23 113.6 282 34.8
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 6.8e-23 112.1 266 35.0
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 1.2e-22 111.3 301 32.9
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 1.5e-22 110.9 264 34.1
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 4.4e-22 109.4 271 33.9
Dinv31754 Davidia involucrata HOM05D009231 ORTHO05D010800 5.0e-18 95.9 179 38.0
Nn2g14291 Nelumbo nucifera HOM05D009231 ORTHO05D010800 8.6e-18 95.1 191 39.8
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 5.5e-17 92.4 196 34.7
RcHm_v2.0_Chr3g0475841 Rosa chinensis HOM05D015804 ORTHO05D010800 1.2e-14 84.7 272 29.0
Duzib106G2060 Durio zibethinus HOM05D009231 ORTHO05D010800 1.5e-14 84.3 140 38.6
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 3.2e-12 76.6 206 33.5
PGR142G1154 Punica granatum HOM05D009231 ORTHO05D010800 7.8e-11 72.0 270 30.7
Sabra06G0157100 Salix brachista HOM05D009231 ORTHO05D010800 2.9e-10 70.1 271 30.3
Sp4g18200 Schrenkiella parvula HOM05D020906 ORTHO05D021169 6.6e-10 68.9 264 28.8
CDE08G0923 Ceratophyllum demersum HOM05D009231 ORTHO05D010800 8.6e-10 68.6 269 29.4
Sc20g0006710 Simmondsia chinensis HOM05D009231 ORTHO05D010800 4.3e-09 66.2 272 28.3
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 9.5e-09 65.1 232 30.2
Hund03818 Selenicereus undatus HOM05D009231 ORTHO05D010800 1.4e-07 61.2 281 28.5
SGA_v2.0_scaffold31G12845 Striga asiatica HOM05D051180 ORTHO05D045288 1.8e-07 60.8 200 29.5
AL4G32060 Arabidopsis lyrata HOM05D020906 ORTHO05D021169 4.0e-07 59.7 147 32.0
AT2G35950 Arabidopsis thaliana HOM05D020906 ORTHO05D021169 4.0e-07 59.7 147 33.3
CiPaw.14G034700 Carya illinoinensis HOM05D024410 ORTHO05D024910 6.8e-07 58.9 270 25.6
Nitab4.5_0002958g0010 Nicotiana tabacum HOM05D019826 ORTHO05D022411 6.8e-07 58.9 225 33.3
Carub.0004s1770 Capsella rubella HOM05D020906 ORTHO05D021169 8.9e-07 58.5 247 27.5
ATR0772G209 Amborella trichopoda HOM05D009231 ORTHO05D010800 4.4e-06 56.2 294 27.9


User provided reference genes

Program Settings