Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 1.3e-46 189.5 105 100.0
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 4.5e-31 137.9 94 72.3
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 2.9e-30 135.2 72 87.5
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 3.8e-30 134.8 75 82.7
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 3.8e-30 134.8 75 82.7
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 3.8e-30 134.8 75 84.0
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 3.8e-30 134.8 97 70.1
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 5.0e-30 134.4 103 66.0
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 8.5e-30 133.7 103 67.0
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 8.5e-30 133.7 72 84.7
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 4.2e-29 131.3 74 82.4
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 4.2e-29 131.3 76 81.6
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 4.2e-29 131.3 73 83.6
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 4.2e-29 131.3 101 68.3
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 5.5e-29 131.0 72 80.6
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 5.5e-29 131.0 74 83.8
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 9.4e-29 130.2 72 81.9
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 9.4e-29 130.2 106 64.2
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 9.4e-29 130.2 74 81.1
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 9.4e-29 130.2 100 63.0
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 1.2e-28 129.8 72 80.6
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 2.1e-28 129.0 74 81.1
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 2.1e-28 129.0 72 80.6
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 2.1e-28 129.0 95 65.3
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 2.1e-28 129.0 99 64.6
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 2.1e-28 129.0 97 63.9
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 2.1e-28 129.0 72 83.3
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 2.7e-28 128.6 75 77.3
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 2.7e-28 128.6 107 59.8
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.7e-28 128.6 73 80.8
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 2.7e-28 128.6 74 79.7
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 3.6e-28 128.3 72 77.8
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 3.6e-28 128.3 73 80.8
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 3.6e-28 128.3 102 63.7
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 3.6e-28 128.3 72 79.2
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 4.7e-28 127.9 74 78.4
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 6.1e-28 127.5 74 78.4
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 6.1e-28 127.5 74 78.4
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 6.1e-28 127.5 74 78.4
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 6.1e-28 127.5 74 79.7
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 8.0e-28 127.1 71 80.3
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 8.0e-28 127.1 99 63.6
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 8.0e-28 127.1 100 64.0
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 8.0e-28 127.1 74 79.7
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 1.0e-27 126.7 98 63.3
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 1.0e-27 126.7 98 63.3
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 1.0e-27 126.7 71 83.1
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.0e-27 126.7 73 80.8
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 1.0e-27 126.7 72 77.8
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 1.4e-27 126.3 74 77.0
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 1.8e-27 125.9 74 75.7
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 1.8e-27 125.9 74 75.7
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 1.8e-27 125.9 72 77.8
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 1.8e-27 125.9 75 74.7
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.8e-27 125.9 72 81.9
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 1.8e-27 125.9 92 69.6
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 1.8e-27 125.9 76 77.6
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 2.3e-27 125.6 98 63.3
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 2.3e-27 125.6 98 63.3
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 3.0e-27 125.2 72 80.6
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 3.0e-27 125.2 100 63.0
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 4.0e-27 124.8 74 75.7
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 4.0e-27 124.8 74 75.7
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 4.0e-27 124.8 98 63.3
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 4.0e-27 124.8 71 78.9
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 4.0e-27 124.8 99 60.6
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 5.2e-27 124.4 73 76.7
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 5.2e-27 124.4 72 77.8
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 6.7e-27 124.0 70 81.4
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 6.7e-27 124.0 70 81.4
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 6.7e-27 124.0 72 76.4
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 6.7e-27 124.0 101 61.4
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 8.8e-27 123.6 72 77.8
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 1.1e-26 123.2 72 76.4
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 1.1e-26 123.2 109 58.7
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 1.5e-26 122.9 72 77.8
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 1.5e-26 122.9 87 69.0
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 1.5e-26 122.9 69 78.3
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 3.3e-26 121.7 72 76.4
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 3.3e-26 121.7 95 66.3
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 5.7e-26 120.9 69 79.7
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 9.7e-26 120.2 90 63.3
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.3e-25 119.8 86 67.4
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.7e-25 119.4 96 62.5
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 3.7e-25 118.2 72 70.8
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 6.3e-25 117.5 71 74.6
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.4e-24 116.3 88 65.9
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 1.8e-24 115.9 96 60.4
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 2.4e-24 115.5 85 64.7
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.1e-24 115.2 73 75.3
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 9.1e-24 113.6 72 68.1
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 2.7e-23 112.1 74 64.9
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 3.5e-23 111.7 102 52.0
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 1.7e-22 109.4 73 67.1
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 4.2e-21 104.8 109 52.3
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 1.2e-20 103.2 70 58.6
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 1.2e-20 103.2 63 77.8
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 6.1e-20 100.9 69 60.9
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 1.4e-19 99.8 75 62.7
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.5e-18 96.3 56 75.0
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 1.5e-18 96.3 59 74.6
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 9.8e-18 93.6 68 60.3
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 1.1e-16 90.1 64 57.8
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 4.1e-16 88.2 69 52.2
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 5.4e-16 87.8 87 54.0
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 5.7e-10 67.8 39 82.1
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 6.3e-09 64.3 38 65.8
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 1.8e-08 62.8 38 78.9
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 2.4e-08 62.4 36 72.2
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 2.4e-08 62.4 39 69.2
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 4.5e-07 58.2 32 84.4
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 1.0e-06 57.0 38 71.1
Gorai.006G118000 Gossypium raimondii HOM05D007267 ORTHO05D009053 2.9e-06 55.5 41 65.9
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 2.9e-06 55.5 39 69.2


User provided reference genes

Program Settings