Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc103.29 Carica papaya HOM05D001091 ORTHO05D015841 4.1e-75 284.6 145 100.0
Thecc.09G267800 Theobroma cacao HOM05D001091 ORTHO05D001020 1.9e-51 206.1 164 68.9
COL.COLO4_00161 Corchorus olitorius HOM05D001091 ORTHO05D001020 7.1e-51 204.1 162 67.9
Duzib150G0688 Durio zibethinus HOM05D001091 ORTHO05D001020 3.5e-50 201.8 159 66.7
Duzib168G0067 Durio zibethinus HOM05D001091 ORTHO05D001020 1.0e-49 200.3 158 67.7
Atru.chr3.3075 Acer truncatum HOM05D001091 ORTHO05D001020 2.5e-48 195.7 152 66.4
Atru.chr3.3090 Acer truncatum HOM05D001091 ORTHO05D009271 2.5e-48 195.7 152 66.4
Gorai.006G117900 Gossypium raimondii HOM05D001091 ORTHO05D001020 3.6e-47 191.8 169 63.3
Gohir.D09G100500 Gossypium hirsutum HOM05D001091 ORTHO05D001020 1.1e-46 190.3 168 63.1
Gohir.A09G101100 Gossypium hirsutum HOM05D001091 ORTHO05D001020 5.2e-46 188.0 169 62.1
MD11G1174900 Malus domestica HOM05D001091 ORTHO05D001020 2.6e-45 185.7 157 61.1
Sabra16G0128400 Salix brachista HOM05D001091 ORTHO05D001020 3.4e-45 185.3 158 63.3
Potri.001G214800 Populus trichocarpa HOM05D001091 ORTHO05D001020 3.8e-44 181.8 158 62.0
Ciclev10027791m.g Citrus clementina HOM05D001091 ORTHO05D001020 6.4e-44 181.0 170 59.4
MD03G1159600 Malus domestica HOM05D001091 ORTHO05D001020 6.4e-44 181.0 157 58.6
RcHm_v2.0_Chr5g0049121 Rosa chinensis HOM05D001091 ORTHO05D001020 2.4e-43 179.1 158 59.5
Prupe.6G147300 Prunus persica HOM05D001091 ORTHO05D001020 4.2e-43 178.3 157 56.7
Manes.11G103600 Manihot esculenta HOM05D001091 ORTHO05D001020 7.1e-43 177.6 158 61.4
ClCG02G022500 Citrullus lanatus HOM05D001091 ORTHO05D001020 2.1e-42 176.0 160 56.2
TWI31G0595 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 7.8e-42 174.1 166 56.6
vmacro04051 Vaccinium macrocarpon HOM05D001091 ORTHO05D001020 7.8e-42 174.1 169 58.0
Rhsim13G0198100 Rhododendron simsii HOM05D001091 ORTHO05D001020 1.0e-41 173.7 170 58.2
MELO3C014526.2 Cucumis melo HOM05D001091 ORTHO05D001020 2.3e-41 172.6 160 54.4
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 2.3e-41 172.6 157 59.9
TWI79G0355 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 2.3e-41 172.6 166 56.0
Hma1.2p1_0101F.1_g049670 Hydrangea macrophylla HOM05D001091 ORTHO05D001020 8.7e-41 170.6 164 56.1
CsaV3_6G038640 Cucumis sativus L. HOM05D001091 ORTHO05D001020 1.5e-40 169.9 160 54.4
FAN11G0955 Fragaria x ananassa HOM05D001091 ORTHO05D001020 3.3e-40 168.7 161 56.5
Phvul.005G117700 Phaseolus vulgaris HOM05D001091 ORTHO05D001020 1.6e-39 166.4 160 55.0
FvH4_3g26140 Fragaria vesca HOM05D001091 ORTHO05D001020 2.1e-39 166.0 161 55.9
Glyma.12G190400 Glycine max HOM05D001091 ORTHO05D001020 4.8e-39 164.9 161 55.3
Lj2C949G1 Lonicera japonica HOM05D001091 ORTHO05D001020 1.4e-38 163.3 164 57.3
GSVIVG01037531001 Vitis vinifera HOM05D001091 ORTHO05D001020 1.4e-38 163.3 160 55.0
Glyma.13G311300 Glycine max HOM05D001091 ORTHO05D001020 3.1e-38 162.2 156 54.5
FAN21G3893 Fragaria x ananassa HOM05D001091 ORTHO05D001020 4.0e-38 161.8 161 55.3
Sed0022355 Sechium edule HOM05D001091 ORTHO05D001020 4.0e-38 161.8 158 52.5
FAN25G1894 Fragaria x ananassa HOM05D001091 ORTHO05D001020 6.9e-38 161.0 161 55.3
Thhalv10012650m.g Eutrema salsugineum HOM05D001091 ORTHO05D001020 9.0e-38 160.6 157 56.7
VMungo1080G0672 Vigna mungo HOM05D001091 ORTHO05D001020 9.0e-38 160.6 162 52.5
FAN16G2369 Fragaria x ananassa HOM05D001091 ORTHO05D001020 2.0e-37 159.5 161 54.7
Cfa010206 Carpinus fangiana HOM05D001091 ORTHO05D001020 3.4e-37 158.7 159 54.1
AL6G32990 Arabidopsis lyrata HOM05D001091 ORTHO05D001020 9.9e-37 157.1 157 55.4
CSS0046714 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D015841 1.3e-36 156.8 164 53.7
Sp6g23160 Schrenkiella parvula HOM05D001091 ORTHO05D001020 2.2e-36 156.0 157 56.1
arahy.Tifrunner.gnm1.ann1.RIT83U Arachis hypogaea HOM05D001091 ORTHO05D001020 3.8e-36 155.2 157 51.6
arahy.Tifrunner.gnm1.ann1.X1RCBJ Arachis hypogaea HOM05D001091 ORTHO05D001020 3.8e-36 155.2 157 51.6
CARHR191500 Cardamine hirsuta HOM05D001091 ORTHO05D001020 3.8e-36 155.2 157 54.8
THA.LOC104799571 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 4.9e-36 154.8 157 55.4
A10p18710 Brassica napus HOM05D001091 ORTHO05D001020 1.1e-35 153.7 156 55.8
C09p54650 Brassica napus HOM05D001091 ORTHO05D001020 1.1e-35 153.7 156 55.8
TAR633G1177 Trochodendron aralioides HOM05D001091 ORTHO05D001020 1.1e-35 153.7 155 54.2
Nn6g34617 Nelumbo nucifera HOM05D001091 ORTHO05D001020 1.4e-35 153.3 158 53.2
QL01p019208 Quercus lobata HOM05D001091 ORTHO05D015841 2.4e-35 152.5 173 51.4
CiPaw.13G126800 Carya illinoinensis HOM05D001091 ORTHO05D001020 3.2e-35 152.1 160 52.5
PGR119G1581 Punica granatum HOM05D001091 ORTHO05D001020 4.2e-35 151.8 161 50.9
Psat5g262560 Pisum sativum HOM05D001091 ORTHO05D001020 5.4e-35 151.4 160 51.2
BcaB08g36457 Brassica carinata HOM05D001091 ORTHO05D001020 2.1e-34 149.4 156 53.8
Carub.0006s1967 Capsella rubella HOM05D001091 ORTHO05D001020 2.1e-34 149.4 157 53.5
Eucgr.J00586 Eucalyptus grandis HOM05D001091 ORTHO05D001020 2.7e-34 149.1 164 52.4
Lj3g0006295 Lotus japonicus HOM05D001091 ORTHO05D001020 7.9e-34 147.5 164 50.0
Aa31LG1G13370 Aethionema arabicum HOM05D001091 ORTHO05D001020 2.3e-33 146.0 159 52.2
Haze_23594 Corylus avellana HOM05D001091 ORTHO05D001020 2.3e-33 146.0 215 43.7
Ca_01624_v3 Cicer arietinum L. HOM05D001091 ORTHO05D001020 5.1e-33 144.8 160 49.4
Nitab4.5_0000875g0120 Nicotiana tabacum HOM05D001091 ORTHO05D001020 6.7e-33 144.4 164 51.8
Lalb_Chr19g0136151 Lupinus albus HOM05D001091 ORTHO05D001020 1.5e-32 143.3 157 49.7
TPR.G4164 Trifolium pratense HOM05D001091 ORTHO05D001020 1.5e-32 143.3 162 50.6
arahy.Tifrunner.gnm1.ann1.ZKTD7I Arachis hypogaea HOM05D001091 ORTHO05D001020 3.3e-32 142.1 146 50.0
arahy.Tifrunner.gnm1.ann1.KRDC8H Arachis hypogaea HOM05D001091 ORTHO05D001020 4.3e-32 141.7 159 48.4
Lalb_Chr01g0005811 Lupinus albus HOM05D001091 ORTHO05D001020 9.6e-32 140.6 157 50.3
Medtr2g087710 Medicago truncatula HOM05D001091 ORTHO05D001020 9.6e-32 140.6 163 49.1
Nitab4.5_0003657g0030 Nicotiana tabacum HOM05D001091 ORTHO05D001020 9.6e-32 140.6 164 50.6
A03p10540 Brassica napus HOM05D001091 ORTHO05D001020 2.1e-31 139.4 158 51.3
EL10Ac7g16275 Beta vulgaris HOM05D001091 ORTHO05D001020 2.8e-31 139.0 160 47.5
C03p12130 Brassica napus HOM05D001091 ORTHO05D001020 2.8e-31 139.0 158 50.6
BolC9t58330H Brassica oleracea HOM05D001091 ORTHO05D001020 4.8e-31 138.3 196 44.4
BraA10t43951Z Brassica rapa HOM05D001091 ORTHO05D001020 6.2e-31 137.9 197 44.2
Solyc06g073930.4 Solanum lycopersicum HOM05D001091 ORTHO05D001020 1.1e-30 137.1 162 51.9
Sopen06g030330 Solanum pennellii HOM05D001091 ORTHO05D001020 1.1e-30 137.1 162 51.9
CAN.G1463.15 Capsicum annuum HOM05D001091 ORTHO05D001020 1.8e-30 136.3 165 49.7
Dinv18857 Davidia involucrata HOM05D001091 ORTHO05D001020 2.4e-30 136.0 169 49.7
BolC3t13686H Brassica oleracea HOM05D001091 ORTHO05D001020 3.1e-30 135.6 159 50.9
BcaNung07296 Brassica carinata HOM05D001091 ORTHO05D001020 6.9e-30 134.4 164 50.6
AUR62001573 Chenopodium quinoa HOM05D001091 ORTHO05D001020 2.6e-29 132.5 160 48.8
Hund18804 Selenicereus undatus HOM05D001091 ORTHO05D001020 3.4e-29 132.1 155 49.0
BraA03t10366Z Brassica rapa HOM05D001091 ORTHO05D001020 5.8e-29 131.3 151 50.3
Ah.08g222100 Amaranthus hybridus HOM05D001091 ORTHO05D001020 1.3e-28 130.2 160 45.6
AUR62020212 Chenopodium quinoa HOM05D001091 ORTHO05D001020 1.7e-28 129.8 160 48.8
Sc21g0006730 Simmondsia chinensis HOM05D001091 ORTHO05D001020 2.2e-28 129.4 170 48.2
MSTRG.21007 Avicennia marina HOM05D001091 ORTHO05D001020 2.9e-28 129.0 151 45.7
AT5G22030 Arabidopsis thaliana HOM05D001091 ORTHO05D001020 4.9e-28 128.3 179 43.6
Cc01_g07850 Coffea canephora HOM05D001091 ORTHO05D001020 4.9e-28 128.3 149 48.3
SHI25267 Sapria himalayana HOM05D001091 ORTHO05D001020 1.4e-27 126.7 183 41.5
BcaC04g19537 Brassica carinata HOM05D001091 ORTHO05D015841 1.9e-27 126.3 135 52.6
SalBow6G2883 Salvia bowleyana HOM05D001091 ORTHO05D001020 1.9e-27 126.3 143 49.7
MSTRG.18797 Avicennia marina HOM05D001091 ORTHO05D001020 3.2e-27 125.6 156 42.9
Migut.D02381 Erythranthe guttata HOM05D001091 ORTHO05D001020 3.2e-27 125.6 141 48.9
SGA_v2.0_scaffold7G04006 Striga asiatica HOM05D001091 ORTHO05D001020 4.2e-27 125.2 156 43.6
BcaB01g04748 Brassica carinata HOM05D001091 ORTHO05D001020 7.1e-27 124.4 158 49.4
Oeu048823.1 Olea europaea HOM05D001091 ORTHO05D001020 7.1e-27 124.4 158 48.7
TAR636G1693 Trochodendron aralioides HOM05D001091 ORTHO05D001020 7.1e-27 124.4 127 52.8
Aqoxy1G00611 Aquilegia oxysepala HOM05D001091 ORTHO05D001020 6.0e-26 121.3 154 45.5
PSO384G3742 Papaver somniferum HOM05D001091 ORTHO05D001020 6.0e-26 121.3 156 46.8
PSO339G5290 Papaver somniferum HOM05D001091 ORTHO05D001020 7.9e-26 120.9 156 46.8
Peaxi162Scf00098g00113 Petunia axillaris HOM05D001091 ORTHO05D001020 2.3e-25 119.4 214 39.3
CSS0019153 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D015841 5.6e-24 114.8 95 58.9
DCAR_006189 Daucus carota HOM05D001091 ORTHO05D001020 5.6e-24 114.8 154 42.9
BcaC01g06610 Brassica carinata HOM05D001091 ORTHO05D001020 8.2e-23 110.9 135 48.9
HanXRQChr17g0561191 Helianthus annuus HOM05D001091 ORTHO05D001020 2.4e-22 109.4 158 46.8
CDE10G0151 Ceratophyllum demersum HOM05D001091 ORTHO05D001020 2.9e-20 102.4 148 41.9
vmacro22680 Vaccinium macrocarpon HOM05D001091 ORTHO05D015841 3.8e-20 102.1 76 63.2
Thhalv10027354m.g Eutrema salsugineum HOM05D001091 ORTHO05D015841 1.1e-19 100.5 174 36.8
Lsat_1_v5_gn_2_35221 Lactuca sativa HOM05D001091 ORTHO05D001020 3.2e-19 99.0 167 40.1
HPP92_028256 Vanilla planifolia HOM05D001091 ORTHO05D001020 4.2e-19 98.6 157 40.8
MBI05_g36783_MAGBIO Magnolia biondii HOM05D001091 ORTHO05D001020 2.1e-18 96.3 138 41.3
ECA238G3615 Erigeron canadensis HOM05D001091 ORTHO05D001020 6.0e-18 94.7 191 36.6
unitig_899.g15383 Utricularia gibba HOM05D001091 ORTHO05D015841 1.3e-17 93.6 192 34.9
CDE10G1029 Ceratophyllum demersum HOM05D001091 ORTHO05D001020 3.9e-17 92.0 148 39.9
ATR0697G235 Amborella trichopoda HOM05D001091 ORTHO05D001020 2.8e-15 85.9 160 37.5
CSS0002029 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D001020 1.9e-11 73.2 134 37.3
CSS0017286 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D001020 1.9e-11 73.2 134 37.3
ATR0585G129 Amborella trichopoda HOM05D001091 ORTHO05D015841 3.2e-11 72.4 133 36.8
Atru.chr8.1306 Acer truncatum HOM05D001091 ORTHO05D001020 5.1e-09 65.1 143 35.7
MD14G1042200 Malus domestica HOM05D001091 ORTHO05D001020 6.7e-09 64.7 149 34.2
RcHm_v2.0_Chr3g0478841 Rosa chinensis HOM05D001091 ORTHO05D050724 8.8e-09 64.3 54 57.4
MD12G1043100 Malus domestica HOM05D001091 ORTHO05D001020 1.5e-08 63.5 148 33.8
TWI74G0943 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 1.5e-08 63.5 149 30.2
ClCG10G018140 Citrullus lanatus HOM05D001091 ORTHO05D001020 2.0e-08 63.2 136 33.8
Ciclev10012460m.g Citrus clementina HOM05D001091 ORTHO05D001020 2.0e-08 63.2 154 37.0
Thecc.05G108000 Theobroma cacao HOM05D001091 ORTHO05D001020 2.0e-08 63.2 156 31.4
Sabra06G0154800 Salix brachista HOM05D001091 ORTHO05D001020 2.5e-08 62.8 145 33.1
Rhsim03G0059600 Rhododendron simsii HOM05D001091 ORTHO05D001020 3.3e-08 62.4 155 30.3
Lsat_1_v5_gn_6_34761 Lactuca sativa HOM05D001091 ORTHO05D001020 4.3e-08 62.0 152 32.2
Actinidia37764 Actinidia chinensis HOM05D001091 ORTHO05D001020 1.3e-07 60.5 157 35.0
Potri.006G201100 Populus trichocarpa HOM05D001091 ORTHO05D001020 1.3e-07 60.5 138 32.6
Cfa020062 Carpinus fangiana HOM05D001091 ORTHO05D001020 1.7e-07 60.1 144 31.2
RcHm_v2.0_Chr3g0476581 Rosa chinensis HOM05D001091 ORTHO05D001020 1.7e-07 60.1 141 35.5
arahy.Tifrunner.gnm1.ann1.UW76F4 Arachis hypogaea HOM05D001091 ORTHO05D001020 4.8e-07 58.5 140 32.1
CsaV3_3G038160 Cucumis sativus L. HOM05D001091 ORTHO05D001020 4.8e-07 58.5 136 32.4
arahy.Tifrunner.gnm1.ann1.6V7NNJ Arachis hypogaea HOM05D001091 ORTHO05D001020 6.3e-07 58.2 131 34.4
Ca_09067_v3 Cicer arietinum L. HOM05D001091 ORTHO05D001020 1.8e-06 56.6 140 32.9
Manes.09G043300 Manihot esculenta HOM05D001091 ORTHO05D001020 1.8e-06 56.6 145 31.0
TPR.G25811 Trifolium pratense HOM05D001091 ORTHO05D001020 1.8e-06 56.6 139 31.7
MELO3C009559.2 Cucumis melo HOM05D001091 ORTHO05D001020 2.4e-06 56.2 136 31.6
Medtr7g106570 Medicago truncatula HOM05D001091 ORTHO05D001020 2.4e-06 56.2 138 31.9
Prupe.7G091700 Prunus persica HOM05D001091 ORTHO05D001020 4.1e-06 55.5 145 35.2
Duzib128G1052 Durio zibethinus HOM05D001091 ORTHO05D001020 6.9e-06 54.7 152 30.3
vmacro07507 Vaccinium macrocarpon HOM05D001091 ORTHO05D001020 6.9e-06 54.7 207 23.7


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