Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 2.7e-191 671.8 331 100.0
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 5.6e-160 567.8 335 83.6
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 4.7e-159 564.7 334 81.7
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 8.0e-159 563.9 335 83.3
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.4e-158 563.1 325 84.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.3e-158 562.4 330 83.0
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 6.8e-158 560.8 333 82.9
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.0e-157 559.3 331 82.2
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.7e-156 556.2 335 80.9
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 7.0e-155 550.8 335 79.7
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.7e-153 546.2 327 81.0
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.7e-153 546.2 335 80.6
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 5.0e-153 544.7 331 80.4
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 2.5e-152 542.3 329 81.5
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.5e-152 542.3 331 78.9
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 2.5e-152 542.3 333 80.2
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 5.6e-152 541.2 320 82.8
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 5.6e-152 541.2 331 80.4
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 4.7e-151 538.1 330 79.1
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 4.0e-150 535.0 321 81.3
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.5e-149 533.1 330 78.5
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 2.6e-149 532.3 321 81.0
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 2.6e-149 532.3 332 78.6
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 3.4e-149 531.9 327 78.6
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 4.4e-149 531.6 321 80.4
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 3.7e-148 528.5 333 78.1
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 3.7e-148 528.5 332 77.4
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 4.9e-148 528.1 377 71.9
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 6.4e-148 527.7 327 78.0
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 8.3e-148 527.3 332 78.6
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 8.3e-148 527.3 323 80.8
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 2.4e-147 525.8 331 78.2
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 3.2e-147 525.4 331 78.2
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 3.2e-147 525.4 331 78.9
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 4.1e-147 525.0 326 79.1
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.1e-147 525.0 376 71.8
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 5.4e-147 524.6 322 79.8
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 9.2e-147 523.9 331 77.3
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.2e-146 523.5 303 82.8
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.6e-146 523.1 330 77.9
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 2.1e-146 522.7 330 77.3
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.7e-146 522.3 339 76.7
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 3.5e-146 521.9 305 83.9
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 4.6e-146 521.5 322 79.2
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 4.6e-146 521.5 314 81.2
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 7.8e-146 520.8 337 76.0
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.0e-145 520.4 325 78.8
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.0e-145 520.4 337 76.0
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.7e-145 519.6 339 76.7
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 3.9e-145 518.5 330 77.3
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 8.6e-145 517.3 326 77.9
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 8.6e-145 517.3 325 78.5
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.1e-144 516.9 327 78.0
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-144 516.9 339 75.8
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.5e-144 516.5 342 75.1
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.5e-144 516.5 330 77.0
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.3e-144 515.4 332 77.4
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 3.3e-144 515.4 326 77.6
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 5.6e-144 514.6 342 74.9
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 7.3e-144 514.2 331 76.7
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 2.1e-143 512.7 321 78.8
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 2.0e-141 506.1 348 73.3
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.6e-141 504.2 362 71.0
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 9.9e-141 503.8 313 79.6
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 2.9e-140 502.3 321 77.3
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.9e-139 499.6 325 75.4
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 2.4e-139 499.2 326 75.8
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 3.2e-139 498.8 321 77.6
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.2e-138 496.9 330 74.2
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.6e-138 496.5 326 75.5
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 3.9e-137 491.9 326 76.4
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 7.3e-136 487.6 330 72.1
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 4.7e-135 485.0 364 69.2
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-133 479.9 334 72.2
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 2.0e-133 479.6 352 69.9
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 2.0e-133 479.6 352 69.9
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 7.6e-133 477.6 307 78.5
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 9.9e-133 477.2 326 73.3
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 7.1e-131 471.1 306 79.1
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 9.3e-131 470.7 353 69.7
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.6e-130 468.4 365 66.6
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 6.0e-130 468.0 333 71.2
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 7.8e-130 467.6 291 79.0
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.0e-129 467.2 319 74.6
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.7e-129 466.5 283 82.3
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 1.8e-126 456.4 331 70.4
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 5.3e-126 454.9 383 62.7
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 5.8e-125 451.4 331 71.3
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 3.8e-124 448.7 314 70.4
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 8.4e-124 447.6 288 78.8
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 3.5e-122 442.2 324 68.8
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.0e-121 440.7 267 78.7
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 2.3e-121 439.5 330 67.3
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 6.2e-119 431.4 381 61.2
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.1e-118 429.1 290 75.2
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 8.4e-116 421.0 299 70.9
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 9.3e-115 417.5 281 74.0
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.2e-114 417.2 263 79.1
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 2.1e-114 416.4 296 68.2
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.0e-113 414.1 337 64.7
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 7.1e-107 391.3 288 70.5
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.1e-106 389.8 234 83.8
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 2.1e-106 389.8 285 66.3
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 3.5e-106 389.0 327 59.9
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 3.5e-106 389.0 317 59.6
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 2.4e-102 376.3 337 61.4
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 3.8e-100 369.0 322 55.9
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.4e-99 367.1 281 68.0
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 2.5e-99 366.3 283 67.1
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 6.7e-97 358.2 326 56.7
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 2.6e-93 346.3 307 54.7
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 2.7e-90 336.3 253 68.0
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.5e-88 330.5 227 70.5
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 3.2e-83 312.8 233 64.4
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.0e-81 306.2 224 69.2
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 3.6e-74 282.7 225 66.2
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.6e-69 267.3 364 43.7
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 5.0e-60 235.7 181 66.9
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 8.8e-57 224.9 140 80.0
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.6e-53 214.2 143 73.4
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.7e-47 194.1 333 36.3
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 9.2e-46 188.3 129 72.1
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 5.4e-38 162.5 281 36.7
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 3.0e-36 156.8 106 67.9
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.1e-27 128.3 97 67.0
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 8.9e-17 92.0 86 54.7
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.0e-16 90.9 82 53.7
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 6.4e-15 85.9 42 88.1
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 6.0e-13 79.3 50 78.0


User provided reference genes

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