Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc101.2 Carica papaya HOM05D000004 ORTHO05D011645 2.7e-32 141.4 70 100.0
Cpa.g.sc2836.1 Carica papaya HOM05D000004 ORTHO05D000002 9.7e-22 106.3 69 76.8
Cpa.g.sc127.13 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-21 104.0 70 77.1
Cpa.g.sc2878.1 Carica papaya HOM05D000004 ORTHO05D011645 1.1e-20 102.8 69 76.8
Cpa.g.sc100.28 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-20 100.9 67 74.6
Cpa.g.sc243.3 Carica papaya HOM05D000004 ORTHO05D011645 6.9e-20 100.1 69 72.5
Cpa.g.sc239.4 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-19 99.4 69 73.9
Cpa.g.sc582.1 Carica papaya HOM05D000004 ORTHO05D011645 5.9e-19 97.1 69 71.0
Cpa.g.sc38.74 Carica papaya HOM05D000004 ORTHO05D000563 5.0e-18 94.0 69 73.9
Cpa.g.sc28.86 Carica papaya HOM05D000004 ORTHO05D000563 8.5e-18 93.2 65 72.3
Cpa.g.sc38.36 Carica papaya HOM05D000004 ORTHO05D000563 5.5e-17 90.5 66 66.7
Cpa.g.sc66.62 Carica papaya HOM05D000004 ORTHO05D011645 9.4e-17 89.7 66 68.2
Cpa.g.sc31.29 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-16 89.0 50 86.0
Cpa.g.sc1785.1 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-15 85.9 55 74.5
Cpa.g.sc31.87 Carica papaya HOM05D000004 ORTHO05D000563 3.0e-15 84.7 56 73.2
Cpa.g.sc35.74 Carica papaya HOM05D000004 ORTHO05D000563 8.8e-15 83.2 54 75.9
Cpa.g.sc42.6 Carica papaya HOM05D000004 ORTHO05D011645 3.3e-14 81.3 58 70.7
Cpa.g.sc73.45 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-13 78.6 68 60.3
Cpa.g.sc15.23 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-13 77.4 56 66.1
Cpa.g.sc41.27 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-12 75.9 51 74.5
Cpa.g.sc1.176 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-12 75.5 57 64.9
Cpa.g.sc2292.1 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-11 72.8 61 63.9
Cpa.g.sc11.159 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-11 71.6 48 75.0
Cpa.g.sc32.39 Carica papaya HOM05D000004 ORTHO05D011645 2.2e-10 68.6 54 61.1
Cpa.g.sc56.12 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-09 65.9 58 56.9
Cpa.g.sc531.2 Carica papaya HOM05D000004 ORTHO05D011645 1.9e-09 65.5 59 61.0
Cpa.g.sc61.48 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-09 64.7 43 72.1
Cpa.g.sc927.2 Carica papaya HOM05D000004 ORTHO05D011645 4.2e-09 64.3 66 51.5
Cpa.g.sc100.16 Carica papaya HOM05D000004 ORTHO05D011645 7.2e-09 63.5 37 83.8
Cpa.g.sc153.23 Carica papaya HOM05D000004 ORTHO05D011645 1.2e-08 62.8 63 54.0
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.4 62 51.6
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.4 62 51.6
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.4 62 51.6
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.4 62 51.6
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.4 62 51.6
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.4 62 51.6
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.4 62 51.6
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.4 62 51.6
Cpa.g.sc57.14 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-08 62.0 66 56.1
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-08 61.6 62 50.0
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-08 61.6 62 50.0
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-08 61.6 62 50.0
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-08 61.6 62 50.0
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 2.7e-08 61.6 57 50.9
PGR142G0162 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-08 61.6 62 50.0
TAR452G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000563 2.7e-08 61.6 65 49.2
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-08 61.2 62 48.4
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-08 61.2 62 50.0
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-08 61.2 62 50.0
Cpa.g.sc2.22 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-08 60.8 62 53.2
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 6.1e-08 60.5 62 50.0
Cpa.g.sc4.120 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-07 59.7 67 49.3
Cpa.g.sc95.80 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-07 59.7 61 49.2
Cpa.g.sc105.4 Carica papaya HOM05D000004 ORTHO05D011645 1.4e-07 59.3 37 75.7
Cpa.g.sc22.67 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 59.3 64 48.4
Cpa.g.sc33.141 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 59.3 66 50.0
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-07 59.3 57 50.9
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-07 59.3 57 50.9
QL10p037628 Quercus lobata HOM05D000004 ORTHO05D000002 1.4e-07 59.3 61 49.2
Cpa.g.sc100.1 Carica papaya HOM05D000004 ORTHO05D011645 2.3e-07 58.5 37 78.4
Cpa.g.sc60.97 Carica papaya HOM05D000004 ORTHO05D011645 2.3e-07 58.5 63 50.8
Cpa.g.sc68.22 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-07 58.5 67 49.3
PGR031G0364 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-07 58.5 63 47.6
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 3.0e-07 58.2 63 46.0
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 4.0e-07 57.8 52 53.8
Cpa.g.sc93.12 Carica papaya HOM05D000004 ORTHO05D000563 4.0e-07 57.8 53 56.6
PGR102G0770 Punica granatum HOM05D000004 ORTHO05D000002 4.0e-07 57.8 63 44.4
Cpa.g.sc0.128 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-07 57.4 56 51.8
Cpa.g.sc49.152 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-07 57.4 55 54.5
Cpa.g.sc23.29 Carica papaya HOM05D000004 ORTHO05D011645 6.7e-07 57.0 36 77.8
Cpa.g.sc69.22 Carica papaya HOM05D000004 ORTHO05D011645 1.5e-06 55.8 53 52.8
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 1.5e-06 55.8 57 47.4
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 1.5e-06 55.8 57 47.4
Cpa.g.sc2219.1 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-06 55.5 52 51.9
Cpa.g.sc484.2 Carica papaya HOM05D000004 ORTHO05D011645 2.0e-06 55.5 63 47.6
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-06 55.5 62 50.0
Cpa.g.sc100.20 Carica papaya HOM05D000004 ORTHO05D011645 2.6e-06 55.1 52 55.8
Cpa.g.sc124.44 Carica papaya HOM05D000004 ORTHO05D011645 2.6e-06 55.1 36 77.8
Cpa.g.sc23.40 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-06 55.1 52 53.8
Cpa.g.sc78.90 Carica papaya HOM05D000004 ORTHO05D011645 2.6e-06 55.1 37 78.4
PGR004G2150 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-06 55.1 63 46.0
PGR004G2489 Punica granatum HOM05D000004 ORTHO05D000002 3.3e-06 54.7 63 44.4
PGR044G0528 Punica granatum HOM05D000004 ORTHO05D000002 3.3e-06 54.7 63 44.4
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 4.4e-06 54.3 56 50.0
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 4.4e-06 54.3 57 45.6
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 4.4e-06 54.3 57 47.4
Cpa.g.sc0.189 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-06 53.9 52 51.9
Cpa.g.sc225.10 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-06 53.5 52 51.9
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-06 53.5 57 47.4
SHI01700 Sapria himalayana HOM05D000004 ORTHO05D000563 7.5e-06 53.5 47 48.9
SHI30669 Sapria himalayana HOM05D000004 ORTHO05D000002 9.7e-06 53.1 45 48.9


User provided reference genes

Program Settings