Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 2.8e-32 141.4 73 100.0
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 6.1e-27 123.6 73 84.9
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 1.4e-26 122.5 73 84.9
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 3.0e-26 121.3 73 83.6
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 3.0e-26 121.3 73 83.6
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 4.0e-26 120.9 73 84.9
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 4.0e-26 120.9 73 84.9
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 4.0e-26 120.9 73 84.9
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 4.0e-26 120.9 72 83.3
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 6.8e-26 120.2 73 83.6
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 6.8e-26 120.2 73 82.2
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 1.2e-25 119.4 71 83.1
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 1.5e-25 119.0 73 83.6
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 1.5e-25 119.0 73 80.8
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 2.0e-25 118.6 73 82.2
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 2.0e-25 118.6 73 82.2
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 2.0e-25 118.6 73 82.2
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 2.6e-25 118.2 73 80.8
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 3.4e-25 117.9 73 83.6
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 3.4e-25 117.9 73 83.6
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.4e-25 117.5 73 80.8
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.4e-25 117.5 73 80.8
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 4.4e-25 117.5 73 80.8
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 7.5e-25 116.7 73 82.2
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 7.5e-25 116.7 72 83.3
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 7.5e-25 116.7 73 83.6
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 9.8e-25 116.3 73 79.5
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 9.8e-25 116.3 73 79.5
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 9.8e-25 116.3 73 79.5
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 9.8e-25 116.3 73 83.6
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 9.8e-25 116.3 73 80.8
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 9.8e-25 116.3 66 87.9
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 9.8e-25 116.3 73 79.5
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 1.3e-24 115.9 73 82.2
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 1.3e-24 115.9 73 83.6
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.3e-24 115.9 73 80.8
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 1.7e-24 115.5 73 80.8
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 1.7e-24 115.5 73 80.8
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 2.2e-24 115.2 73 82.2
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 2.2e-24 115.2 73 78.1
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.8e-24 114.8 73 82.2
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.8e-24 114.8 72 81.9
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 3.7e-24 114.4 71 81.7
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 3.7e-24 114.4 73 82.2
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 4.9e-24 114.0 66 84.8
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 8.3e-24 113.2 74 82.4
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 8.3e-24 113.2 65 87.7
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 8.3e-24 113.2 73 80.8
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.1e-23 112.8 73 78.1
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 1.1e-23 112.8 73 78.1
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.1e-23 112.8 73 76.7
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.4e-23 112.5 65 86.2
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.4e-23 112.5 65 86.2
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 1.4e-23 112.5 73 76.7
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 1.4e-23 112.5 73 76.7
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.4e-23 112.5 67 85.1
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.8e-23 112.1 73 74.0
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.8e-23 112.1 73 79.5
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.8e-23 112.1 73 79.5
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 2.4e-23 111.7 73 78.1
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 2.4e-23 111.7 73 78.1
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 2.4e-23 111.7 68 80.9
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 3.1e-23 111.3 64 85.9
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 3.1e-23 111.3 60 90.0
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 3.1e-23 111.3 65 84.6
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 3.1e-23 111.3 74 81.1
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 4.1e-23 110.9 75 78.7
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 4.1e-23 110.9 74 82.4
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 4.1e-23 110.9 67 80.6
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 5.4e-23 110.5 62 87.1
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 7.0e-23 110.2 71 80.3
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 7.0e-23 110.2 71 80.3
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 1.2e-22 109.4 73 75.3
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 1.2e-22 109.4 72 77.8
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.6e-22 109.0 69 79.7
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 2.0e-22 108.6 73 72.6
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 2.0e-22 108.6 73 72.6
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 2.0e-22 108.6 72 73.6
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.7e-22 108.2 66 77.3
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 2.7e-22 108.2 67 79.1
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 2.7e-22 108.2 73 75.3
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 3.5e-22 107.8 66 80.3
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 3.5e-22 107.8 68 80.9
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 3.5e-22 107.8 71 77.5
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 5.9e-22 107.1 67 77.6
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 5.9e-22 107.1 67 77.6
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 5.9e-22 107.1 67 77.6
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 5.9e-22 107.1 71 74.6
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 7.7e-22 106.7 68 80.9
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 7.7e-22 106.7 64 79.7
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 1.0e-21 106.3 67 77.6
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 1.0e-21 106.3 73 74.0
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 1.7e-21 105.5 65 78.5
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.7e-21 105.5 68 79.4
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.7e-21 105.5 67 76.1
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 1.7e-21 105.5 72 77.8
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 2.3e-21 105.1 68 77.9
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 2.3e-21 105.1 67 76.1
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 3.8e-21 104.4 73 72.6
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 1.5e-20 102.4 69 72.5
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 1.9e-20 102.1 73 71.2
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 2.5e-20 101.7 73 74.0
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 1.2e-19 99.4 77 68.8
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 2.1e-19 98.6 65 76.9
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 1.4e-18 95.9 61 78.7
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 4.0e-18 94.4 65 72.3
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.5e-17 92.4 72 63.9
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 4.4e-17 90.9 63 71.4
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 9.8e-17 89.7 59 72.9
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 1.7e-16 89.0 67 64.2
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 2.4e-15 85.1 71 63.4
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 5.4e-15 84.0 71 63.4
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 5.9e-14 80.5 58 67.2
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 8.6e-13 76.6 58 65.5
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 8.6e-13 76.6 55 69.1
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 2.5e-12 75.1 67 59.7


User provided reference genes

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