Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc10.233 Carica papaya HOM05D007863 ORTHO05D009265 7.7e-30 133.3 73 100.0
Thecc.06G070300 Theobroma cacao HOM05D007863 ORTHO05D009265 1.6e-14 82.4 50 86.0
Gohir.A10G075500 Gossypium hirsutum HOM05D007863 ORTHO05D009265 2.9e-13 78.2 60 73.3
Gohir.D10G076000 Gossypium hirsutum HOM05D007863 ORTHO05D009265 2.9e-13 78.2 60 73.3
Gorai.011G081800 Gossypium raimondii HOM05D007863 ORTHO05D009265 2.9e-13 78.2 60 73.3
COL.COLO4_12919 Corchorus olitorius HOM05D007863 ORTHO05D009265 8.6e-13 76.6 49 81.6
Nitab4.5_0001764g0040 Nicotiana tabacum HOM05D007863 ORTHO05D009265 1.5e-12 75.9 68 63.2
Ciclev10027122m.g Citrus clementina HOM05D007863 ORTHO05D009265 3.3e-12 74.7 46 82.6
Nitab4.5_0010254g0050 Nicotiana tabacum HOM05D007863 ORTHO05D009265 3.3e-12 74.7 56 71.4
Potri.003G062300 Populus trichocarpa HOM05D007863 ORTHO05D009265 4.3e-12 74.3 56 71.4
Solyc03g116510.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 4.3e-12 74.3 55 72.7
CAN.G407.102 Capsicum annuum HOM05D007863 ORTHO05D009265 5.6e-12 73.9 62 71.0
CiPaw.01G245400 Carya illinoinensis HOM05D007863 ORTHO05D009265 9.5e-12 73.2 49 77.6
Sopen03g035400 Solanum pennellii HOM05D007863 ORTHO05D009265 9.5e-12 73.2 70 61.4
QL05p028236 Quercus lobata HOM05D007863 ORTHO05D009265 1.2e-11 72.8 62 64.5
THA.LOC104808229 Tarenaya hassleriana HOM05D007863 ORTHO05D009265 1.6e-11 72.4 48 77.1
Cfa001994 Carpinus fangiana HOM05D007863 ORTHO05D009265 2.1e-11 72.0 49 77.6
CSS0005162 Camellia sinensis var. sinensis HOM05D007863 ORTHO05D009265 2.8e-11 71.6 47 78.7
Manes.04G115800 Manihot esculenta HOM05D007863 ORTHO05D009265 2.8e-11 71.6 44 84.1
Prupe.3G082000 Prunus persica HOM05D007863 ORTHO05D009265 6.1e-11 70.5 49 77.6
Hma1.2p1_0515F.1_g170180 Hydrangea macrophylla HOM05D007863 ORTHO05D009265 1.0e-10 69.7 61 68.9
Rhsim08G0215300 Rhododendron simsii HOM05D007863 ORTHO05D009265 1.8e-10 68.9 49 75.5
TWI12G0528 Tripterygium wilfordii HOM05D007863 ORTHO05D009265 1.8e-10 68.9 68 60.3
CANSAT56G0457 Cannabis sativa HOM05D007863 ORTHO05D009265 2.3e-10 68.6 45 77.8
RcHm_v2.0_Chr2g0136401 Rosa chinensis HOM05D007863 ORTHO05D009265 3.1e-10 68.2 51 70.6
MD17G1207500 Malus domestica HOM05D007863 ORTHO05D009265 4.0e-10 67.8 45 80.0
Potri.001G171701 Populus trichocarpa HOM05D007863 ORTHO05D009265 4.0e-10 67.8 56 66.1
Haze_16524 Corylus avellana HOM05D007863 ORTHO05D009265 6.8e-10 67.0 54 72.2
PGR102G1764 Punica granatum HOM05D007863 ORTHO05D009265 6.8e-10 67.0 49 73.5
EL10Ac9g21922 Beta vulgaris HOM05D007863 ORTHO05D009265 8.9e-10 66.6 46 80.4
FAN05G0465 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.0e-09 65.5 51 66.7
Manes.11G054000 Manihot esculenta HOM05D007863 ORTHO05D009265 2.6e-09 65.1 71 53.5
Sabra03G0036200 Salix brachista HOM05D007863 ORTHO05D009265 3.4e-09 64.7 56 62.5
FvH4_6g30170 Fragaria vesca HOM05D007863 ORTHO05D009265 4.4e-09 64.3 71 56.3
FAN14G0247 Fragaria x ananassa HOM05D007863 ORTHO05D009265 4.4e-09 64.3 71 56.3
FAN02G1499 Fragaria x ananassa HOM05D007863 ORTHO05D009265 5.8e-09 63.9 71 54.9
FAN09G3905 Fragaria x ananassa HOM05D007863 ORTHO05D009265 5.8e-09 63.9 71 54.9
AUR62011544 Chenopodium quinoa HOM05D007863 ORTHO05D009265 9.8e-09 63.2 69 59.4
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 9.8e-09 63.2 45 75.6
Ca_01070_v3 Cicer arietinum L. HOM05D007863 ORTHO05D009265 1.3e-08 62.8 71 53.5
Lj3g0006922 Lotus japonicus HOM05D007863 ORTHO05D009265 1.7e-08 62.4 67 56.7
Lalb_Chr14g0373721 Lupinus albus HOM05D007863 ORTHO05D009265 3.7e-08 61.2 45 73.3
Rhsim12G0192500 Rhododendron simsii HOM05D007863 ORTHO05D009265 3.7e-08 61.2 74 52.7
arahy.Tifrunner.gnm1.ann1.JQ3RYK Arachis hypogaea HOM05D007863 ORTHO05D009265 1.1e-07 59.7 72 51.4
Migut.I00793 Erythranthe guttata HOM05D007863 ORTHO05D009265 1.1e-07 59.7 44 70.5
Lj3g0003830 Lotus japonicus HOM05D007863 ORTHO05D009265 1.1e-07 59.7 76 50.0
DCAR_025492 Daucus carota HOM05D007863 ORTHO05D009265 1.4e-07 59.3 67 52.2
Glyma.07G031800 Glycine max HOM05D007863 ORTHO05D009265 1.4e-07 59.3 43 67.4
Medtr2g103440 Medicago truncatula HOM05D007863 ORTHO05D009265 1.4e-07 59.3 52 59.6
TPR.G37228 Trifolium pratense HOM05D007863 ORTHO05D009265 1.4e-07 59.3 52 63.5
Sopen03g035410 Solanum pennellii HOM05D007863 ORTHO05D009265 3.2e-07 58.2 62 56.5
Psat5g301160 Pisum sativum HOM05D007863 ORTHO05D009265 4.1e-07 57.8 77 42.9
Atru.chr1.3052 Acer truncatum HOM05D007863 ORTHO05D009265 9.2e-07 56.6 35 80.0
Lalb_Chr04g0262451 Lupinus albus HOM05D007863 ORTHO05D009265 1.6e-06 55.8 75 45.3
TPR.G38680 Trifolium pratense HOM05D007863 ORTHO05D009265 1.6e-06 55.8 44 68.2
Medtr4g011030 Medicago truncatula HOM05D007863 ORTHO05D009265 2.0e-06 55.5 44 68.2
Glyma.08G211000 Glycine max HOM05D007863 ORTHO05D009265 2.7e-06 55.1 42 66.7
Psat7g256040 Pisum sativum HOM05D007863 ORTHO05D009265 2.7e-06 55.1 44 68.2
Solyc03g116520.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 2.7e-06 55.1 62 56.5
MBI01_g37813_MAGBIO Magnolia biondii HOM05D007863 ORTHO05D009265 4.6e-06 54.3 37 73.0
DCAR_016255 Daucus carota HOM05D007863 ORTHO05D009265 6.0e-06 53.9 77 45.5


User provided reference genes

Program Settings