Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 8.9e-222 774.2 756 100.0
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 5.5e-62 243.4 326 65.3
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 5.1e-60 236.9 332 63.6
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 2.6e-56 224.6 327 59.0
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 6.5e-55 219.9 310 65.8
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 3.6e-53 214.2 315 64.1
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 2.6e-51 208.0 312 63.8
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 5.7e-51 206.8 321 61.4
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 8.2e-50 203.0 331 59.5
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 8.2e-50 203.0 319 62.4
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 1.4e-49 202.2 336 59.8
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 2.0e-48 198.4 293 64.8
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 2.6e-48 198.0 310 62.9
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 3.5e-48 197.6 300 65.3
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 1.3e-47 195.7 325 58.5
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.6e-45 188.7 333 57.7
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 2.7e-45 188.0 304 62.8
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 6.1e-45 186.8 334 57.5
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 8.0e-45 186.4 333 57.7
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 8.8e-44 183.0 246 74.0
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 2.0e-43 181.8 307 60.9
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 3.3e-43 181.0 312 61.9
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 5.7e-43 180.3 315 60.3
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 8.2e-42 176.4 260 66.5
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 1.1e-41 176.0 260 66.9
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 2.2e-39 168.3 304 59.9
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 2.9e-39 167.9 269 65.1
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 5.0e-39 167.2 303 60.1
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-38 166.0 302 60.6
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 5.5e-38 163.7 341 51.3
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 1.2e-37 162.5 321 56.1
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.2e-37 162.5 319 56.1
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 6.1e-37 160.2 172 53.5
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 3.0e-36 157.9 302 59.3
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 5.2e-36 157.1 300 59.0
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 5.2e-36 157.1 214 75.7
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 6.8e-36 156.8 317 56.2
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 8.8e-36 156.4 345 54.5
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 1.2e-35 156.0 302 60.3
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 1.2e-35 156.0 316 57.6
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 1.2e-35 156.0 247 66.4
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 3.4e-35 154.5 298 54.0
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 4.4e-35 154.1 304 59.2
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 4.4e-35 154.1 327 54.1
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 2.2e-34 151.8 319 54.5
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 2.8e-34 151.4 300 58.3
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 3.7e-34 151.0 215 74.9
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 4.8e-34 150.6 319 54.2
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 3.5e-32 144.4 291 61.2
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 4.5e-32 144.1 328 49.7
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 7.7e-32 143.3 318 57.5
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 1.0e-31 142.9 296 60.1
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 6.5e-31 140.2 302 53.6
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 2.5e-30 138.3 311 55.0
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 1.6e-29 135.6 299 59.5
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 4.7e-29 134.0 318 55.3
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 4.7e-29 134.0 309 45.6
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 6.1e-29 133.7 303 58.7
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 1.4e-28 132.5 260 53.5
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 3.0e-28 131.3 297 59.3
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 1.5e-27 129.0 300 57.7
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 2.0e-27 128.6 312 54.2
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 3.4e-27 127.9 330 43.0
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 4.4e-27 127.5 300 57.7
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 1.7e-26 125.6 300 57.7
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 2.2e-26 125.2 295 56.9
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 3.7e-26 124.4 297 57.6
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 4.1e-25 120.9 296 54.1
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 1.2e-24 119.4 309 52.8
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 1.6e-24 119.0 293 56.3
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 2.3e-23 115.2 290 51.0
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 3.8e-23 114.4 240 62.1
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 2.5e-22 111.7 297 53.9
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 8.0e-21 106.7 156 43.6
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 3.0e-20 104.8 201 58.7
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.2e-19 102.8 78 59.0
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 2.6e-19 101.7 192 68.2
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 3.4e-19 101.3 92 53.3
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 4.9e-18 97.4 245 52.7
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 1.1e-17 96.3 229 60.7
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 1.4e-17 95.9 238 58.8
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 3.2e-17 94.7 87 50.6
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 9.2e-17 93.2 206 67.0
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 9.2e-17 93.2 160 40.6
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 9.2e-17 93.2 150 41.3
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 1.6e-16 92.4 183 77.6
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 3.5e-16 91.3 168 38.7
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 3.9e-15 87.8 239 47.7
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 3.9e-15 87.8 108 42.6
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 2.5e-14 85.1 235 48.5
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.8e-12 79.0 78 51.3
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 5.8e-11 73.9 164 33.5
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 3.7e-10 71.2 124 34.7
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 1.1e-09 69.7 77 45.5


User provided reference genes

Program Settings