Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 9.0e-119 430.3 216 100.0
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 4.0e-74 282.0 211 69.7
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 4.0e-74 282.0 192 75.5
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 4.4e-73 278.5 211 67.3
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 7.5e-73 277.7 211 68.7
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.3e-72 276.9 209 68.9
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 2.9e-72 275.8 210 68.6
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.1e-71 273.9 192 71.4
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 2.4e-71 272.7 210 68.6
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 4.1e-71 271.9 192 69.8
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 4.6e-70 268.5 207 66.2
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 4.6e-70 268.5 192 71.9
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 5.9e-70 268.1 189 70.9
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.7e-69 266.5 198 67.7
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 2.3e-69 266.2 185 71.9
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 8.6e-69 264.2 211 63.5
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 4.3e-68 261.9 211 63.0
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 5.6e-68 261.5 209 63.6
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 7.3e-68 261.2 211 62.6
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 1.2e-67 260.4 209 65.6
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.1e-67 259.6 211 62.1
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.1e-67 259.6 211 62.1
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 3.6e-67 258.8 215 64.7
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 8.0e-67 257.7 211 64.5
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 4.0e-66 255.4 192 66.7
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 4.0e-66 255.4 211 62.6
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 8.9e-66 254.2 212 63.2
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 1.5e-65 253.4 192 66.1
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 2.0e-65 253.1 209 64.6
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 5.8e-65 251.5 189 67.2
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 5.8e-65 251.5 209 59.8
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 7.5e-65 251.1 192 65.6
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 9.8e-65 250.8 203 63.1
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.3e-64 250.4 186 67.7
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 2.9e-64 249.2 212 60.8
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 3.7e-64 248.8 199 61.3
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 3.7e-64 248.8 212 61.3
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 4.9e-64 248.4 213 62.4
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 4.9e-64 248.4 211 60.7
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 8.3e-64 247.7 209 62.2
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.1e-63 247.3 192 64.6
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.4e-63 246.9 207 60.9
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.9e-63 246.5 207 62.3
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.9e-63 246.5 201 63.2
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 2.4e-63 246.1 204 60.3
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 2.4e-63 246.1 204 60.8
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 3.2e-63 245.7 200 63.0
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 3.2e-63 245.7 192 62.0
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 3.2e-63 245.7 198 65.7
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 5.4e-63 245.0 200 63.0
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 7.0e-63 244.6 207 60.9
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 9.2e-63 244.2 188 64.4
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 9.2e-63 244.2 179 69.8
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.2e-62 243.8 189 63.0
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 2.0e-62 243.0 212 57.5
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 2.7e-62 242.7 211 59.2
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 4.6e-62 241.9 197 62.4
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 7.8e-62 241.1 194 60.8
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 2.3e-61 239.6 211 59.2
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 3.9e-61 238.8 205 59.5
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 6.2e-59 231.5 176 65.9
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 1.8e-58 229.9 183 61.7
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 3.1e-58 229.2 178 64.6
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 3.1e-58 229.2 176 62.5
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 5.2e-58 228.4 173 67.6
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 8.9e-58 227.6 176 65.9
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-57 227.3 176 65.3
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 4.4e-57 225.3 176 63.6
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 5.8e-57 224.9 204 56.4
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 3.7e-56 222.2 203 57.6
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 3.7e-56 222.2 180 60.6
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 6.4e-56 221.5 257 47.5
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.9e-55 219.9 203 57.6
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 7.1e-55 218.0 196 59.2
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 7.1e-55 218.0 156 70.5
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 7.1e-55 218.0 200 54.5
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 6.0e-54 214.9 183 56.8
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 6.6e-53 211.5 205 53.7
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 2.5e-52 209.5 186 58.6
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 9.5e-52 207.6 192 57.3
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 4.9e-48 195.3 183 57.9
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 1.6e-46 190.3 198 51.5
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 1.0e-45 187.6 179 50.3
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.3e-45 186.4 216 47.2
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 5.1e-45 185.3 179 49.7
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.5e-44 183.0 137 67.2
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.2e-43 180.6 162 58.0
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.6e-43 180.3 198 54.5
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 2.4e-42 176.4 143 60.1
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 2.4e-42 176.4 176 48.9
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 7.6e-41 171.4 184 45.1
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.7e-40 170.2 156 58.3
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 1.1e-39 167.5 136 61.0
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 5.1e-37 158.7 110 70.0
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 5.1e-37 158.7 176 46.6
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 8.7e-37 157.9 193 43.5
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 4.3e-36 155.6 127 64.6
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 5.6e-36 155.2 124 66.1
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.3e-35 154.1 97 73.2
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 1.6e-35 153.7 150 49.3
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 2.6e-33 146.4 88 79.5
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 3.4e-33 146.0 134 53.7
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 5.8e-33 145.2 124 54.8
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 5.8e-33 145.2 180 45.0
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 9.9e-33 144.4 149 49.7
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 9.9e-33 144.4 109 65.1
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 2.9e-32 142.9 102 66.7
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 6.2e-27 125.2 115 56.5
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 1.1e-26 124.4 166 46.4
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.8e-26 123.6 75 80.0
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.9e-26 121.7 148 51.4
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 8.7e-21 104.8 156 37.2
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 4.3e-20 102.4 84 59.5
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.0e-16 91.3 171 30.4
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 2.2e-16 90.1 112 42.9
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.6e-14 84.0 49 79.6
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 2.4e-10 70.1 49 65.3
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.7e-06 56.6 36 75.0


User provided reference genes

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