Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 1.1e-124 449.9 225 100.0
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 9.6e-55 217.6 173 67.6
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 8.1e-54 214.5 173 67.6
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 3.4e-52 209.1 167 67.1
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 5.8e-52 208.4 193 60.1
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 5.8e-52 208.4 172 65.7
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 2.2e-51 206.5 153 70.6
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 2.9e-51 206.1 135 76.3
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 6.4e-51 204.9 174 63.8
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.4e-50 203.0 173 64.7
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 7.1e-50 201.4 183 62.8
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.0e-48 197.6 187 60.4
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 1.3e-48 197.2 186 58.6
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.8e-48 196.8 183 61.2
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 1.5e-47 193.7 156 64.7
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.5e-47 193.0 185 60.0
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 3.3e-47 192.6 135 70.4
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 1.3e-46 190.7 135 72.6
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 2.8e-46 189.5 134 70.1
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 2.8e-46 189.5 133 71.4
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 4.8e-46 188.7 180 57.8
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 1.1e-45 187.6 185 61.1
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.8e-45 186.8 131 70.2
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 2.4e-45 186.4 157 61.8
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 2.4e-45 186.4 176 59.1
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 2.4e-45 186.4 171 62.6
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 5.3e-45 185.3 134 67.2
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 9.0e-45 184.5 159 61.0
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 1.2e-44 184.1 168 60.1
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 1.5e-44 183.7 162 61.1
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 2.0e-44 183.3 159 62.3
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 3.4e-44 182.6 130 70.0
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 4.5e-44 182.2 187 55.6
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 4.5e-44 182.2 143 68.5
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 4.5e-44 182.2 177 55.9
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 7.6e-44 181.4 159 60.4
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.0e-43 181.0 179 56.4
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.3e-43 180.6 195 53.8
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.7e-43 180.3 187 55.1
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.7e-43 180.3 155 60.6
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 2.9e-43 179.5 179 57.0
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 4.9e-43 178.7 149 63.1
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 8.4e-43 177.9 180 55.6
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 1.1e-42 177.6 112 79.5
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 1.1e-42 177.6 173 56.6
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.9e-42 176.8 158 60.1
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 1.9e-42 176.8 178 59.0
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.9e-42 176.8 134 66.4
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 1.9e-42 176.8 174 56.9
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.5e-42 176.4 148 62.8
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 3.2e-42 176.0 195 51.8
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 5.5e-42 175.3 180 56.7
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 7.1e-42 174.9 196 53.6
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 9.3e-42 174.5 147 61.9
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 9.3e-42 174.5 186 56.5
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 9.3e-42 174.5 159 56.6
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.2e-41 174.1 120 70.8
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 1.2e-41 174.1 191 51.8
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 2.1e-41 173.3 131 64.9
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 3.5e-41 172.6 176 54.5
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 3.5e-41 172.6 162 54.9
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 3.5e-41 172.6 175 52.6
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 6.0e-41 171.8 178 56.7
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 7.9e-41 171.4 161 55.9
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 7.9e-41 171.4 166 56.6
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.3e-40 170.6 143 61.5
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.3e-40 170.6 131 63.4
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.3e-40 170.6 131 63.4
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.8e-40 170.2 146 61.0
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.8e-40 170.2 183 53.6
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.8e-40 170.2 179 55.3
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 3.0e-40 169.5 186 53.2
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 6.7e-40 168.3 189 51.3
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 6.7e-40 168.3 158 56.3
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 8.7e-40 167.9 143 60.1
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.1e-39 167.5 143 60.1
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.5e-39 167.2 188 53.2
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.5e-39 167.2 143 60.1
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.5e-39 167.2 143 60.1
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 1.5e-39 167.2 192 51.0
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 2.5e-39 166.4 143 60.1
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 2.5e-39 166.4 143 60.1
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 2.5e-39 166.4 143 60.1
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 2.5e-39 166.4 143 60.1
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 2.5e-39 166.4 143 60.1
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 2.5e-39 166.4 188 50.0
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 3.3e-39 166.0 161 55.3
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 4.3e-39 165.6 159 59.1
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 9.6e-39 164.5 173 54.3
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.6e-38 163.7 128 65.6
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 3.7e-38 162.5 132 63.6
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 4.8e-38 162.2 126 63.5
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 6.3e-38 161.8 134 61.2
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 8.2e-38 161.4 184 52.7
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.1e-37 159.5 130 61.5
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 4.1e-37 159.1 108 70.4
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 4.2e-34 149.1 126 60.3
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 2.1e-33 146.7 125 60.8
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.1e-33 146.7 126 57.1
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 3.0e-32 142.9 124 66.9
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.8e-30 136.3 118 59.3
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 8.2e-30 134.8 132 56.1
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 8.2e-30 134.8 132 56.1
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 8.2e-30 134.8 132 56.1
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 6.1e-25 118.6 83 72.3
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 9.7e-23 111.3 129 45.0
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 4.1e-21 105.9 129 45.7
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 1.0e-19 101.3 129 47.3
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.1e-18 97.8 135 42.2
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.2e-17 94.4 128 40.6
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 7.4e-15 85.1 80 60.0
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.3e-13 79.0 49 67.3
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 7.0e-13 78.6 122 36.1
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 1.5e-07 60.8 141 34.0


User provided reference genes

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