Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.1e-150 536.6 276 100.0
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 7.3e-105 384.4 281 74.7
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 4.9e-101 371.7 289 73.4
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 6.4e-101 371.3 288 72.2
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.2e-100 367.5 288 71.5
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.6e-99 366.7 276 72.5
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 2.7e-99 365.9 286 72.4
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 7.8e-99 364.4 292 70.5
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 7.8e-99 364.4 292 70.5
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 6.6e-98 361.3 304 69.4
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 8.6e-98 360.9 282 73.4
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.5e-97 360.1 281 70.5
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.9e-97 359.8 284 69.7
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 5.6e-97 358.2 277 72.9
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 7.3e-97 357.8 277 72.6
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 3.6e-96 355.5 285 67.7
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 6.2e-96 354.8 286 67.8
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 8.1e-96 354.4 276 70.7
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 1.1e-95 354.0 276 71.0
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.8e-95 353.2 277 70.8
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.3e-95 352.8 280 71.1
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 4.0e-95 352.1 283 69.3
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 4.4e-94 348.6 315 66.0
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 4.4e-94 348.6 279 68.8
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 5.8e-94 348.2 279 72.0
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 9.9e-94 347.4 277 70.8
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.2e-93 346.3 282 70.6
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 2.2e-93 346.3 278 71.9
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.2e-93 346.3 284 66.2
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 2.9e-93 345.9 282 70.6
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 3.7e-93 345.5 284 69.0
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 1.1e-92 344.0 281 69.0
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.9e-92 343.2 276 71.0
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 4.1e-92 342.0 278 67.3
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 5.4e-92 341.7 282 69.9
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 1.2e-91 340.5 286 67.5
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.6e-91 340.1 291 69.8
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 2.7e-91 339.3 279 65.9
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 4.6e-91 338.6 285 69.8
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.3e-90 337.0 276 67.4
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 1.3e-90 337.0 276 68.8
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.3e-90 337.0 283 67.8
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 1.7e-90 336.7 277 69.3
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.7e-90 336.7 280 68.2
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 3.9e-90 335.5 285 68.4
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 3.9e-90 335.5 282 67.7
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 5.1e-90 335.1 277 66.4
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 6.6e-90 334.7 276 67.0
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 6.6e-90 334.7 199 85.4
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 1.5e-89 333.6 284 67.3
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.9e-89 333.2 277 68.2
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.5e-89 332.8 276 69.2
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 5.6e-89 331.6 276 67.8
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 7.3e-89 331.3 287 65.2
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.1e-87 327.4 314 62.7
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.8e-87 326.6 297 60.9
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.8e-87 326.6 282 66.3
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 5.2e-87 325.1 279 67.4
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.2e-86 323.9 288 66.7
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 2.9e-85 319.3 279 64.5
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 2.9e-85 319.3 281 64.1
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 6.4e-85 318.2 198 83.8
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 8.4e-85 317.8 198 82.8
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.1e-84 317.4 413 51.1
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 1.1e-84 317.4 276 64.5
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.1e-84 317.4 290 65.5
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 1.9e-84 316.6 283 64.3
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 4.1e-84 315.5 356 54.2
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.2e-83 313.9 281 64.4
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.6e-83 313.5 283 64.0
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.7e-82 310.1 348 55.2
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 2.3e-82 309.7 202 76.7
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 2.3e-82 309.7 277 63.5
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 5.1e-82 308.5 290 63.4
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.5e-81 307.0 283 61.8
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 2.5e-81 306.2 218 72.5
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 3.6e-80 302.4 194 78.4
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 3.6e-80 302.4 278 62.9
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 4.7e-80 302.0 284 61.3
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 2.6e-78 296.2 280 61.1
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 2.2e-77 293.1 322 55.0
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 4.2e-76 288.9 196 75.5
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.2e-75 287.3 280 61.4
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.3e-74 283.9 282 58.9
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 5.1e-74 282.0 281 60.5
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.1e-73 280.8 301 56.1
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.9e-73 280.0 302 56.0
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 7.3e-73 278.1 195 71.8
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.6e-72 276.9 207 68.6
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 2.1e-72 276.6 307 54.1
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 2.1e-72 276.6 202 70.3
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.8e-71 273.5 281 56.6
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 1.6e-67 260.4 242 64.0
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 3.9e-66 255.8 250 60.0
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 7.4e-65 251.5 224 58.9
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 4.0e-63 245.7 150 83.3
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 8.4e-61 238.0 314 49.0
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.1e-55 219.5 179 69.3
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 9.0e-55 218.0 155 76.1
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 5.5e-52 208.8 129 85.3
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 2.7e-51 206.5 205 62.0
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.3e-50 204.1 125 81.6
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 1.6e-48 197.2 233 49.4
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 2.8e-48 196.4 210 54.8
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.3e-42 176.8 114 80.7
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 8.8e-42 174.9 184 58.2
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.2e-35 154.5 395 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 5.7e-33 145.6 132 59.1
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.3e-24 117.9 74 74.3
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.3e-24 117.9 96 67.7
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 7.0e-23 112.1 73 75.3
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.2e-22 111.3 221 40.7
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 2.6e-22 110.2 281 36.3
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.2e-13 80.5 85 54.1
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 3.6e-11 73.2 261 27.6
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 5.2e-10 69.3 112 42.9
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.4e-09 66.6 61 63.9
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.1e-07 61.6 38 76.3
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 3.1e-07 60.1 37 73.0
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 5.4e-07 59.3 37 75.7
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 5.4e-07 59.3 34 82.4


User provided reference genes

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