Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.3e-286 987.6 484 100.0
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 6.8e-183 644.4 489 66.9
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.6e-182 642.5 488 67.0
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 3.4e-182 642.1 488 67.2
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 6.4e-181 637.9 489 66.3
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 5.1e-178 628.2 491 65.6
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 9.6e-177 624.0 493 65.1
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 2.6e-174 615.9 494 64.2
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.8e-174 614.8 486 64.4
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 4.9e-173 611.7 493 63.9
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 8.4e-173 610.9 499 65.3
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.6e-171 606.7 492 63.8
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 1.5e-169 600.1 485 64.5
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.9e-169 599.7 483 64.4
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.6e-168 596.7 496 62.5
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.3e-167 591.7 482 63.5
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 2.0e-166 589.7 491 63.7
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.7e-165 586.6 478 62.1
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.9e-164 583.2 490 62.9
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.2e-164 582.4 479 62.2
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 4.2e-164 582.0 454 63.9
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 5.4e-164 581.6 490 61.6
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.3e-161 572.4 495 60.4
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.3e-160 570.5 480 62.5
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.5e-158 563.5 482 61.4
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.7e-157 560.1 482 59.5
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 2.2e-157 559.7 474 60.3
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 2.2e-157 559.7 508 58.1
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 3.8e-157 558.9 440 62.5
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.1e-156 557.4 459 61.9
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 1.1e-156 557.4 489 61.3
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 2.4e-156 556.2 498 58.6
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.2e-155 553.9 442 62.0
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 3.5e-155 552.4 500 58.2
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 3.5e-155 552.4 500 58.2
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 5.6e-153 545.0 489 58.7
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.6e-152 543.5 393 67.9
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.6e-152 543.5 430 61.4
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.7e-152 542.3 453 62.3
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 6.2e-152 541.6 430 64.2
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.1e-151 540.8 489 57.3
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 3.1e-151 539.3 383 66.1
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 3.1e-151 539.3 373 68.9
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 3.1e-151 539.3 492 57.3
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 2.6e-150 536.2 473 59.2
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 4.5e-150 535.4 470 58.1
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 4.5e-150 535.4 493 56.0
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 8.4e-149 531.2 476 56.9
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.1e-148 530.8 496 56.0
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.2e-148 528.9 494 56.7
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 5.5e-148 528.5 397 66.2
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 9.3e-148 527.7 489 56.4
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 9.3e-148 527.7 496 55.6
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.6e-147 526.9 512 58.0
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 2.7e-147 526.2 429 63.2
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 4.6e-147 525.4 390 66.4
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 3.9e-146 522.3 471 57.1
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 5.1e-146 521.9 374 66.6
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 2.5e-145 519.6 476 55.7
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 6.3e-144 515.0 443 60.3
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 2.4e-143 513.1 464 58.0
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 2.4e-143 513.1 464 58.0
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 2.4e-143 513.1 464 58.0
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 3.1e-143 512.7 466 59.7
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 6.9e-143 511.5 473 57.5
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 6.9e-143 511.5 476 55.5
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.2e-142 510.8 490 55.7
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.0e-141 507.7 480 56.2
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 3.8e-141 505.8 467 58.0
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 5.0e-141 505.4 495 55.8
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 5.0e-141 505.4 486 56.0
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 8.5e-141 504.6 470 57.4
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.1e-140 504.2 482 55.6
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.4e-138 497.3 479 54.9
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.3e-138 496.5 505 53.3
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 2.3e-138 496.5 477 56.4
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.0e-138 496.1 484 52.5
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 3.9e-138 495.7 477 56.2
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 2.5e-137 493.0 476 55.9
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.3e-136 490.7 422 60.4
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 2.2e-136 490.0 490 54.3
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.4e-135 487.3 477 53.2
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.8e-135 486.9 422 60.0
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 2.6e-134 483.0 450 56.0
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 3.4e-134 482.6 474 53.8
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 4.5e-134 482.3 428 56.3
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-133 480.3 481 53.6
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.1e-132 477.6 487 53.2
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-132 477.6 481 54.3
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.9e-132 476.9 481 53.8
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.2e-132 475.7 483 54.0
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.1e-131 473.4 481 53.6
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 3.7e-128 462.6 486 52.7
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 3.7e-128 462.6 471 53.3
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.4e-127 460.7 361 64.0
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 9.4e-124 448.0 375 58.7
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.9e-117 426.4 491 48.3
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.2e-116 422.9 392 53.1
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.0e-106 389.4 473 48.4
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.3e-104 381.7 410 47.6
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 3.4e-89 333.2 277 62.1
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.2e-80 303.9 493 40.8
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.9e-79 300.8 259 59.1
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.7e-78 297.0 211 63.0
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.6e-75 287.7 314 52.2
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.0e-73 280.8 362 43.6
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.4e-71 274.6 355 44.2
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 1.9e-68 264.2 399 39.3
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.9e-55 221.1 400 37.8
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 4.2e-55 219.9 311 41.5
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 2.5e-44 184.1 222 51.8
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 3.7e-35 153.7 181 49.7
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 4.6e-30 136.7 114 61.4
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.8e-27 127.5 131 51.1
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.1e-26 124.0 420 29.3
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 8.5e-24 115.9 332 32.2
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.4e-21 108.6 53 86.8
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 8.8e-21 105.9 417 28.1
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.8e-18 98.2 227 34.8
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.7e-08 65.1 251 25.5


User provided reference genes

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